LOC122327230 (LOC107574244,LOC106946732)


Basic Information

Item Value
gene id LOC122327230
gene name LOC107574244,LOC106946732
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 16153142 ~ 16155551 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222437.1
ACCACCAaggtcatatattttaaaattacattaaatttcaaTATCACAATGTTGTTGTGCTGTTTCAATACACCTCATGCTCTTCTGCTGTTGTTTCCAGCCTGCCACTGCTACTTTATCACAGGCCACTGCTGCACCTCCACAATCTGAGGCTTCAGACACGGCTCCTGCCCCACGGTCATTCCTGAGGCCCTCTTCTACTTTATCAATGtTCACTAAATCACGGTATAGTGGGTCACAGTTGTCTTCACTAAAGCCCAATTTAGTAGAACGGAAGACCCCCAGCCCTTCTCCATCCTCTGTGAGGACCCCAAGTGCTTCTCCTCCCAGCCCCTCACCTTCTCCATCCTCTGTGAGGACTCTAACCGTGGCCACTGTGAGAACCCCTTGCCCTTCTCCATCCTCTGTGAGGACCCCAAGTGCTTCTCCTCCCAGCCCCTCACCTTCTCCATCCTCTGTGAGGACTCCAACCGTGGCCACTGTGAGAACCCCTCGCCCTTTTCCATCCTCTGTAAGGACGGcaagctcttcttcttcctctccgAGACCTCCCAGCCCATCCTTACTGCAGACCCACGTTCCTGCTCCATTCTCTGAGGAGCCTAGAAGAGTCCAGCCAACCCCTGCCGAGGACTTAGCTTCAGTCAGGCTACCAGTTGAATTAGGCAAGACCATCCCTGTGCAGGACCAAAGGTGGATTGccaacactttatttcactCTGGCAAGCTGCGGCCAGATTTGAAGCTGTGGTATGAGCCTCCCATCCCGGCCCTCATTTACCACCAGACACCAACACCTGACCGGTTCTTTACCCATCGGCTAATGGTGTGGATGCCCTACCACCTGTGGAAGGTGACGGTTCACTGTCCGGCTTGTAACAAGAACCTAACAGGTTATGGTGTCCACAAAGGGGCCAGGAAGGTCCTGGATATTGACAGGTACTACCTGCTGGTGACAGAGACACTCAGGTGTACTGTGTGTTCTCAAAACTATCTGTCAACAAGCCAGACTGTCCGGGACCAGCTCGACCTGCCGCACCAGAAAATGTTCCGGCTGATTCTGACACGCAAgtATGCCTGTGACATCCGTGTCATTAGGCTGCTTCGGGACCGGACGCTAGGCAACAGTCCAGCTCGATTGGAGCGGCAGTTGAAAGAGAACCATGGAGAGGAATGGCTGAATCGGCTGGCACACTATCTTGGGGAGTGTGCTGACTTTGTCGATCGACCCAGCCTGTATCCGGTGGTCTGCCAGGAGCCTCCAGAGCCAATCGACATTCCCACCAGTCGTTGGCTGCTGTCAGTATACGGCAGGGATATCCTCTCCAGAATTGAGCATATAAAAGCCAGCATCACATCCATCTTTGGCAACATCTTAAAGATGGATTCCACAAAAAAGATCACAAAGAAGCTGGCCGGCCATGGACGGGGGACAGCACTCTGGGTAACCTCCATTGGAAATGAGGTTGGCCAGATAGTGACCAGTGTGCTGTCAGTGCAAGAGGGGCCAGGACTGAGCAGAATGGTGGCTGGTGTAATGGAGCGCTACAGCAAGGCTGCCATTCCACCACCAGTGCTGCTTTATGTGGACTGTGGCTGCTGCGTGAGTGATGGAGCGACAAGCAAGCTGCAGACCAGGTTTGGGGAGTGGCCAGACCTTCACATACGGCTGGACATCTGGCACTTTATGAGGAGGCTGGCCGTGGGCTGCACCACCGATGCCCATCCTCTATCCCACCTTCATGGGATGCCTGTCAGCCTGCATTTTTGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107574244

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222437.1 True 1771 mRNA 0.53 5 16153142 16155551

Neighbor

gene id symbol gene type direction distance location
trnaa-agc_28 NA coding upstream 3298 16149772 ~ 16149844 (+)
trnaa-agc_27 NA coding upstream 6005 16147065 ~ 16147137 (+)
trnaa-agc_26 NA coding upstream 7390 16145680 ~ 16145752 (+)
trnaa-agc_25 NA coding upstream 14220 16138850 ~ 16138922 (+)
trnaa-agc_24 NA coding upstream 16950 16136120 ~ 16136192 (+)
LOC122327679 NA coding downstream 78056 16233607 ~ 16237021 (+)
LOC122328055 NA coding downstream 85612 16241163 ~ 16244542 (+)
sec13 sec13,LOC107719942,LOC107557974,LOC107691189,LOC107657312 coding downstream 174174 16329725 ~ 16337118 (+)
grip2b LOC107719945,LOC108436697,LOC107720331 coding downstream 226634 16382185 ~ 16477611 (+)
manf manf,LOC107677041,LOC107691893,LOC107592842,LOC107750980,LOC107567190,LOC107708486 coding downstream 595162 16750713 ~ 16752754 (+)
G153321 NA non-coding upstream 170320 15982592 ~ 15982822 (+)
G153320 NA non-coding upstream 171796 15981122 ~ 15981346 (+)
G153236 NA non-coding upstream 316388 15835260 ~ 15836754 (+)
G153231 NA non-coding upstream 322051 15827770 ~ 15831091 (+)
G153233 NA non-coding upstream 339056 15795830 ~ 15814086 (+)
G153364 NA non-coding downstream 94889 16250440 ~ 16250973 (+)
G153399 NA non-coding downstream 148180 16303731 ~ 16305650 (+)
G153418 NA non-coding downstream 265101 16420652 ~ 16481470 (+)
G153434 NA non-coding downstream 346203 16501754 ~ 16502104 (+)
LOC122327176 NA non-coding downstream 367079 16522630 ~ 16526808 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other upstream 74247 16077581 ~ 16078895 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other upstream 117527 16004564 ~ 16035615 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other upstream 441056 15623093 ~ 15712086 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other upstream 933378 15195916 ~ 15219764 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other upstream 1364449 14782382 ~ 14788693 (+)
LOC122327131 NA other downstream 7832 16163383 ~ 16171629 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other downstream 161836 16317387 ~ 16386176 (+)
G153432 slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730 other downstream 338151 16493702 ~ 16499413 (+)
dock3 dock3,LOC107592830,LOC107691882,LOC107567192 other downstream 445079 16600630 ~ 16749928 (+)
tsc22d2 tsc22d2,LOC107732673,LOC107679060,LOC107701225,LOC107568259,LOC107720398,LOC107551385 other downstream 1243754 17399305 ~ 17419244 (+)

Expression


Co-expression Network