LOC122327332


Basic Information

Item Value
gene id LOC122327332
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5114167 ~ 5123251 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222615.1
TCAAGCTCGCACCTTGGCGCTCGTGAGCACGTAATGCGGGTGTGTCTCACGACCCTTAAACTCCGGTGGACCGAGATTCACAGCcgcagcttttttttattgaactcCGCTGTCTCTCAGCGTCGTAGCGTAATGAAGCTCGCGTTATCGGTGATTTTATCCATATTCGTCTTCGACGGTGTGTTCGGTGTTGATCCAGATGAAGTGAAGACAGTGATAGAGGGAGATTCTGTCGCCCTACAGACTGATTTCACTGAAATGCAGAAAGACGGTATAACAGAGTGGACATTTAGTAACGCTAACATCGCATCAATCAATAAAGGAACTGGTAAAGTCGAATACAGCGATGATAAGTTGGTAGTGATCTTTAGCGGCAGACTTACTCTGGATCAAACCGGGTTTCTCACCATCTGGAATATCAGAATCAAACACTCTGGTGAATATAAAGTGGAGAGCATCAGCACTGCAGGCACTAAATCCAAGACGTTCAAAGTTATTGTAAAAGaaTCTCCACTCAAGTCTGTTGAAGATAAAGATGAAATAAAGGTGTTGTCAGCCACGAAGGGAAATTCTGAGACTCTACACACTGAAACCGAATTACAGGAACATGATCTAATACTCTGGAGATTCAGAGCTGAAGGGTATCTCATTGCTAAAGGAGATACAGAAGACAATCACACATCGTACTATAATAGTGCTGatgggagattcagagacagactgaagctggacagTAAGAcgggatctctgaccatcacagACCTCGATACTGAGCATACTGGAGAATTTAGACTGAAGATCATCAGCGACAGAAGGGTCATATTCAAAAGATTCACCGTTACTGTCTCTGTGCTAGGTCTGTCTCCGGGTGTTATAGCAGGGATATGTGTTGGTGTTCTGCTGTTGGTCGCTGCTGTAGCTGTAGTTGCTGTCGTTATGATTTATTGTCAACGTGGTCgctacaaattaaaatatctaatgTCGAAGGTCTCCAAACAACTGGAGCAGATGACGAAGATGACTGAAAAACTAGAGCGAATGACCAAGACCAACGAAAAAGACCTAGCGAAGATCTCTGAACAGCTAAATCAGATGGATGAAGCGAATGtgagagaaaatgtaaaaaACGAGCTCTAtggaaaactaaaacaaatgtCGGAGGGCTATGAAAAAGCATTACCCGAGATCTTTAAACAGCTAGAGCGACTGCGTGAACAGAGAATCCCAGAGCAACTGTTTGAGCTTTCTGAACAAGTAAACCAAATGAGTGGAACGGAGACGTCTCAACAGGAAACATGTGCTGATGTCCCACAAGAAGAGACACCGAGaccagaggtcagaggtgaaAGGGAACGGCGGATTTTTGTGGAAGAGACTCCTATAAGTAAAGCGCTTGGTGCTGGAAAGATACTGAGAGACAGTCAGGGCAGGAAGAGCATCGCCATCAGAgctgaagatgatgaagatcaTGCCCGTGgaGCAGATGGAGAATATCCTGGAAATGAACTGAAAGAGCTGAAAGAAGGTTTGACAGATGTAAAGATATCTGAACAAGAGTCATGTGCTGATGTCCCACAAGAAGAGACACCAAGATCAGAGACCGGAGAAGGTGAAAGGGAACGGATCATTTACGTTGAAGAGACTCCCATAAGTAAAGTGCTAGGTGCTGATAAGAGATTGAAAGACAGACAGGGCAAAAAGAGCATTGTTATTCGTAAAAACAATACTGAAGACCCTGCAGTTCAAACACACGAAGCAACAgaaaaagcagcaaatgaagaaaCACCTTTAATGAACCAAAAGGAGGAGGACGGACCAAAAGAGTAAAAAGTTGGGTTTAATGAGATAAGACACGCCCACCAGTGTCAATCACTGTGACATCATCAACATTACAGCTCTTGAATTCATCCGGTCAAAGTGAGAAATGAACCCCGTGTTTCTTGTGTTAAAAGGTTTCAGATGAAACGGTGTCATAAGTAACTGTATTAATGTTACACTACACTCCTGTTCTCCAAAGACGTGTTTTACCACAGAAGTATATCTCACAACCTTTGTTTTGAGAAAAACCTGCTGCACATGGTTAGGCACCGATATACTTCTGAAACGAACTGAAAATACGTAATTTCGAACAGAATCAGGCCAAAATAAGTTCGTAATGGCAGTTCGAATTGACACATGGTTCGATTCCCGTTCAGCAACATCTCGCCGCCTCCAGCAGCGCTCTGAAACAGTACACCGTTGCTCAGCCTTTTCGAACATCGTTTTGCCCTTGAacgaagaacagaaaaaaaaattagcttgAAGTATATCGGGCTTTAATGTTCTCATTCAGCTTGTCggtgatctacggctctgtgcATTAACTGCTCCATTTGAAAATAAGttgatggagatttaccgctaaacaaagaaccggctttactgacaaaatgcGCATGAATATATCGTGCAATATATTTTCCATCTCTATACAgtaatatactatttttttatgtattacataACAAAGCTTAAACATAGAAAGTCTATTTATCCATCCttaaatcaaattataaatgaatttagAGAGCATTACACCCAGAGACATTTGTTTCTCTCTATTCATCAGAAAGTAATGGCTGCCAGCTGACTCCAGTTATTGGTTGTCTTCTGTGATTGGAAGATTTTATGCCTCGGGTTTTTTCCTCAGTGTTATTGTGTTTACTTTAACAATCACAGTACATACTGTGTTTATGACAACTACTGCTTTTCTGGTTTACAAGCTACTATTTGTGTATTGTTCTTGATTTAGTCTAAATTGTTCATTCTTTGGGAATGAGTCAGGAGTTTGGGAATgtatttgtcttttcttttaataggttatatagtttttatgcaGGTTGTATGGTTTTTATACAGGTTTTATACAGGTTACATGGGTTATGTTTGTCATTTTGGCCTCTTAAAACCTCACACATgcataaattaaactttttttttatatata
