G14214


Basic Information

Item Value
gene id G14214
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 2470195 ~ 2473589 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU15912
ACGAAAAGAAGAGAAAGAGGGAGGGAGGGAAAGAGAGAGCGAGGCAGAGAAAAGGAAGAAGATAGAAAGAAACGACCGTGTAGTGTGAAAGTGATTCTGATGAACGGAGAGCGCGAGCTTCTCTTTTCTTCTCCTCGCGGATTTCAGTCACACCGGGTGAGTTTAACTTTCACAGAAGCGTTCAAACGATGTTTTGTTTAAGTCTACTCTCTTATGTCTGTCAGATATGATACATATAACAACGGAGAAACCGGAGTGATTTAAAACTAAACTTGAGGAGATGCGATAGAGAAGCGAGAGAGTGATGAAAGAATCGTAACTTTTTGTTCGTTCGTTCGCTCGCTACGCTCGCGCGACTCGGTTCTCCTGAATTCATCTAATTGTAGCGCGTGCGCTGTGCGTGTGTTTTCATTTATTTTCGTATCGCGTTGATGTTTGGCGAGCAAGCGTTTCCTTGATCCGCGATGTGTTCGAAGAGATGACTGCTTACCTATACATTTTCCTAGTGAGTTGTACCTTGACATATGTAAAACATTTCTCTGACAGGTATAGTTTTCTTTCCAGCCTTAAGTGTTTATGCAGTAGCCCTGTGGCTTACAAGTTTTAAGTAAATGTGAGATTGATGTGTGCAAGACAAAGTGTTGTGTACCTACAACTGAACTTGTGGTTAAGGGGAAAGGTGTTTTCACAAGCATCTCATGCAACATAAAATGTATTTGTCATTTAACATAAAATATGGTAACAGCCAAATGAACTCTTTTTATTAAAGTTAAATAAATGATTTAATGTTATAAACCTGAATACAATAAGAGACATCAATGGGAGTATAATTTAGTTGGATATAGAGGATAACATTTTTTAAAGTATTTTCTTTGCAATGGCAATGAATGGTGACTGAAGATGTTGCACCTCAAAATGGATGCAAACTCACCATATACAGTCCATAAAAATCCCACACTATATTCCAAGTCTGTTGAAGCCATATGAGAGCGAATGTGCAAGGAGCAGGTCGAAAAGTTTTCATCCACTCATCATTTTGACATCTTCCCTTGCTCTTAATGAGAAAAGTAGTCATTTGTAAACTATTTGGATTTTTTTTAGTTAATTGGTTTATCCAATTCACAAAACCGATCTTAATGATTTTTTCCGGTTCTTGAGTTGGCTCAATAGTCCAGACACAGGAACATCTTCGGTTAAAAACTTTAATTCATATGGCTTCCGAAGACTTATGAGCATATGAGTCATGTGGATGCTTTTATGAGTTATTCTGCATCCCTCTTGAGGTTTGAAAGCATTCAGTCCACATTCATTATAATTGCATGGAAAAGACCAACCTGGAATTTTTGCAAAACATTTTCTTGTATGTCCTGCAGAAAAATAAAATATCATAGAGATGAGCAGGTAATGACACACTTTTAATTTTTGAGCGAACTATCCCATTTTGGCATTGTACAGTGAAATCTGTTTTAAAAAGTGACAAAATGCATACAATAGGAGTTTTTGTGTTACTTGAGTGGTGAACTTACAATACAGTGAAACTCATTGCATTGACTTTAGCACCTGTTCTTTGTGCTTTTCTCTGACTCACTCTGTGATCTGAAAGAATTTGCTTTCTTTTGCTTTTCAACATGTTGTGTGTGAGATTTTGAAAAGTTTTTTTTTTTAAGTTTATGCCAGCAGTTTAATAGTGTCAGAGCCCGCCGTGATTTATGAGCTCTTCTTTTAACGTGTGACAGAATGTTCACATCCAAACTCACATCTGGGGCCGAGGAGAAGTCTGAGCGCGTTACAACATTAAAAACAACAGACTTACTCCACACATGCACAAACAAATGTACGCACGGCTCCTTCTTTATGAAATGAGAAAGGAATGGGCCAGCCCTATTCTGTCTTGAGCTGTTTATGTCTCACAGATCAGCAACATGAGTTTACATGAACTCAAACAAAAGAAGCAGAGACAAGGAAAAACAAACTATTGTCAAACCAGATATTCACGTTCCACCAAAACCAAAACTCCCACTCTGACTCCAGCGGGACTGTGGAGTCTGATCTCAGACGTACAGTAACTGTAATGGAATACGGGAGTGTCTTAATGTGTTTGTGTGTTTGGGTAAACTGCTGTCATTATATTCTTGAGTGCATTTTCCCTGTTGAGTGACAGTGAAATGTGTCTCTGTATATCAACCAACCCTAACCGCAGTATTAGATTGACAGAGTTACTTGCTGGATCTTCTAGTTTATTAATAGTAATGTTTTTATGATTGATAGAATGGCCCTTTGCTTTTTGCATGTATATGAATAAATGAATGTTTTCATGAAGACATGCATGGTTAGACCACCCTACTGTCTGTCAATCTGTCTAGTTCCCGATTTTACTTCAGTCTTCATAGCTAATCTGGCAGCTTTCTGACTTGGAATCGTAAATCCAGGAGTTTATCCCTTACTCTCTCAGGAATTTTGGGGGGCAATTAAATATAAATGTCAGGGAGGGGCTGAACAGGTGGTTTATGGGGGTTCTGGGAAGGTGGAGGGGACTTTGTTCTGTACTCTGTAATTATGAAGGAAACCATCAGATCACTATTTCCCTTGTATATTTTTGCAGGTGTGCAGGGATGTATCTCTTTGACTGCATGTGTATATAAGACTTGATATGTCAGGCTGTGTGTGTGTGTGAAGGGGAGAGAGTGTCCGGCATCTGCTTATGGAAGTTCCTGTGTGTGTCAGGGCTTTTATTAATGTGTGTTAGTGTGTGTTTATACTCACAAGCGTGAATGCTTCCCAGTGCCAGTGCTACTGTAATGAGCGCCATCTATTACCTTCTATTGCCCTGATTAAATAAACTGCGTTCATCTGAAATGGCTAGTTTAGCTCAGAGGCCATGTCATTTGTTTTTATAAATCTGATTTCTTGTCTGATTACGCTACGTAATAAACCACAACTACAATCTAGCGGCGATCATGTTAATGCTCTGATCCTTAACCAATTATTTAACCTCGTTCCCCACAGAGGAATACTACATACTGCGGGCATAAATAAGCTCACTGGTCGTGTTCGCTTTCTCTCTGTTCAGACGTTTTATGGGTCTGTAGAAACGTGTATTTTTTATGTTGTTTATTCGTACTTGCAATGTGCCTGCGCTCATCTTGTCCACATCACATTGCGGAACAGAACTGTCAGAACAGTCTTTCGTCCACTTTATTTATCCCATCACTCTTTCCACTGCTCTCTCTCGGTCTTCCATGTGTCACAACCACGTGCAAACCTCTGAAGTTTGGTTATTTATTTATTTATAAAAAGAAGAAGAAGAAGAAAAAGAACTTAGAATCAAAGAATCCAAGTAACAAGTGGGACTTACACCTGTGTTAATTATTTAAAAACCTTTTTTTGGGAGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15912 True 3395 lncRNA 0.43 1 2470195 2473589

