LOC122327323


Basic Information

Item Value
gene id LOC122327323
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4738382 ~ 4745957 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222602.1
GATTATTACTTTCACTCAAAGCGAAAATAGAGGGACGGGGCGTCTTTTCTTCACCGAATCTGCATCAACCTttttacaattaacaaaaaaaaaaacctggaaaaATGAAGCATGTccttatttctctctttttgctgTGCGTCCGTGGACAtggtgTTGATACAGATACAATGCCAGTGTTagtgatggagggagattcGATCACTCTGTACACGGATATTGAAACAATTCAACAGGAAGAAATTATATGGTATTTTAATGACTGTTGCCTTGCTGACACCACTGGAGATCAGAACAGTACAGATGTTCAGTGTGTTAATGATACAGAGATATTCAGAAACAGACTTAAGGTGAATAATatgactggatctctgaccatcacagacaccagaaccacagactctggactttataAACTACAGATcggcaacagcagcagcagtcgTCTTCAGGTCTTCAGAGTTTATATCTATAATGCTCGTGAAGAAGATAAAATGAAGACAAAGTCAGTGAAGGAGGGACACTCGTTTATTTTATATCCTGGTGTAGTGAAAGCCACAAGTTATTTGGTGAAATGGATTTTTGATGGCATTCCTATTGCTGAAATCAGTGGAGATCTTAGTTTTAACTGTACAGATGTTCAGTGTAATAATGGCACTGAGAGATTCAGAAACAGGCTGAAACTCGATCAGACTctatctctgaccatcatgaacaccagaaccacagactctggagATTATAAACTACAGATCATCAGCAAAAGATTCAGCATCATGAAGAGCTTCATTGTTAATGTCACTGGTTATGCTGAAGCAGAGAGAGTGTCAGTcgtggagggagattcagtcactctatACTCTGATGTGGAAACAATCCAACAAGAAAAGcttaaatggtattttaatgagATTCAAATCACTGGAATCACTAGAGACTCCAATGAAACTTGTACAAGTGTTCAGTGTAAAGAGAGACTAAAAGTGAAtcatcagactggatctctgaccatcacaaaCATCAGCaccacagactctggactttataAACTACAGATCAGCAGTGACAGTCTTCAACTCTTCagtgtttctgtcttttATGCTCCTGAACAAGATAAACTGAAGACAAAGTCAGTGAAGGAGGGAGAATCTGTCATTTTAGATCCTGGTGTagtgaaaacaacaaattatttgatgaaatggatttttaatGACGTTCGCATCGCTGAAATCAATGGAGATCTTAGTTTCATTTGTACAGATGTTCAGTGTTTATATGCTGATGAGAGATTCAGAAACAGACTGAAGTTGAATCATaggactggatctctgaccatcttGAACGCCAGAAACACAGACTCTGGACTCTATTATCTACTCATAACCACCATCAGATACACCGTCTTAAAGAACTTTTGGGTTAATGTTACTGGTAATGTTGAAACAGAGAGCTTGTCAGTaatggagggagattcagtcactctacACACTGGTGTTGAAACAAACCAACAAGACGAGATTAGATGGTATTTTGATGACATCCGCGTCGCTCAGACCACTGGAGATCTCGGTTTTATGTGTACAGATGTTCAGTGTAAATATAGTGATGAGCGATttagagacagactgaagctggatcataagactggatctctgaccatcatgaacaccagaaccacagactctggactttatCATAATCAAGTCATCTACGGCAGCAGCATCAGTCACGAGATGTTCAGTGTTACTGTCTTTGGCGTTTCTGCTGCTGAACGAGATGAAATGAAGATAAAGTCAGTGAAGGAGGGAGAATCTGTCACTTTAGACACCCGCATGATACAAAACCCAAATGATTTATTGACATGGTATTTTAATGATACTCAAATCACTGGAGATCAGAGTCAGATCTGTACAGATGATGAGTGTaaagagagattcagagacagactggagctggatcatcagactggatctctgaccatcatgaacaccagaaccacagactctggactCTATAAATTACAGATCAGCAACAGCAGAACTAGCGTCATACAGAGCTTCAGTGTCACTGTATCTACTAAGGAACTGGCTGTTTCAAAATCGGTTCTGCCTCCAGCCGCTGTAGCAGGAATATGTGTTGCTGTAGCTGTTGTTCTGCTGCTCGTTGTTGCTGGGGTGATGTACTATCGCAAACATCAAGAGGGAGAAAGTGACATCATGCTGCACTTCACTAATCAGATGAACGGCACTGACAACCCTATTGATGATTGCGACCAATGAATCTTCTTTTTAATCCGACCGAAACTAAGGATGCTAACGACACATCACAGTAacgttattttttaaatatactttcatTGAAAGAAAATGTGAAGAAAAGGCACCAAAACCGGCACCAAAACCAGCGGGATTTCCAACAGTACCATTTTCGGCTAATTCGATTTAAACTCATTTGCTGATTAGGTAGCATAGCTTCAGAAAAGACAAACCATAAATGATCAACCAACTGAGTAAAAAGACAAAGCCTGACCAGAAATGTTCGAGTAAAAGCTAAACATCATGAGTTTTGAAGACCAGGCAGAATGAACTTCACGTCTGTTTCCCGAAAATCATTGCATGCCAACGACGGCAATGGTTTTTAAGAGAATATGCTGaattacacttttaaatataagtattgGGTTTAAGGTTACTCAATTATTGAATTgtacaaatgtgaaaaaaggtTAAATGTCATATCCTACTGAGATGCAATTTTGTAGATGGTTTATTCTTGTTATAATATACTTAAGTGGACCGagcagaacatcaaacaggccTGTGATCCCAGTTTAGTGTTTAATATCGCTTCAAACcccccaacaaaaaaaaaaaaaagtgcaaatggaatgaaatctgaaattaaTCTAAGGGTTTAAATAGTCTTGGCTCGTTTGAACATTCATGAGTCTAAGTctaagttttatattttaggaaTCATAAAGTGTTAAAAGATATATCACACAGGTCCGAAAGTTTAAAGGTAACCTAAAAATGTCAAGtttttaattactcaccctaatgTCGTTTATTGACTTATTGACTTATTGacttattattttagctttttttttatgcgcAAGAAGCATTGCCACAAGTATCGGTCCATAGAGTGTCTCCATTGTGTCCTGAATCTAAAATCTGAATCTCAGGAACTGAACCTGCTTGCTGGTATTGAGCATAGGAAGAGGTGTTTCAAGactatttaaaggaatagttctcatgccaaaaaaaatagacaaaaacgCGTTCATTCGATCAGCAATCCAAGACGTAGATGAGCTTGCTTCTTTATCTGAACGGATAGATACTCTGCAGGTAACTGAACTGCATGCAGCGGCCTGGACATGAGCAGGCAACAAATACAGGAGACTATTGTACAATATATAATCAAGATAAACTAAAAACGATCACAGACACTGCGCAGGAACACCAACGTCCGGCGACAGAACTGATTACATGATAAAGAAACAGGCTCATCTACATCTAGGATGGCTTGCGGGTGAATACGTTTTCAGCACGTtcgaatttttgggtgaactttttcTTTTAACGTGTTAAAGTAGcgatatgcatttattaatgtaatgtgaGTGCATGTATAATCTtgagatatattttattgtgtagcatttttgtaaatgttcttAGAAAAGTCATTACGCTGTCAGAGATGATGCGCTCTCATATACGCAGCAAAATCCCCGGTGTTAAATTAACGCTGTTGGGTGTCTATATGTGTTAAACGTGACACTAATGATACATCTCCATTGTTGAAGACGCTGGTGTTAACGAGCAGAATCACCAAAGAAGAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222602.1 True 3856 mRNA 0.39 10 4738382 4745957