>XM_043222616.1
TCAAGCTCGCACCTTGGCGCTCGTGAGCACGTAATGCGGGTGTGTCTCACGACCCTTAAACTCCGGTGGACCGAGATTCACAGCcgcagcttttttttattgaactcCGCTGTCTCTCAGCGTCGTAGCGTAATGAAGCTCGCGTTATCGGTGATTTTATCCATATTCGTCTTCGACGGTGTGTTCGGTGTTGATCCAGATGAAGTGAAGACAGTGATAGAGGGAGATTCTGTCGCCCTACAGACTGATTTCACTGAAATGCAGAAAGACGGTATAACAGAGTGGACATTTAGTAACGCTAACATCGCATCAATCAATAAAGGAACTGGTAAAGTCGAATACAGCGATGATAAGTTGGTAGTGATCTTTAGCGGCAGACTTACTCTGGATCAAACCGGGTTTCTCACCATCTGGAATATCAGAATCAAACACTCTGGTGAATATAAAGTGGAGAGCATCAGCACTGCAGGCACTAAATCCAAGACGTTCAAAGTTATTGTAAAAGaaTCTCCACTCAAGTCTGTTGAAGATAAAGATGAAATAAAGGTGTTGTCAGCCACGAAGGGAAATTCTGAGACTCTACACACTGAAACCGAATTACAGGAACATGATCTAATACTCTGGAGATTCAGAGCTGAAGGGTATCTCATTGCTAAAGGAGATACAGAAGACAATCACACATCGTACTATAATAGTGCTGatgggagattcagagacagactgaagctggacagTAAGAcgggatctctgaccatcacagACCTCGATACTGAGCATACTGGAGAATTTAGACTGAAGATCATCAGCGACAGAAGGGTCATATTCAAAAGATTCACCGTTACTGTCTCTGTGCTAGGTCTGTCTCCGGGTGTTATAGCAGGGATATGTGTTGGTGTTCTGCTGTTGGTCGCTGCTGTAGCTGTAGTTGCTGTCGTTATGATTTATTGTCAACGTGGTCgctacaaattaaaatatctaatgTCGAAGGTCTCCAAACAACTGGAGCAGATGACGAAGATGACTGAAAAACTAGAGCGAATGACCAAGACCAACGAAAAAGACCTAGCGAAGATCTCTGAACAGCTAAATCAGATGGATGAAGCGAATGtgagagaaaatgtaaaaaACGAGCTCTAtggaaaactaaaacaaatgtCGGAGGGCTATGAAAAAGCATTACCCGAGATCTTTAAACAGCTAGAGCGACTGCGTGAACAGAGAATCCCAGAGCAACTGTTTGAGCTTTCTGAACAAGTAAACCAAATGAGTGGAACGGAGACGTCTCAACAGGAAACATGTGCTGATGTCCCACAAGAAGAGACACCGAGaccagaggtcagaggtgaaAGGGAACGGCGGATTTTTGTGGAAGAGACTCCTATAAGTAAAGCGCTTGGTGCTGGAAAGATACTGAGAGACAGTCAGGGCAGGAAGAGCATCGCCATCAGAgctgaagatgatgaagatcaTGCCCGTGGTTTGACAGATGTAAAGATATCTGAACAAGAGTCATGTGCTGATGTCCCACAAGAAGAGACACCAAGATCAGAGACCGGAGAAGGTGAAAGGGAACGGATCATTTACGTTGAAGAGACTCCCATAAGTAAAGTGCTAGGTGCTGATAAGAGATTGAAAGACAGACAGGGCAAAAAGAGCATTGTTATTCGTAAAAACAATACTGAAGACCCTGCAGTTCAAACACACGAAGCAACAgaaaaagcagcaaatgaagaaaCACCTTTAATGAACCAAAAGGAGGAGGACGGACCAAAAGAGTAAAAAGTTGGGTTTAATGAGATAAGACACGCCCACCAGTGTCAATCACTGTGACATCATCAACATTACAGCTCTTGAATTCATCCGGTCAAAGTGAGAAATGAACCCCGTGTTTCTTGTGTTAAAAGGTTTCAGATGAAACGGTGTCATAAGTAACTGTATTAATGTTACACTACACTCCTGTTCTCCAAAGACGTGTTTTACCACAGAAGTATATCTCACAACCTTTGTTTTGAGAAAAACCTGCTGCACATGGTTAGGCACCGATATACTTCTGAAACGAACTGAAAATACGTAATTTCGAACAGAATCAGGCCAAAATAAGTTCGTAATGGCAGTTCGAATTGACACATGGTTCGATTCCCGTTCAGCAACATCTCGCCGCCTCCAGCAGCGCTCTGAAACAGTACACCGTTGCTCAGCCTTTTCGAACATCGTTTTGCCCTTGAacgaagaacagaaaaaaaaattagcttgAAGTATATCGGGCTTTAATGTTCTCATTCAGCTTGTCggtgatctacggctctgtgcATTAACTGCTCCATTTGAAAATAAGttgatggagatttaccgctaaacaaagaaccggctttactgacaaaatgcGCATGAATATATCGTGCAATATATTTTCCATCTCTATACAgtaatatactatttttttatgtattacataACAAAGCTTAAACATAGAAAGTCTATTTATCCATCCttaaatcaaattataaatgaatttagAGAGCATTACACCCAGAGACATTTGTTTCTCTCTATTCATCAGAAAGTAATGGCTGCCAGCTGACTCCAGTTATTGGTTGTCTTCTGTGATTGGAAGATTTTATGCCTCGGGTTTTTTCCTCAGTGTTATTGTGTTTACTTTAACAATCACAGTACATACTGTGTTTATGACAACTACTGCTTTTCTGGTTTACAAGCTACTATTTGTGTATTGTTCTTGATTTAGTCTAAATTGTTCATTCTTTGGGAATGAGTCAGGAGTTTGGGAATgtatttgtcttttcttttaataggttatatagtttttatgcaGGTTGTATGGTTTTTATACAGGTTTTATACAGGTTACATGGGTTATGTTTGTCATTTTGGCCTCTTAAAACCTCACACATgcataaattaaactttttttttatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222615.1 True 2986 mRNA 0.41 20 5114167 5123251
XM_043222616.1 False 2938 mRNA 0.41 19 5114167 5123251

