LOC122327180 (LOC107593352,LOC107717987,LOC107679830,LOC107593351,LOC107717988,LOC107679833)


Basic Information

Item Value
gene id LOC122327180
gene name LOC107593352,LOC107717987,LOC107679830,LOC107593351,LOC107717988,LOC107679833
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 15220447 ~ 15288892 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222362.1
CGCTGCTTCTCATGACCTCACTCGCTTCAAGTCGCGACGCTTCCAACGGAAAGCGCGTCAACCGTTTGCTAAACTTTACTCTTCGAgataaaatgctacatttatgACTTTCGACCGTAACTTTACCTCGTATCAGgatgAATCTGTTGAAAATTATTTGCTCCAACGTTATTGTCCTCATTCATCACTGCATGGAAAAAGCGGAGGGCAGAGTCCTGCTCACGCACGATGACTATTACCCCGAGTACGTGCCCGATCGACAGCCGTGGGACATTGCCCGCAGCCTCTGCCTCCAGCGTTCGGGGTCCTTCGTGATGATGTCCAGTACCGAGGAGATTCAAAAGCTGAACGGCTTTCTCCGATCCCTAAATATCACCCAACCCGTATGGATCGAAAGTGCAGGCATGTTACAAAAAAGCGGTCCTCCAGACATATACATGCTGGAATTTCCAATGCGCCCCCACCGGAAATCGGCACGCCTCCGCCACAAGTTCCCCGACATGGAAGCGCTTACGGTTTGCGCTTACCTCCAGCTCAACCCCTCTTGCCACGGACTTTCCACGGTCTTCTCGTACGCTGTTCAATCGTTCATCAAAGAATTCCAACTCCAAGCCCAAATCACGGAGAACGAACCGGTCCACCTTGCGTTGCTGGTGCACGGTTCAAACACCTCCTACGTGGCTGGCTTTCCCAACAATGCCTCCTGGCACTTCGTATGCTCTGGCTGGGACGGGAATACCGGGAAGTGGGTCATCTGGGTGGATGGAGCAGTTGTGGGTTCTGGGAATTCCCTCAACTCAACCGGTCGCATCGGAGGCGATGGCCTTTTCATGATCGGACAGGACCAGGAGACCTACGGGggctacaacaacaacaaggcGCTTTGCGGGAAAGTTACGCAGCTGTACATGTGGGATCGTTTCTTGATCGACTCTGAAATCCAAAGCATGGAAAATCTTTGCTCAGCCGTCCCTTTTGGTTTGTTCTTCAAGTGGAACGAGTCCGCTCTGGAAATAGAGATGTCCCTGCAAACACGTAGAGGGAGCTCGCCGTGTCGAGGTTCTAAAATCCAACCACAAGAACAGCTGGTCATCTCTGGTTTGGATCCAAACCTGCATCACAATCTTTCCATCCTTTCTCACAAGACCTGCGAAGCCTTTGACCCTGCGAGTGGAAAACCCATTAGTAGCTTGTGTACCACACAAAGAGGAAGTGTTTGCCTGTTCCCAAAAGAGCAGCTGGACTTTGCTTTTCCTGGAACCTTGTTCTTCTCACAAGTCAGCAGTGAGattcattccaaacctGATATAAATGTAACCTTGTACCCTGAGACCGATCTGACTCGTCATGTTTCCCTCTTGGGTGCCATATTGAGAGTTCTGGACAGCACAGCAGACATCCTCACACATTCTGATCTTCTCTACCTCACAGAAACCATCGATAAGGCCACTCAGTTCAATAAAATAGTACTTTCCACAGATGTCTTCATTTCTATGGTCCGCAGTTGCTTGGAACTAGTCAGCAGGCTCATCAACCCTGACATGGCCAAACAATGGGAGGATCTGATAGCACATGAGAATTACCCTGGACCGTTGACAATGGTGGAGAACATTGACAAATTGCTGTGTATGCTGGCGGATGCTCTCTGGATTGACCGCAAGAGCTTCATAATGTCAACAAAGAACATGAATATTCATCTGGAGCCGCGTAGGCTGACGCCAATGAGCTGCGGTTGTGTGTTCAAGCCCTCGGTTCACAGTGGACAGTTCGGCAGCCATGATGAGATCCTCATACCAGAGTCAGAAATGCAGCGAGTCTTTTCTCTGGGCCACAAGGAAGTGATGGTTATTCATACCTACTACAGTAACCTGTTAGAGATGTTTTCCAGACTGGAGGTGAAAACCCATACTGACCAACAGGAAGACAAGAGGCATCACACTGGTCAACTGGCCACAGCAGTAATCTCGGCAACAGTTCGAGATGTTTCCAGGGAAGAAAATGTTCCTGTCTCTGTCCAGTACACCCTATCCTCTGGGATTATGacAGAGTATTCCAAACAAATCGCTGCCGTCTGCATCTTCTGGAATATCATGGAGGGTCATGCAAGTGGTTGGTCCAAAAAAGGGTGCAGGGTGCTGCCTTCTCCTcctgatgtcacttcctgctTCTGCAATCACACCACCAATTTTGCTGTCCTTATGAATTATATGGAGCACAGGTGGAGTGCTAAAGAGGAGAGCGTTCTGACGAAGCTGACGTTTATCGGATCCGGAGCGTCTCTCTGCGCACTGGTGGTGACCTTGATGCTGTTTACCGTGTTAGAcatCCCAAAATCAGATCGGATATCAGTTCACAAAAATCTTTTTGTGTCTCTGACTTGTGCTCAAATTGTCCTTCTCTGCAGTGGTTCTGCTGTTCATAACAagGTGGCCTGCACGCTCGTGGCCGCTCTGATGCATCTGTTCTTCATGGCAGCGTTCAGCTGGATGCTGGTGGAGGGCCTGCTGCTCTGGAGCAAAGTAGTGAGCGTTAATTTGAGCGAGGACCGGCACATGAAATACTACTACCTGATTGGCTGGGGTCTGCCCGTGCTGATTGTGGCCATCACGCTGGCTTCTGCTGCTGGGAATTACTCAGCGGACGGTCACTGCTGGCTCAGTGTTCAGAACGGAGTCATATGGGGCTTCGCGGGACCCGTCATCTTCATCATTATGGTGAACGTCATGATTCTGACCCGCGTGGTCGTGATCACCATCACCACAGCTAAGAGGAGATCTTTGATGATGACTCTGAACAGCAGTCCAGAGGAGCAGGTCTCGGAGCAGATCAGGGCAGCAGTGAAAGCCGTGCTGGTCCTGCTGCCGATCCTGGGCCTGACGTGGCTCTGCGGCGTCCTGGTGCCCTTCTCCGTGGTGATGGCGTACGTCTTCAGCCTTCTGAACTCGCTGCAGGGCCTCTTCATCTTCCTGATATATGGAGTGTACAACACTGAGGTTCGAAACACAGTCAACAGAatcaaagaaagaagaaaagcctTAAATTTCTCCaactgTGCCAGTTCCAGGCCCTCCAGTTCAGTGGGCAGTTCTCGACCGGGCAGCTCCCCAGGACCAGGTGTTTTGGACGGCCAAACAGTCACTTACTCCAGCAGCTCATCGACCCACAGCGACAACATCACCCAGAGTTACGACAAAACAAGGCATCTGTCCCTCCCCTGTGTCCACGACGACTTAAATGAAGAGCTGCGATGTCCTGACACTGGTGTCCACCTCTCTGGACAGGAGAACTTGAGAAAAGCTAAAGACAGACTTCCGAACGAGTGCAGTCTGAACGTACCCATGGAGGCCGAACTGACGTCCCACTATTCTCCTCCTCAGCAGAACAGAGATGTGTGTCTCCACTGAAACCCATCTTCACGTCTCGTGTTTTGGTAAAGCGCAGTTAGCGTGCGTTTGAtatccttaaagggatagttgacccagaaattacaattctgtcgtaatttattcaccctcacatttttcagcttttattttagttttgcttctgttgctttgttttgttttcctttccgttcctctgcttttgttttatcctccattaaaatgtctgcttttctttcttatgtCTCAAGATCATTTGAAGAGCGCTGGTAAACAAACATTGACTTCTGTAGTATGggcaaaaatgtgtttgatcACCAGtactctttaaaatatctttttggtTCAggtaaatgacataatttttattttt
>XM_043222363.1
CGCTGCTTCTCATGACCTCACTCGCTTCAAGTCGCGACGCTTCCAACGGAAAGCGCGTCAACCGTTTGCTAAACTTTACTCTTCGAgataaaatgctacatttatgACTTTCGACCGTAACTTTACCTCGTATCAGgatgAATCTGTTGAAAATTATTTGCTCCAACGTTATTGTCCTCATTCATCACTGCATGGAAAAAGCGGAGGGCAGAGTCCTGCTCACGCACGATGACTATTACCCCGAGTACGTGCCCGATCGACAGCCGTGGGACATTGCCCGCAGCCTCTGCCTCCAGCGTTCGGGGTCCTTCGTGATGATGTCCAGTACCGAGGAGATTCAAAAGCTGAACGGCTTTCTCCGATCCCTAAATATCACCCAACCCGTATGGATCGAAAGTGCAGGCATGTTACAAAAAAGCGGTTCTAAAATCCAACCACAAGAACAGCTGGTCATCTCTGGTTTGGATCCAAACCTGCATCACAATCTTTCCATCCTTTCTCACAAGACCTGCGAAGCCTTTGACCCTGCGAGTGGAAAACCCATTAGTAGCTTGTGTACCACACAAAGAGGAAGTGTTTGCCTGTTCCCAAAAGAGCAGCTGGACTTTGCTTTTCCTGGAACCTTGTTCTTCTCACAAGTCAGCAGTGAGattcattccaaacctGATATAAATGTAACCTTGTACCCTGAGACCGATCTGACTCGTCATGTTTCCCTCTTGGGTGCCATATTGAGAGTTCTGGACAGCACAGCAGACATCCTCACACATTCTGATCTTCTCTACCTCACAGAAACCATCGATAAGGCCACTCAGTTCAATAAAATAGTACTTTCCACAGATGTCTTCATTTCTATGGTCCGCAGTTGCTTGGAACTAGTCAGCAGGCTCATCAACCCTGACATGGCCAAACAATGGGAGGATCTGATAGCACATGAGAATTACCCTGGACCGTTGACAATGGTGGAGAACATTGACAAATTGCTGTGTATGCTGGCGGATGCTCTCTGGATTGACCGCAAGAGCTTCATAATGTCAACAAAGAACATGAATATTCATCTGGAGCCGCGTAGGCTGACGCCAATGAGCTGCGGTTGTGTGTTCAAGCCCTCGGTTCACAGTGGACAGTTCGGCAGCCATGATGAGATCCTCATACCAGAGTCAGAAATGCAGCGAGTCTTTTCTCTGGGCCACAAGGAAGTGATGGTTATTCATACCTACTACAGTAACCTGTTAGAGATGTTTTCCAGACTGGAGGTGAAAACCCATACTGACCAACAGGAAGACAAGAGGCATCACACTGGTCAACTGGCCACAGCAGTAATCTCGGCAACAGTTCGAGATGTTTCCAGGGAAGAAAATGTTCCTGTCTCTGTCCAGTACACCCTATCCTCTGGGATTATGacAGAGTATTCCAAACAAATCGCTGCCGTCTGCATCTTCTGGAATATCATGGAGGGTCATGCAAGTGGTTGGTCCAAAAAAGGGTGCAGGGTGCTGCCTTCTCCTcctgatgtcacttcctgctTCTGCAATCACACCACCAATTTTGCTGTCCTTATGAATTATATGGAGCACAGGTGGAGTGCTAAAGAGGAGAGCGTTCTGACGAAGCTGACGTTTATCGGATCCGGAGCGTCTCTCTGCGCACTGGTGGTGACCTTGATGCTGTTTACCGTGTTAGAcatCCCAAAATCAGATCGGATATCAGTTCACAAAAATCTTTTTGTGTCTCTGACTTGTGCTCAAATTGTCCTTCTCTGCAGTGGTTCTGCTGTTCATAACAagGTGGCCTGCACGCTCGTGGCCGCTCTGATGCATCTGTTCTTCATGGCAGCGTTCAGCTGGATGCTGGTGGAGGGCCTGCTGCTCTGGAGCAAAGTAGTGAGCGTTAATTTGAGCGAGGACCGGCACATGAAATACTACTACCTGATTGGCTGGGGTCTGCCCGTGCTGATTGTGGCCATCACGCTGGCTTCTGCTGCTGGGAATTACTCAGCGGACGGTCACTGCTGGCTCAGTGTTCAGAACGGAGTCATATGGGGCTTCGCGGGACCCGTCATCTTCATCATTATGGTGAACGTCATGATTCTGACCCGCGTGGTCGTGATCACCATCACCACAGCTAAGAGGAGATCTTTGATGATGACTCTGAACAGCAGTCCAGAGGAGCAGGTCTCGGAGCAGATCAGGGCAGCAGTGAAAGCCGTGCTGGTCCTGCTGCCGATCCTGGGCCTGACGTGGCTCTGCGGCGTCCTGGTGCCCTTCTCCGTGGTGATGGCGTACGTCTTCAGCCTTCTGAACTCGCTGCAGGGCCTCTTCATCTTCCTGATATATGGAGTGTACAACACTGAGGTTCGAAACACAGTCAACAGAatcaaagaaagaagaaaagcctTAAATTTCTCCaactgTGCCAGTTCCAGGCCCTCCAGTTCAGTGGGCAGTTCTCGACCGGGCAGCTCCCCAGGACCAGGTGTTTTGGACGGCCAAACAGTCACTTACTCCAGCAGCTCATCGACCCACAGCGACAACATCACCCAGAGTTACGACAAAACAAGGCATCTGTCCCTCCCCTGTGTCCACGACGACTTAAATGAAGAGCTGCGATGTCCTGACACTGGTGTCCACCTCTCTGGACAGGAGAACTTGAGAAAAGCTAAAGACAGACTTCCGAACGAGTGCAGTCTGAACGTACCCATGGAGGCCGAACTGACGTCCCACTATTCTCCTCCTCAGCAGAACAGAGATGTGTGTCTCCACTGAAACCCATCTTCACGTCTCGTGTTTTGGTAAAGCGCAGTTAGCGTGCGTTTGAtatccttaaagggatagttgacccagaaattacaattctgtcgtaatttattcaccctcacatttttcagcttttattttagttttgcttctgttgctttgttttgttttcctttccgttcctctgcttttgttttatcctccattaaaatgtctgcttttctttcttatgtCTCAAGATCATTTGAAGAGCGCTGGTAAACAAACATTGACTTCTGTAGTATGggcaaaaatgtgtttgatcACCAGtactctttaaaatatctttttggtTCAggtaaatgacataatttttattttt

