LOC122327308


Basic Information

Item Value
gene id LOC122327308
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5336724 ~ 5351569 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222573.1
CACATCTACAGATACATGAGAAGATCCACCCTGGAGAGAAGCTGCATCACTGCCATTcatgtgggaagagtttcactCAATTATCTTCTCTAATCTCTCATAAATTACACGTCTGCATGTCTAGAATTACAATCTTTATGAAAGAAGACCGAAAACATGACTGCTCCAGAACCATGTGGAATAAAACAGGAAGATACTGAACAACAAATAGaCCTGGTAGAGAACAGGGAGAGTGAAGAGGGGGAGAACCATCATGTCAAAACTGAAGAAACCTCCTGGAAACATCCTTCATTCAAGCAAAATTTGGATATTAACACGAAAAGTCATCTTGAAGGGAAGCAATATGCTTGTGATCCGTGTGAAAAGACTTTCCCAATAAAACGTAACCTTACGAAACACATAAAtttccacactggagagaagccacATGCTTGTGAACATTGTGGGAGGAGATTCAGGCGAAAAGAATACCTTAATGCACACCTAAaaatccacactggagagaagccgtaCACATGTGGTCAGTGTAAGAAGAGTTTCAGACAAAAATCTGCCCTTAATGTacacatgaggatccacactggagaaaaaccaTACACATGTGAAcaatgtggaaagagtttcagacTCAAGCAACCCCTTAACAAtcacatgaggatccacactggagagaagttATATACATGTGATCAGTGTAGGAAGAGTTTCAGACTTAAGCAAAGTCTTGACAGGCACATTATGATCCATACAGGAGAGAAGCCGCACACATGTgttcagtgtggaaagagtttcacacgaaaagaaaactttaatgCACATCTTAAAACCCACAGTGGAGAGAAGTTGTACACATGTAATCATTGTGGAAGGAATTTCAGTAAATACTATAGTTTTAAATTACATCTGCTTGTTCATTCTAGTGAAGGACTAAAGAACTGTAACCAAAGCAGTAGAGAATTTTTTAGGGCAGGTTTCCTGAAGGACCACCTGAAAGTTACAACAGACAAACCTCATGTATGTTATTtatgtggaaagagttttagtCAGATGGTTGCACTAAAGATACACCAGAAAAGACACAGTGGTGTAAAGGATCATTCTTGTTCTGAGTGTGATAAGAcattttttacagatgctgaACTAAAAGTGCACCAGACAGTTCACTCTACAGAAACGCCttacaagtgttcacactgtgacaagagaTTCAAACGGTCAGGATATCTGCAAATACATGAGcggatccacactggagagaagccgtaTACATGTGATCAGTGTGGGACAAGCTTCAGACTAAAAGAACTGCTTAATGAACACATGTacatccacactggagagaaacctcCCACATGTGAACACTGTGGGAAGAACTTTAAGCAAAAAGCACACCTTGATAGACACATGAGactccacactggagagaatcTACACACATGTGATCAGTGTGGGAAGGGTTTCTTAGAGAAAGGAAACCTTAAAGACCACATGAatatccacaccggagagaggcCGTACTCATGTGATGAATGTGGGAAGAGTTAcaaaaataatggaaaccttttagTGCACAAGAAAAGCCACACTGGGAAGAAGCCACACACATGTGctcagtgtgggaagagttttgCAGAAAAGGCAATCCTTAATGAacacatgaggatccacactggagagaggCCATACACGTGtgatcagtgtgggaagagtttcaccCAAAGAGGAGCTCTTATTACACACAAGAGAACCCACAGTGAAGAGAAACCATATATCTGtgatcagtgtgggaagagttttaAGCAAAAAGAAAGTCTTTGTGATCACATGAaaatccacactggagagaaaccataCACATGCgatcagtgtgggaagagttttgTACGAAGAGTAAGCTTTTATCTACACAAGAGAACccacactggagaaaaaccaTACTCCTGtgatcagtgtgggaagagtttcaggCAAAAAAGAAGCCTTCACGATCACATGACAATCCATACTGGAGAGAAACCTAATACCTGTGATCAGTGTGGGAAAAGTTTCAAACGAAAAGAAAAACTTCATGAtcacatgaggatccacactggagaaaaaccaTACGTATGTGATCAGTGTGGGGAGAGCTTCAGACTAAAAGAAATTCTTAATCGacacatgaggatccacactggagagaggCCTTACGCATGTACACAATGTCATAGGAGTTTCAGACTAAAAGAAATTCTTAATCGACATATgaggatccacactggagagaggCCGTACACGTGtgatcagtgtgggaagagtttcaccCAAAGAGGAGCTCTTATTACACACAAGAAAACCCACAGTGAAGAGAAACCGTATATCTGtgatcagtgtgggaagagttttaAGCAAAAAGAAAGTCTTTGTGATCACATTAatatccacactggagagaaaccatacacatgtgatcagtgcgggaTGAGATTTGTACGAAGAGTAAGCTTTTATCAACACAAGAAAacccacactggagagaaaccatattcctgtgatcagtgtgggaagagtttcagaagaaaaagaaacctTCATGATCACAAGACagtccacactggagagaaaccatatacctgtgatcagtgtgggaagactttcagaagaaaaagaaatcttcATGTTCACATGAcaatccacaccggagagaaaccatATTCCTGTGATCAGTGTGGGGAGAGTTTCAGACAAAAAAGAAGCCTTCATGATCACATGAcaatccacactggagagaaaccataTACGTGTGATCAGTGTGGGAGGAGTTTCAAACGGAAAGCTAAACTTCATGAtcacatgaggatccacaccggagagaaaccatACACATGTGAACAATGTGGGAGGAGTTTCAGACTAAAAGAAATGCTTAATCGACACATGATTATCCACACCAGAGAGACGCCTTACTCGTGTGATCaatgtgggaagagtttcaagAATTTAAGTTTTCTTAAAGTACATCTGCATACTCATTCTAGAGAAAGACCGTCTAATTCTAACCAGCGCAGTAGAAAAAAACTTAGGGAATGTTTAAATTATCACCAGAAAAGACACAGCGGTGTGAAGGATCATGCTTGCGCTCAGTGTGGGAAGACTTTTTTTACGTATGGTGCAATGAAAGTGCACCAAATAGTTCACTCTACAGAAAGGCCttacaagtgttcacactgtgacCAGAGATTCAAACGATCAACACATCTACAGATACATGAGAGGATCCACCCTGGAGAGAAGCTCCATCACTGCCATTcatgtgggaagagtttcactCAGTTATCTTCTCTAATCTCTCATAAATTACATGTCTGCGTGTCTAAAATTACAGTAAGTAGTTCAAGTTCTGATCCTGTTCTTCCAGGTGCGAGATAGGGCTGCATCAAGTTATCATTCTGATAATCGAATAATTAGaaattattagaatgattaatCAATCAATTGTTGATTATTTAGCAGATTATTCCGTatctttattgatttatttggattttggagatgaaaatattgttatacccattctaattaataaataaaacgatgaAATCA
>XM_043222575.1
ATCTGCTCATCCAACCACACAGGAATTTACCAACAGTTCAGCTTCTGCCACAACAGTTTATGAAAGAAAGCTGAAAACATGACTGATCCAGAAGCCTGTGGAATAAAACAGGAAGATACTGAACAACAAATAGacCTGATAGAAGAGAGCAAGGAGATTAAGGAACTGATTCAAGAAGGGGGAAACCATCATGTCAAAACTGAAGAAACATCATGGAGTTCTCAATTGAAACGAAAAGGCAAAATATGGCCTCAGAGTGAAAAGAGTGTCTTCTGCAAGCAAAATTCTGGTATTCACATCAAATGTCATCCTGAAGGTCAGCTGTACACATGTGATCAGTGCGAAAAGACTTTCACAATTAAAGGAAACCTTACAAAACACATGAATATCCACACTGGAAAGAAGCCATGCACATGTGATCaatgtgggaagagtttcataCATAAAGGGGCACTTAATAGACACATGATGATCCataccggagagaagccttacacaTGCAATCAGTGTGGGAAGAATTTCAGACTTCAGCAATCTCTTAAAGAGCACATGAGGAtacacactggagagaagccgtaCACATGTGAACaatgtgggaagagtttcagaCTTCAGCAACCTCTTAACGAacacatgaggatccacaccggagagaagccgtacaCATGTGGTCAGTGCAGAAAGAGCTTCCGAAAAAAAGTGAGTCTTAAAACTCACATTAAtctccacactggagagaagcaaTACACATGCGGCCAATGTGGAAAGAGCTTCAGACAAAAAACTACTCTTAACAAACATACCAGGATCCACACTGAAGAGAAGCCTTACACATGTGaccagtgcgggaagagtttcagaCGAAAAGAAGACCGTGATATGCACTTAAAAacccacactggagagaaaccataCACATGCGATCAATGTGGGAAGAGCTTCACAAGAAAAGGAGCCCTTAACATACACATGTGCATCCACACCGGGGATAAGCCACACACATGTGATCAATGTGGGAAGAGCTTCAGACGAAAAGAAAACCGTGATGAACACTTAAAAaaccacactggagagaaaccataCACATGTGATCAGTGTGGGAAAAGTTTCACAAAAAAAGGAGCCCTTAACGTACACATGtggatccacactggagagaagccatACACATGCGGTCAGTGTTCGAAGAGCTTCAGACTGCAATCTAccctaaaaaaacacacaaggatccacactggagagaagccgtaCAAATGTGAACACTGTGAAAAGAGTTTCACACAAAAAGGAGCCCTTAACATACACGTGtggatccacactggagagaagccatACACATGCGATCAGTGTTGGAAAAGCTTCAGACTAAAATCTACCCTTAAAAAACACATAAGGATCCACACTTGAGAAGCTGTACACTGTGATCACCTTGGAATCAGAAAGACTAGAAAATCGTGACCAAAGCAGTAGAAAATCTTTTAGGGCAAATTTTCTGGAGGACCACCTGAAACTGTACATATGTTATTAATGTGGAAAGTGTTTTAGTCAGTTGGTTGTATTAAAGAGACACAGCGGCGTAAAGGATGCTTGAGTGTGGGTAGACATCAGATTTATCAGTATTCTTATTGATTGTGTCGGTTTTGGAGTTGCAAATTAAGTGATTTCCTTCAATGAAATCCTTCAAAGTTTTGTGACAGTGCCTTTCTAATAAACTTTGAGTAAACTGAA
>XM_043222576.1
AGGTGGCGGTAAAGCACTAATAAGTATGCCGTCCGCcgtagaagaagaagaagaagaaaactaGAAGGAAAAGTACACACCACTAGGCTAGCCCCATAACACTGAGATCTTTATGAAAGAAGACCGAAAACATGACTGCTCCAGAACCATGTGGAATAAAACAGGAAGATACTGAACAACAAATAGaCCTGGTAGAGAACAGGGAGAGTGAAGAGGGGGAGAACCATCATGTCAAAACTGAAGAAACCTCCTGGAAACATCCTTCATTCAAGCAAAATTTGGATATTAACACGAAAAGTCATCTTGAAGGGAAGCAATATGCTTGTGATCCGTGTGAAAAGACTTTCCCAATAAAACGTAACCTTACGAAACACATAAAtttccacactggagagaagccacATGCTTGTGAACATTGTGGGAGGAGATTCAGGCGAAAAGAATACCTTAATGCACACCTAAaaatccacactggagagaagccgtaCACATGTGGTCAGTGTAAGAAGAGTTTCAGACAAAAATCTGCCCTTAATGTacacatgaggatccacactggagaaaaaccaTACACATGTGAAcaatgtggaaagagtttcagacTCAAGCAACCCCTTAACAAtcacatgaggatccacactggagagaagttATATACATGTGATCAGTGTAGGAAGAGTTTCAGACTTAAGCAAAGTCTTGACAGGCACATTATGATCCATACAGGAGAGAAGCCGCACACATGTgttcagtgtggaaagagtttcacacgaaaagaaaactttaatgCACATCTTAAAACCCACAGTGGAGAGAAGTTGTACACATGTAATCATTGTGGAAGGAATTTCAGTAAATACTATAGTTTTAAATTACATCTGCTTGTTCATTCTAGTGAAGGACTAAAGAACTGTAACCAAAGCAGTAGAGAATTTTTTAGGGCAGGTTTCCTGAAGGACCACCTGAAAGTTACAACAGACAAACCTCATGTATGTTATTtatgtggaaagagttttagtCAGATGGTTGCACTAAAGATACACCAGAAAAGACACAGTGGTGTAAAGGATCATTCTTGTTCTGAGTGTGATAAGAcattttttacagatgctgaACTAAAAGTGCACCAGACAGTTCACTCTACAGAAACGCCttacaagtgttcacactgtgacaagagaTTCAAACGGTCAGGATATCTGCAAATACATGAGcggatccacactggagagaagccgtaTACATGTGATCAGTGTGGGACAAGCTTCAGACTAAAAGAACTGCTTAATGAACACATGTacatccacactggagagaaacctcCCACATGTGAACACTGTGGGAAGAACTTTAAGCAAAAAGCACACCTTGATAGACACATGAGactccacactggagagaatcTACACACATGTGATCAGTGTGGGAAGGGTTTCTTAGAGAAAGGAAACCTTAAAGACCACATGAatatccacaccggagagaggcCGTACTCATGTGATGAATGTGGGAAGAGTTAcaaaaataatggaaaccttttagTGCACAAGAAAAGCCACACTGGGAAGAAGCCACACACATGTGctcagtgtgggaagagttttgCAGAAAAGGCAATCCTTAATGAacacatgaggatccacactggagagaggCCATACACGTGtgatcagtgtgggaagagtttcaccCAAAGAGGAGCTCTTATTACACACAAGAGAACCCACAGTGAAGAGAAACCATATATCTGtgatcagtgtgggaagagttttaAGCAAAAAGAAAGTCTTTGTGATCACATGAaaatccacactggagagaaaccataCACATGCgatcagtgtgggaagagttttgTACGAAGAGTAAGCTTTTATCTACACAAGAGAACccacactggagaaaaaccaTACTCCTGtgatcagtgtgggaagagtttcaggCAAAAAAGAAGCCTTCACGATCACATGACAATCCATACTGGAGAGAAACCTAATACCTGTGATCAGTGTGGGAAAAGTTTCAAACGAAAAGAAAAACTTCATGAtcacatgaggatccacactggagaaaaaccaTACGTATGTGATCAGTGTGGGGAGAGCTTCAGACTAAAAGAAATTCTTAATCGacacatgaggatccacactggagagaggCCTTACGCATGTACACAATGTCATAGGAGTTTCAGACTAAAAGAAATTCTTAATCGACATATgaggatccacactggagagaggCCGTACACGTGtgatcagtgtgggaagagtttcaccCAAAGAGGAGCTCTTATTACACACAAGAAAACCCACAGTGAAGAGAAACCGTATATCTGtgatcagtgtgggaagagttttaAGCAAAAAGAAAGTCTTTGTGATCACATTAatatccacactggagagaaaccatacacatgtgatcagtgcgggaTGAGATTTGTACGAAGAGTAAGCTTTTATCAACACAAGAAAacccacactggagagaaaccatattcctgtgatcagtgtgggaagagtttcagaagaaaaagaaacctTCATGATCACAAGACagtccacactggagagaaaccatatacctgtgatcagtgtgggaagactttcagaagaaaaagaaatcttcATGTTCACATGAcaatccacaccggagagaaaccatATTCCTGTGATCAGTGTGGGGAGAGTTTCAGACAAAAAAGAAGCCTTCATGATCACATGAcaatccacactggagagaaaccataTACGTGTGATCAGTGTGGGAGGAGTTTCAAACGGAAAGCTAAACTTCATGAtcacatgaggatccacaccggagagaaaccatACACATGTGAACAATGTGGGAGGAGTTTCAGACTAAAAGAAATGCTTAATCGACACATGATTATCCACACCAGAGAGACGCCTTACTCGTGTGATCaatgtgggaagagtttcaagAATTTAAGAAACCTTACAAAACACATGAATATCCACACTGGAAAGAAGCCATGCACATGTGATCaatgtgggaagagtttcataCATAAAGGGGCACTTAATAGACACATGATGATCCataccggagagaagccttacacaTGCAATCAGTGTGGGAAGAATTTCAGACTTCAGCAATCTCTTAAAGAGCACATGAGGAtacacactggagagaagccgtaCACATGTGAACaatgtgggaagagtttcagaCTTCAGCAACCTCTTAACGAacacatgaggatccacaccggagagaagccgtacaCATGTGGTCAGTGCAGAAAGAGCTTCCGAAAAAAAGTGAGTCTTAAAACTCACATTAAtctccacactggagagaagcaaTACACATGCGGCCAATGTGGAAAGAGCTTCAGACAAAAAACTACTCTTAACAAACATACCAGGATCCACACTGAAGAGAAGCCTTACACATGTGaccagtgcgggaagagtttcagaCGAAAAGAAGACCGTGATATGCACTTAAAAacccacactggagagaaaccataCACATGCGATCAATGTGGGAAGAGCTTCACAAGAAAAGGAGCCCTTAACATACACATGTGCATCCACACCGGGGATAAGCCACACACATGTGATCAATGTGGGAAGAGCTTCAGACGAAAAGAAAACCGTGATGAACACTTAAAAaaccacactggagagaaaccataCACATGTGATCAGTGTGGGAAAAGTTTCACAAAAAAAGGAGCCCTTAACGTACACATGtggatccacactggagagaagccatACACATGCGGTCAGTGTTCGAAGAGCTTCAGACTGCAATCTAccctaaaaaaacacacaaggatccacactggagagaagccgtaCAAATGTGAACACTGTGAAAAGAGTTTCACACAAAAAGGAGCCCTTAACATACACGTGtggatccacactggagagaagccatACACATGCGATCAGTGTTGGAAAAGCTTCAGACTAAAATCTACCCTTAAAAAACACATAAGGATCCACACTTGAGAAGCTGTACACTGTGATCACCTTGGAATCAGAAAGACTAGAAAATCGTGACCAAAGCAGTAGAAAATCTTTTAGGGCAAATTTTCTGGAGGACCACCTGAAACTGTACATATGTTATTAATGTGGAAAGTGTTTTAGTCAGTTGGTTGTATTAAAGAGACACAGCGGCGTAAAGGATGCTTGAGTGTGGGTAGACATCAGATTTATCAGTATTCTTATTGATTGTGTCGGTTTTGGAGTTGCAAATTAAGTGATTTCCTTCAATGAAATCCTTCAAAGTTTTGTGACAGTGCCTTTCTAATAAACTTTGAGTAAACTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222573.1 False 3582 mRNA 0.40 3 5344237 5351569