Neighbor

gene id symbol gene type direction distance location
LOC122327498 LOC107740712,LOC107755677 coding downstream 3506 5108760 ~ 5110661 (-)
LOC122328166 NA coding downstream 5616 5107353 ~ 5108551 (-)
LOC122327526 NA coding downstream 27655 5084840 ~ 5086512 (-)
LOC122327494 NA coding downstream 43095 5060198 ~ 5071072 (-)
LOC122327307 NA coding downstream 92725 5016091 ~ 5021442 (-)
LOC122327503 LOC107575528,LOC107709688,LOC107741386,LOC107568440 coding upstream 59690 5182941 ~ 5184286 (-)
LOC122327497 LOC107659626 coding upstream 156227 5279478 ~ 5280923 (-)
LOC122327315 NA coding upstream 204035 5327286 ~ 5341934 (-)
LOC122327308 NA coding upstream 213473 5336724 ~ 5351569 (-)
LOC122327319 NA coding upstream 227964 5351215 ~ 5355113 (-)
G149955 LOC107698556 non-coding downstream 72240 4932449 ~ 5041927 (-)
G149962 NA non-coding downstream 110478 4991610 ~ 5003689 (-)
G149963 NA non-coding downstream 114991 4991961 ~ 4999176 (-)
LOC122327586 NA non-coding downstream 148394 4957401 ~ 4965773 (-)
G149956 NA non-coding downstream 174328 4939435 ~ 4939839 (-)
G150000 NA non-coding upstream 17996 5141247 ~ 5142179 (-)
LOC122327581 NA non-coding upstream 38121 5161372 ~ 5167342 (-)
G150008 NA non-coding upstream 54438 5177689 ~ 5181252 (-)
G150017 NA non-coding upstream 78071 5201322 ~ 5204007 (-)
G150025 LOC107683790,LOC107563976,LOC107744761 non-coding upstream 95584 5218835 ~ 5226874 (-)
LOC122327545 NA other downstream 377307 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 525745 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 627242 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 680667 4428805 ~ 4433500 (-)
LOC122327462 LOC107741386,LOC107698560 other downstream 832399 4272551 ~ 4281768 (-)
LOC122327354 NA other upstream 22675 5145926 ~ 5153856 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 403979 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 415305 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 514887 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 538490 5661741 ~ 5672809 (-)

Expression


Co-expression Network