Neighbor

gene id symbol gene type direction distance location
LOC122327429 NA coding downstream 32523 4701963 ~ 4705859 (-)
LOC122327345 NA coding downstream 41087 4691094 ~ 4697295 (-)
LOC122327393 NA coding downstream 59665 4649573 ~ 4678717 (-)
LOC122327436 NA coding downstream 103155 4628572 ~ 4635227 (-)
LOC122328157 LOC107582254 coding downstream 121605 4601851 ~ 4616777 (-)
LOC122327350 NA coding upstream 4284 4750241 ~ 4757432 (-)
LOC122328160 NA coding upstream 14073 4760030 ~ 4767528 (-)
LOC122327538 NA coding upstream 24621 4770578 ~ 4772743 (-)
gpd1b gpd1b,LOC107698578,LOC107721242,LOC107727040,LOC107694423,LOC107566434 coding upstream 27850 4773807 ~ 4777213 (-)
smarcd1 smarcd1,LOC107698569,LOC107694342 coding upstream 32026 4777983 ~ 4785215 (-)
G149594 NA non-coding downstream 57306 4679919 ~ 4681076 (-)
G149598 NA non-coding downstream 66612 4662075 ~ 4671770 (-)
G149592 LOC107729908,LOC107712186,LOC107702610,LOC107702613 non-coding downstream 112477 4625597 ~ 4625905 (-)
G149587 NA non-coding downstream 123497 4614307 ~ 4614885 (-)
G149586 NA non-coding downstream 127109 4610930 ~ 4611273 (-)
G149955 LOC107698556 non-coding upstream 186492 4932449 ~ 5041927 (-)
G149956 NA non-coding upstream 193478 4939435 ~ 4939839 (-)
LOC122327586 NA non-coding upstream 211444 4957401 ~ 4965773 (-)
G149962 NA non-coding upstream 245653 4991610 ~ 5003689 (-)
G149963 NA non-coding upstream 246004 4991961 ~ 4999176 (-)
LOC122327545 NA other downstream 1522 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 149960 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 251457 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 304882 4428805 ~ 4433500 (-)
LOC122327462 LOC107741386,LOC107698560 other downstream 456614 4272551 ~ 4281768 (-)
LOC122327354 NA other upstream 399969 5145926 ~ 5153856 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 781273 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 792599 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 892181 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 915784 5661741 ~ 5672809 (-)

Expression


Co-expression Network