XM_043222575.1 False 1728 mRNA 0.41 2 5336724 5341953
XM_043222576.1 True 4322 mRNA 0.42 4 5336724 5350466

Neighbor

gene id symbol gene type direction distance location
LOC122327497 LOC107659626 coding downstream 55801 5279478 ~ 5280923 (-)
LOC122327503 LOC107575528,LOC107709688,LOC107741386,LOC107568440 coding downstream 152438 5182941 ~ 5184286 (-)
LOC122327332 NA coding downstream 213473 5114167 ~ 5123251 (-)
LOC122327498 LOC107740712,LOC107755677 coding downstream 226063 5108760 ~ 5110661 (-)
LOC122328166 NA coding downstream 228173 5107353 ~ 5108551 (-)
LOC122327304 LOC107570597,LOC107658377,LOC107711545 coding upstream 3976 5355545 ~ 5373808 (-)
LOC122327375 LOC107570603,LOC107690762 coding upstream 21883 5373452 ~ 5378887 (-)
LOC122327381 NA coding upstream 79286 5430855 ~ 5434143 (-)
LOC122328170 NA coding upstream 120367 5471936 ~ 5480859 (-)
LOC122328171 NA coding upstream 130139 5481708 ~ 5490754 (-)
LOC122327610 NA non-coding downstream 26834 5308250 ~ 5309890 (-)
G150071 cacna2d2b,LOC107558272,LOC107653164,LOC107720977,LOC107655410 non-coding downstream 33486 5302860 ~ 5303238 (-)
G150060 NA non-coding downstream 59982 5273557 ~ 5276742 (-)
G150033 NA non-coding downstream 101264 5232171 ~ 5235460 (-)
G150025 LOC107683790,LOC107563976,LOC107744761 non-coding downstream 109850 5218835 ~ 5226874 (-)
G150086 LOC107586973,LOC107676140,LOC107698552,LOC107712186,LOC107658401,LOC107676139,LOC107681664 non-coding upstream 66887 5418456 ~ 5470508 (-)
G150093 NA non-coding upstream 99867 5451436 ~ 5454332 (-)
G150092 LOC107658400 non-coding upstream 146372 5497941 ~ 5506152 (-)
G150121 NA non-coding upstream 157001 5508570 ~ 5512967 (-)
G150161 tbc1d20,LOC107658381,LOC107586998,LOC107573569,LOC107653176,LOC107720987 non-coding upstream 193699 5545268 ~ 5545768 (-)
LOC122327354 NA other downstream 182868 5145926 ~ 5153856 (-)
LOC122327545 NA other downstream 599864 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 748302 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 849799 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 903224 4428805 ~ 4433500 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 175661 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 186987 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 286569 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 310172 5661741 ~ 5672809 (-)
LOC122327537 NA other upstream 406437 5758006 ~ 5763982 (-)

Expression


Co-expression Network