Neighbor

gene id symbol gene type direction distance location
CI01000001_02416674_02429967 RARG coding downstream 39588 2415850 ~ 2430607 (-)
CI01000001_02343039_02351117 HOXC13, HOXC13BA, HOXC13A, HOXC13AA, HOXC13AB coding downstream 119078 2342242 ~ 2351117 (-)
CI01000001_02339253_02340813 HOXC12AB, HOXC12A, HOXC12AA, HOXC12BA, HOXC12 coding downstream 129382 2339253 ~ 2340813 (-)
CI01000001_02327669_02329891 HOXC11, HOXC11AA, HOXC11AB, HOXC11A coding downstream 140304 2327669 ~ 2329891 (-)
CI01000001_02318724_02321379 HOXC10A coding downstream 148816 2318724 ~ 2321379 (-)
CI01000001_02510977_02523145 GDAP1L1 coding upstream 37245 2510834 ~ 2523145 (-)
CI01000001_02547325_02557711 TUBA1C, TUBA1B, TUBA1A, TUBA1D coding upstream 73606 2547195 ~ 2557725 (-)
CI01000001_02570315_02577096 PMELB coding upstream 96400 2569989 ~ 2577122 (-)
CI01000001_02581454_02591012 CCNT1 coding upstream 107725 2581314 ~ 2591012 (-)
CI01000001_02641721_02653037 ACP1 coding upstream 167957 2641546 ~ 2653037 (-)
G14344 NA non-coding downstream 66447 2403177 ~ 2403748 (-)
G14194 NA non-coding downstream 71277 2398155 ~ 2398918 (-)
G14335 NA non-coding downstream 102088 2367858 ~ 2368107 (-)
G14304 NA non-coding downstream 315312 2154382 ~ 2154883 (-)
G14301 NA non-coding downstream 318739 2151126 ~ 2151456 (-)
G14445 NA non-coding upstream 150718 2624307 ~ 2624520 (-)
G14458 NA non-coding upstream 188699 2662288 ~ 2662712 (-)
G14383 NA non-coding upstream 284478 2758067 ~ 2839789 (-)
G14492 NA non-coding upstream 414235 2887824 ~ 2888448 (-)
CI01000001_03213566_03220085 NA non-coding upstream 744623 3213274 ~ 3220866 (-)
CI01000001_02258523_02262621 NA other downstream 172983 2258442 ~ 2263103 (-)
G14228 NA other downstream 413717 2055974 ~ 2056478 (-)
G14219 NA other downstream 475297 1994210 ~ 1994898 (-)
G14104 NA other downstream 702737 1763669 ~ 1771468 (-)
CI01000001_00362143_00378213 NA other downstream 2073062 361614 ~ 378213 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 1918725 4392314 ~ 4399804 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other upstream 2002695 4468209 ~ 4523431 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other upstream 2095493 4725927 ~ 4728210 (-)
G15736 NA other upstream 2327312 4800901 ~ 4801395 (-)
G16332 NA other upstream 2477100 4950689 ~ 4957842 (-)

Expression


Co-expression Network