LOC122327319


Basic Information

Item Value
gene id LOC122327319
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5351215 ~ 5355113 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222593.1
CGGCTATAGTAATATCGTAAAGGCTGTCACGACTTTCCTGAAAGGAACTCATCTTGAACaggatttattgtttttttaatacacagtCCATCTGATATCCTAATGAATTCACACTTCGGTCCTGTGGATGGCGGTAATGCACTTCGTCTGCAAAACCACAGAAGAAGAAGTTGTTGTTGCAGAGCTTTGAGTGTACTGAGTTTATGACAGAAAGCTGAAAACATGACTGACCCAGAATCCTGCAGAATAAAACGAAAAGATACCGAACAACAAATAGATATGAGAAAAGAGAACAAGAAGATTGATGAACTGAGTGAAGAGGGGGAGAACCATCACGTCAACACTGAAGAAACATCTTGGAGATCCTCATTGacaagaagagaaaaaacaaggCCTGAGTGTGAAAAAAGTCTCTTGTTCAAGCAGAATCTTGACTTCCTGAAGGACCGCCTGAAAGTTCATACGAAGGACAAGCCATACATATGTTATTcatgtggaaagagttttagtCAGATGTGTGCATTAACAATACACCAAAAAAGACACAGTGGTGTGAAGGATCATGCTTGCACTGAGTGTGGAAAGACTTTTTTTACGCATGATGCTATGAAAGTGCACCAGACAGTTCACACTACAGAAACACCTTACAAGTGTTCAGACTGTGACAAGAGATTCAAACGACCAGAATATCTGAAAATACACAAGAagatccacactggagagaagccgcATATGTGtgatcagtgtgggaagagCTTTAGACTAAAACAAATGCTTAATCAACACATGGatatccacactggagagaagccacACATATGtgatcagtgtgggaagagttttaGACTAAAACAAATGCTTAATCAACACATGGAcctccacactggagagaattCGCACACGTGCGATCAGTGTGGGAAAAATTTCTCACAAAAATCTAACCTAAACAAACACATGAGGCTCCACGCTGGAGAGAAGCATACATGtgatcagtgtgggaagagtttcacacAAAAAGAGTACCTTAATGCGCACCTTAAAaaccacactggagagaaaccataCATGTGTGATCAGTGTGAGAAGAGTTTTGGAAAAAAGTCTGCTCTTAATTTacacatgaggatccacactggagagaagccatATGCGTGTTATCAATGTGGGAAGAGCTTCAGACTAAAACAAATGCTGAATCAACACATGGAtctccacactggagagaatcCGCACAAATGCGGACAGTGTGGGAAGAATTTCTCACAAAAATCAAACCTAAACAAACACATGAGACTCCACGCTGGAGAGAAGCATACATGtgatcagtgtgggaagagtttcacacAAAAAGAGTACCTTAATGCCCACCTAAAAacccacactggagagaaacctttcaCATGTGATCAATGTGAGAAGAGTTTCGGACAAAAATCGGCCCTTAATGTacacatgaggatccacactggagagaaaccctACACATGTGATCAGTGTGGAAAGTGTTTCAGGCTCAAGCAAACTCTTGACAAACACATGATGATCCACACTGGAGTGAAGCCATACACCTGCaatcagtgtggaaagagttttataaaatgtgatgtttttaaaaaacatctgcTTATTCATTCTAGAACGAGGCTAGAAAACTGTGACCAAAGCCCTAGAACATTTCTAAAGGACTGCCGGAAAGCTCAGACGAAGGAGAAGCCTTACATATGTAATTtatgtggaaagagttttagcCACATGGTTGCATTAAAGTTACACCAGAAAAGACACAGCGGTGTGAAGGATTATGCTTGCTCTATGTGCTGGAAGACCTTTTTTGCATATGGTGCACTGAAGGTGCACCAGACAGTTCACActacaaaaaaacctttcaagTGTTCACGCTGTGACAAGAGATTCAAACGATCTGATTATCTGAAAATACATGAGAggattcacactggagagaagccgtaTACATGTGATCAGTGTGGGAGGAGTTTCACACAAAGAGGAACCCTCACTGCACACAAGAAAACCCACAGTAGAGAGAAGCCATACTCCTGTGATCATTGTGAGAAAAGTTTCAAACGAAAAGAAAGCCTTCATGAtcacatgaggatccacaccggagagaaaccatACACATGTAATCAGTGTGGGAGGAGTTTCAGACTGAAAGAAATGCTTAATCGACACATGATTATCCACACCAGAGAGACGCCTTACACGTGTGATCAATGTGGGAGGAGTTTTCTAAGAAGACTAACCCTTTACAAACACAAGAAAACTCACAATTGTGTACTGAAACAGCACCAGACAGTTCACGCTACAGAAACGCCttacaagtgttcacactgtgacCAGAGATTCAAACAATCAACACATCTACAGATACATGAGAAGATCCACCCTGGAGAGAAGCTGCATCACTGCCATTcatgtgggaagagtttcactCAATTATCTTCTCTAATCTCTCATAAATTACACGTCTGCATGTCTAGAATTACAGTAAGTAGTTCAAGTTCTGATCCTGTTCTTCCAGGTGCGAGATAGGGCTGCATCAAGTAATTATTCTGATAATAGATTATTGAGAGATTATTGGACCAATTAATCAACTATTTGTTGATTATTTCATAGATTAATCAGTATCTTTATTGATTATTCAGCTTTTGGAGTTGAGTAAAATGTTGAGTTACACCCATTCTAACTAATAAACGAAACAAGGAAATGGC

