LOC122327307


Basic Information

Item Value
gene id LOC122327307
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5016091 ~ 5021442 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222572.1
GGGTGGACCTCAGTTCTTCTAGAGGTGCcggaaaatagttttttacattttaaatgttcaaaattcaaattgaaTGAAGTAAATGTATGTGCCTtgattttgtctgtttttgttattgtctCGGTCTACGTTACACTTGCGTTGCTGTTTTAGAATGCCAAGCAATTAATCCAACAAATGAATCCAATTgagacaacatttattttggatctGTGTGGACCCAGCAACTGCATATCTAGTTTAACTTTCCCCATCCGCAATCGAAACTATTAGAATACTTCAAGATGAtgcttatttttaagttaagcCTCCATTTGTTTAGCATTTGTTTCTGATTTTGGCAGATCTTTATGAAAGAAGACCGAAAACATGACTGCTCCAGAACCATGTGGAATAAAACAGGAAGATACTGAACAACAAATAGaCCTGGTAGAGAACAGGGAGAGTGAAGAGGGGGAGAACCATCATGTCAAAACTGAAGAAACCTCCTGGAAACATCCTTCATTCAAGCAAAATTTGGATATTAACACGAAAAGTCATCTTGAAGGGAAGCAATATGCTTGTGATCCGTGTGAAAAGACTTTCCCAATAAAACGTAACCTTACGAAACACATAAAtttccacactggagagaagccacATGCTTGTGAACATTGTGGGAGGAGATTCAGGCGAAAAGAATACCTTAATGCACACCTAAaaatccacactggagagaagccgtaCACATGTGGTCAGTGTAAGAAGAGTTTCAGACAAAAATCTGCCCTTAATGTacacatgaggatccacactggagaaaaaccaTACACATGTGAAcaatgtggaaagagtttcagacTCAAGCAACCCCTTAACAAtcacatgaggatccacactggagagaagttATATACATGTGATCAGTGTAGGAAGAGTTTCAGACTTAAGCAAAGTCTTGACAGGCACATTATGATCCATACAGGAGAGAAGCCGCACACATGTgttcagtgtggaaagagtttcacacgaaaagaaaactttaatgCACATCTTAAAACCCACAGTGGAGAGAAGTTGTACACATGTAATCATTGTGGAAGGAATTTCAGTAAATACTATAGTTTTAAATTACATCTGCTTGTTCATTCTAGTGAAGGACTAAAGAACTGTAACCAAAGCAGTAGAGAATTTTTTAGGGCAGGTTTCCTGAAGGACCACCTGAAAGTTACAACAGACAAACCTCATGTATGTTATTtatgtggaaagagttttagtCAGATGGTTGCACTAAAGATACACCAGAAAAGACACAGTGGTGTAAAGGATCATTCTTGTTCTGAGTGTGATAAGAcattttttacagatgctgaACTAAAAGTGCACCAGACAGTTCACTCTACAGAAACGCCttacaagtgttcacactgtgacaagagaTTCAAACGGTCAGGATATCTGCAAATACATGAGcggatccacactggagagaagccgtaTACATGTGATCAGTGTGGGACAAGCTTCAGACTAAAAGAACTGCTTAATGAACACATGTacatccacactggagagaaacctcCCACATGTGAACACTGTGGGAAGAACTTTAAGCAAAAAGCACACCTTGATAGACACATGAGactccacactggagagaatcTACACACATGTGATCAGTGTGGGAAGGGTTTCTTAGAGAAAGGAAACCTTAAAGACCACATGAatatccacaccggagagaggcCGTACTCATGTGATGAATGTGGGAAGAGTTAcaaaaataatggaaaccttttagTGCACAAGAAAAGCCACACTGGGAAGAAGCCACACACATGTGctcagtgtgggaagagttttgCAGAAAAGGCAATCCTTAATGAacacatgaggatccacactggagagaggCCATACACGTGtgatcagtgtgggaagagtttcaccCAAAGAGGAGCTCTTATTACACACAAGAGAACCCACAGTGAAGAGAAACCATATATCTGtgatcagtgtgggaagagttttaAGCAAAAAGAAAGTCTTTGTGATCACATGAaaatccacactggagagaaaccataCACATGCgatcagtgtgggaagagttttgTACGAAGAGTAAGCTTTTATCTACACAAGAGAACccacactggagaaaaaccaTACTCCTGtgatcagtgtgggaagagtttcaggCAAAAAAGAAGCCTTCACGATCACATGACAATCCATACTGGAGAGAAACCTAATACCTGTGATCAGTGTGGGAAAAGTTTCAAACGAAAAGAAAAACTTCATGAtcacatgaggatccacactggagaaaaaccaTACGTATGTGATCAGTGTGGGGAGAGCTTCAGACTAAAAGAAATTCTTAATCGacacatgaggatccacactggagagaggCCTTACGCATGTACACAATGTCATAGGAGTTTCAGACTAAAAGAAATTCTTAATCGACATATgaggatccacactggagagaggCCGTACACGTGtgatcagtgtgggaagagtttcaccCAAAGAGGAGCTCTTATTACACACAAGAAAACCCACAGTGAAGAGAAACCGTATATCTGtgatcagtgtgggaagagttttaAGCAAAAAGAAAGTCTTTGTGATCACATTAatatccacactggagagaaaccatacacatgtgatcagtgcgggaTGAGATTTGTACGAAGAGTAAGCTTTTATCAACACAAGAAAacccacactggagagaaaccatattcctgtgatcagtgtgggaagagtttcagaagaaaaagaaacctTCATGATCACAAGACagtccacactggagagaaaccatatacctgtgatcagtgtgggaagactttcagaagaaaaagaaatcttcATGTTCACATGAcaatccacaccggagagaaaccatATTCCTGTGATCAGTGTGGGGAGAGTTTCAGACAAAAAAGAAGCCTTCATGATCACATGAcaatccacactggagagaaaccataTACGTGTGATCAGTGTGGGAGGAGTTTCAAACGGAAAGCTAAACTTCATGAtcacatgaggatccacaccggagagaaaccatACACATGTGAACAATGTGGGAGGAGTTTCAGACTAAAAGAAATGCTTAATCGACACATGATTATCCACACCAGAGAGACGCCTTACTCGTGTGATCaatgtgggaagagtttcaagAATTTAAGTTTTCTTAAAGTACATCTGCATACTCATTCTAGAGAAAGACCGTCTAATTCTAACCAGCGCAGTAGAAAAAAACTTAGGGAATGTTTAAATTATCACCAGAAAAGACACAGCGGTGTGAAGGATCATGCTTGCGCTCAGTGTGGGAAGACTTTTTTTACGTATGGTGCAATGAAAGTGCACCAAATAGTTCACTCTACAGAAAGGCCttacaagtgttcacactgtgacCAGAGATTCAAACGATCAACACATCTACAGATACATGAGAGGATCCACCCTGGAGAGAAGCTCCATCACTGCCATTcatgtgggaagagtttcactCAGTTATCTTCTCTAATCTCTCATAAATTACATGTCTGCGTGTCTAAAATTACAGTAAGTAGTTCAAGTTCTGATCCTGTTCTTCCAGGTGCGAGATAGGGCTGCATCAAGTTATCATTCTGATAATCGAATAATTAGaaattattagaatgattaatCAATCAATTGTTGATTATTTAGCAGATTATTCCGTatctttattgatttatttggattttggagatgaaaatattgttatacccattctaattaataaataaaacgatgaAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222572.1 True 3795 mRNA 0.40 2 5016091 5021442

