LOC122327224


Basic Information

Item Value
gene id LOC122327224
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 15879254 ~ 15886245 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222434.1
CTTGTGCACAGAGAGGTCTGTTGTAAGAAAGATTTCTTTTTGACAAGCAGGAAAGAGTTTTAGTGACAGATCAAAACAGGTGCTTGTGAACTGAACTCATAATGAGAGTTACTGTAAAACTCCTCGGATTTGGTTTTTGGTTGCTTTACTTCGATTTTGCGTGCTGTCAAGAATGTCGTCGAGATGACATTAAATTTACTAACACGGAATCGGTTGCAAAAGCTTCATACGCTGATGGCGAAACAATGAAAGTGAACTGCATTACGGGTTTTACTGGCTTGTATAAGTTAAAGTGTGAAAAAGGAGAATGGAAGAAATCCATTCAACGACCATGTGCAAAGAGAAAATGCGGTCACCCAGGCGACCTACAACACGGTGATTTTAAACTTGTGGAGGGGACGGAGTTTGTTTTTGGAGCAACGGTGGCTTATTCTTGCCAGAAAGGGTATGAAATGACGAGCAGAATCAATCAGCGTACCTGCAGAGCTCAAGGATGGGACAATGCTGTTCCCATCTGTGAGGTGGTAAAATGTCCAGCCGTTTACACCGAAAAGGATATAACTGCGTCGGGGGACACAGAGGAGGGAAGTTACGGTGATATTATTCACTTTGAGTGTGCATCTCCTGATAAAATGCTAAATGGAAGTAGTGAAATTCACTGTGAAGAGACTGGAGAATGGAGTGACGTTATTCCAAAGTGCATAGAAATAACTTGCACAGCCCCTGTCATATCACATGGAAAGGTTGTTGAGCCACGGCCGAAATACCTGAAAAATtccatattaaaatacaaatgcgATCCAGGCTTCAAGGCCAAAGAGGGAATCCCAAGATGCGCTAAATCTGGCTGGACTGTGAGCCCAGAATGTGATGAAATAACTTGTGAGCTGAAGTCAACTTCATTTGGAGTGCAAAAGATCAACCCGAAGGGAAAAACAATTTTCAGAGCCGGAGAAAGTGTGGAAATCACCTGCTCTGAAGAATACTTTATCTTTGGTACAAAAGAAGCCAGCAGATCTTTTACATGTCGATATAATGGCCAGTGGGACAATAAGCCTGCTTGTGAAGAGATTACATGTGAAGATCCACGCGACTGGCGTGTGTCTAAACCATACTACTGGCAAATTAAGAAATTTGGAGAAAAACAGTCTTACCGTTGTGAGTCTAGATATCGTGAAACAGCAGAAGTGGCCACATGTACACGAGACGGATGGAAACCAAAACCACTGTGTGCTGATATTACATGCACAGCTCCTGTCATATCAAATGGAAATGTTGTTGAGCCACGGCCAGAATACCACAAAGATGccatattaaaatacagatgTGATTCAGGTTCAAGCTCAGAACTCCCGGGCCATGTTCTCAACTGTGTTGCCAAAGAGGCCAGTTTGGGACACGGGGACCTTGAGGAATCAAACTTTGTAAGCGCTCACATGTTGACCAGACACAGCCATAGCCTAATGGATTGA

Function

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0008015 blood circulation biological_process
GO:0003013 circulatory system process biological_process

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222434.1 True 1472 mRNA 0.43 10 15879254 15886245

Neighbor

gene id symbol gene type direction distance location
aspm LOC107712224,LOC107699437,LOC107586448,LOC107556171,LOC107577714 coding upstream 126767 15735901 ~ 15752487 (+)
LOC122327180 LOC107593352,LOC107717987,LOC107679830,LOC107593351,LOC107717988,LOC107679833 coding upstream 590362 15220447 ~ 15288892 (+)
ddx59 ddx59,LOC107717990,LOC107578347 coding upstream 684382 15189827 ~ 15194872 (+)
scamp4 scamp4,LOC107717975,LOC107699425,LOC107719549,LOC107679840,LOC107586414 coding upstream 743658 15130400 ~ 15135596 (+)
ubxn6 LOC107717977,LOC107679838,LOC107593331,LOC107719551,LOC107699423,LOC107586413 coding upstream 759425 15114186 ~ 15119829 (+)
LOC122327226 LOC107556173 coding downstream 14887 15901132 ~ 15938182 (+)
LOC122327890 NA coding downstream 57488 15943733 ~ 15956310 (+)
LOC122327228 LOC107565915,LOC107709523,LOC107680281,LOC107565908,LOC107706842,LOC107680280 coding downstream 212486 16098731 ~ 16099807 (+)
trnaa-agc_18 NA coding downstream 236195 16122440 ~ 16122512 (+)
trnaa-agc_19 NA coding downstream 240291 16126536 ~ 16126608 (+)
G153236 NA non-coding upstream 42500 15835260 ~ 15836754 (+)
G153231 NA non-coding upstream 48163 15827770 ~ 15831091 (+)
G153233 NA non-coding upstream 65168 15795830 ~ 15814086 (+)
G153244 NA non-coding upstream 77095 15795439 ~ 15802159 (+)
G153239 NA non-coding upstream 111698 15766721 ~ 15767556 (+)
G153320 NA non-coding downstream 94877 15981122 ~ 15981346 (+)
G153321 NA non-coding downstream 96347 15982592 ~ 15982822 (+)
G153364 NA non-coding downstream 364195 16250440 ~ 16250973 (+)
G153399 NA non-coding downstream 417486 16303731 ~ 16305650 (+)
G153418 NA non-coding downstream 534407 16420652 ~ 16481470 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other upstream 167168 15623093 ~ 15712086 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other upstream 659490 15195916 ~ 15219764 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other upstream 1090561 14782382 ~ 14788693 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other upstream 1187446 14686504 ~ 14691808 (+)
G152767 cp,LOC107572087,LOC107732248 other upstream 1416594 14458149 ~ 14462660 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other downstream 118319 16004564 ~ 16035615 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other downstream 191336 16077581 ~ 16078895 (+)
LOC122327131 NA other downstream 277138 16163383 ~ 16171629 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other downstream 431142 16317387 ~ 16386176 (+)
G153432 slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730 other downstream 607457 16493702 ~ 16499413 (+)

Expression


Co-expression Network