Function

NR:

description
PREDICTED: adhesion G-protein coupled receptor D2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222362.1 True 3756 mRNA 0.49 25 15220447 15288892
XM_043222363.1 False 3117 mRNA 0.48 24 15220447 15288892

Neighbor

gene id symbol gene type direction distance location
ddx59 ddx59,LOC107717990,LOC107578347 coding upstream 25575 15189827 ~ 15194872 (+)
scamp4 scamp4,LOC107717975,LOC107699425,LOC107719549,LOC107679840,LOC107586414 coding upstream 84851 15130400 ~ 15135596 (+)
ubxn6 LOC107717977,LOC107679838,LOC107593331,LOC107719551,LOC107699423,LOC107586413 coding upstream 100618 15114186 ~ 15119829 (+)
LOC122327882 LOC107679839,LOC107717989,LOC107719633,LOC107699428,LOC107586446 coding upstream 217477 15001033 ~ 15002970 (+)
lmcd1 lmcd1,LOC107662933 coding upstream 254860 14937292 ~ 14965587 (+)
aspm LOC107712224,LOC107699437,LOC107586448,LOC107556171,LOC107577714 coding downstream 447009 15735901 ~ 15752487 (+)
LOC122327224 NA coding downstream 590362 15879254 ~ 15886245 (+)
LOC122327226 LOC107556173 coding downstream 612240 15901132 ~ 15938182 (+)
LOC122327890 NA coding downstream 654841 15943733 ~ 15956310 (+)
LOC122327228 LOC107565915,LOC107709523,LOC107680281,LOC107565908,LOC107706842,LOC107680280 coding downstream 809839 16098731 ~ 16099807 (+)
G153083 NA non-coding upstream 82824 15136335 ~ 15137623 (+)
G153065 NA non-coding upstream 108469 15110215 ~ 15111978 (+)
G153050 NA non-coding upstream 113521 15078846 ~ 15106926 (+)
LOC122327701 NA non-coding downstream 1803 15290695 ~ 15311067 (+)
G153178 NA non-coding downstream 162557 15451449 ~ 15512639 (+)
G153180 NA non-coding downstream 165072 15453964 ~ 15454729 (+)
G153181 NA non-coding downstream 166020 15454912 ~ 15490268 (+)
G153182 NA non-coding downstream 179158 15468050 ~ 15516152 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other upstream 683 15195916 ~ 15219764 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other upstream 431754 14782382 ~ 14788693 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other upstream 528639 14686504 ~ 14691808 (+)
G152767 cp,LOC107572087,LOC107732248 other upstream 757787 14458149 ~ 14462660 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other upstream 907311 14283892 ~ 14313136 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other downstream 334201 15623093 ~ 15712086 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other downstream 715672 16004564 ~ 16035615 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other downstream 788689 16077581 ~ 16078895 (+)
LOC122327131 NA other downstream 874491 16163383 ~ 16171629 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other downstream 1028495 16317387 ~ 16386176 (+)

Expression


Co-expression Network