Neighbor

gene id symbol gene type direction distance location
asic1b asic1b,asic1,LOC107569540,LOC107727129 coding downstream 185592 4790547 ~ 4830499 (-)
smarcd1 smarcd1,LOC107698569,LOC107694342 coding downstream 230876 4777983 ~ 4785215 (-)
gpd1b gpd1b,LOC107698578,LOC107721242,LOC107727040,LOC107694423,LOC107566434 coding downstream 238878 4773807 ~ 4777213 (-)
LOC122327538 NA coding downstream 243348 4770578 ~ 4772743 (-)
LOC122328160 NA coding downstream 248563 4760030 ~ 4767528 (-)
LOC122327494 NA coding upstream 38756 5060198 ~ 5071072 (-)
LOC122327526 NA coding upstream 63398 5084840 ~ 5086512 (-)
LOC122328166 NA coding upstream 85911 5107353 ~ 5108551 (-)
LOC122327498 LOC107740712,LOC107755677 coding upstream 87318 5108760 ~ 5110661 (-)
LOC122327332 NA coding upstream 92725 5114167 ~ 5123251 (-)
G149962 NA non-coding downstream 12402 4991610 ~ 5003689 (-)
G149963 NA non-coding downstream 16915 4991961 ~ 4999176 (-)
LOC122327586 NA non-coding downstream 50318 4957401 ~ 4965773 (-)
G149956 NA non-coding downstream 76252 4939435 ~ 4939839 (-)
G149594 NA non-coding downstream 335015 4679919 ~ 4681076 (-)
G150000 NA non-coding upstream 119805 5141247 ~ 5142179 (-)
LOC122327581 NA non-coding upstream 139930 5161372 ~ 5167342 (-)
G150008 NA non-coding upstream 156247 5177689 ~ 5181252 (-)
G150017 NA non-coding upstream 179880 5201322 ~ 5204007 (-)
G150025 LOC107683790,LOC107563976,LOC107744761 non-coding upstream 197393 5218835 ~ 5226874 (-)
LOC122327545 NA other downstream 279231 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 427669 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 529166 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 582591 4428805 ~ 4433500 (-)
LOC122327462 LOC107741386,LOC107698560 other downstream 734323 4272551 ~ 4281768 (-)
LOC122327354 NA other upstream 124484 5145926 ~ 5153856 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 505788 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 517114 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 616696 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 640299 5661741 ~ 5672809 (-)

Expression


Co-expression Network