Function

GO:

id name namespace
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport biological_process
GO:0048193 Golgi vesicle transport biological_process
GO:0004359 glutaminase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222593.1 True 2732 mRNA 0.41 3 5351215 5355113

Neighbor

gene id symbol gene type direction distance location
LOC122327315 NA coding downstream 9281 5327286 ~ 5341934 (-)
LOC122327497 LOC107659626 coding downstream 70292 5279478 ~ 5280923 (-)
LOC122327503 LOC107575528,LOC107709688,LOC107741386,LOC107568440 coding downstream 166929 5182941 ~ 5184286 (-)
LOC122327332 NA coding downstream 227964 5114167 ~ 5123251 (-)
LOC122327498 LOC107740712,LOC107755677 coding downstream 240554 5108760 ~ 5110661 (-)
LOC122327304 LOC107570597,LOC107658377,LOC107711545 coding upstream 432 5355545 ~ 5373808 (-)
LOC122327375 LOC107570603,LOC107690762 coding upstream 18339 5373452 ~ 5378887 (-)
LOC122327381 NA coding upstream 75742 5430855 ~ 5434143 (-)
LOC122328170 NA coding upstream 116823 5471936 ~ 5480859 (-)
LOC122328171 NA coding upstream 126595 5481708 ~ 5490754 (-)
LOC122327610 NA non-coding downstream 41325 5308250 ~ 5309890 (-)
G150071 cacna2d2b,LOC107558272,LOC107653164,LOC107720977,LOC107655410 non-coding downstream 47977 5302860 ~ 5303238 (-)
G150060 NA non-coding downstream 74473 5273557 ~ 5276742 (-)
G150033 NA non-coding downstream 115755 5232171 ~ 5235460 (-)
G150025 LOC107683790,LOC107563976,LOC107744761 non-coding downstream 124341 5218835 ~ 5226874 (-)
G150086 LOC107586973,LOC107676140,LOC107698552,LOC107712186,LOC107658401,LOC107676139,LOC107681664 non-coding upstream 63343 5418456 ~ 5470508 (-)
G150093 NA non-coding upstream 96323 5451436 ~ 5454332 (-)
G150092 LOC107658400 non-coding upstream 142828 5497941 ~ 5506152 (-)
G150121 NA non-coding upstream 153457 5508570 ~ 5512967 (-)
G150161 tbc1d20,LOC107658381,LOC107586998,LOC107573569,LOC107653176,LOC107720987 non-coding upstream 190155 5545268 ~ 5545768 (-)
LOC122327354 NA other downstream 197359 5145926 ~ 5153856 (-)
LOC122327545 NA other downstream 614355 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 762793 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 864290 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 917715 4428805 ~ 4433500 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 172117 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 183443 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 283025 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 306628 5661741 ~ 5672809 (-)
LOC122327537 NA other upstream 402893 5758006 ~ 5763982 (-)

Expression


Co-expression Network