LOC122327345


Basic Information

Item Value
gene id LOC122327345
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4691094 ~ 4697295 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222645.1
GTTTTTTACGCAGATGAAAGAACGTAACGTAGTGAAACGTCACAGCGTCCTGACGCTACAGCCCAGAAAGAACAGATGAAACGGAGATGACCAGGCAAAAATTAACTGAGTTTGTAGTCGTTACAGCAAATAATTGTGCAAAATGAAGCAAGTCTGGAATTTGCTCTTATTGCTCTTGTATTTCGTCGCGTGTGGGGATCCCACGAATGGAGGGACAGTGTCtgtgatggagggagattcagtcactttaaaatatctgatggaaaaaaaacaagaagaagatATCAGAtggtattttaataatagtccCATCGCTGAAATCACCGGTGATCACAGTAAGATCTGTACAGATGTTCAGTGTGATaatgagagattcagagacagactgaagctggattatcagactggatctctgaccatcacgaaAATCAGAACCTCAGACTCAGGAGAATATGATGTTCTGGTCTCAAGCAAAGTCCATGGAGGAGCAGGGTCCTACTCTGTTGTTGTTCATGGCTTGTCTGGTGTTGATGAAGATGAAATGCTACTAATCGAaggagattcagtcactctacACACTGGTGTTAAAACAAACCAGCAAGAAAAGattaaatggtattttaatgatATTCGAATAGCTCAAATCAGCGTAGATCAGAGTAAGACCTGCACAGATGTTCAGTGTAAAGATGGTGATGAGAGGTTTAGAGGCAGGTTAAAGCTGAACAAACAGACTGGATCcctgaccatcatgaacaccaGAACCTCAGATGCCGGACTTTATAAACTACAGATCATCAACAACAGAATCAGCATCATGAAGAGATTCAGTGTTACGGTCTCTAgTTCATCTGGTGTTGATACCGAGGTAATGGCAGCATCtgtgatggagggagattcagtcattttaaattcaaatgttaaaacaaaccaacaagAAAAGATTATATGGTTTTTTAATGGCATCCGCATCGCTCGAATCAGTGGAGATCTCAGTAATATATGTACAGATGTTCAGTGTAATAAAGGTACTGAGAGATTccgagacagactgaagctggatcgtcagactggatctctgaccatcatgaacaccacaaccacagactctggaGATTATCAACTACAGATCATAAGCAACAAGATCAGCATCGGGAAGCCCTTTAGGGTTTTTGTTCATAatgtttctgttgcaaaacaagaagaaatgaGAAGAAAGTCGGTGAAGGAGGGAGaatctgtcacttttgatcccGGTGAATCAAAAAACCCCAATGATTCCTTGACGTGgtattttaaagacattctCATTACTGAAATCACTGGAGATCAGTGTAAGATTTGTACAGATGTTCAGTGTGATGATAGATTCAGacacagactgaagctggatcgTCAAaatggatctctgaccatcatgaacatgAGGACCTCTGACTCTGGACTGTATAACCTAACGGTCACTAACATCAGATTCAACACCATAAAGAGCTTCAGAGTTGATGTCACTGCTGATGTAATAAGACTatatgctgctgctgctgctgtttttggTGTCGTTCTGCTGCTTGTTGCTTTAGCGGCTGCTGTGATTTACTATTACAAGCTCCGAAAAAGAAGTGCAGaaatCGCAATGCAGGCCAGTCATCAGGATAATGCAGAAGAAAGTCAACAGATGCTAAATGTGTCCTCTAATCAGCTGGGGACTCATTCACCCAGTGAATGACATGTAACAGTAAtgttggtatttatttatttttttcatataaagaGAAGATTCAGGGTAAAATGGTTTAATACTCAAAATAGAGGGGTAACAAGACATTTTACACAGAATAGCTGCTATTAGACCAGATAAACTGCTATTagattaaagttttatttttgtcagatTACAGCACTataagaaatacagaaatataatcATTGCGTTTTTGATCATCTGCAAAAGCTGTGCTTGAACATCACTGTGGAGAAAGTGCCAACAGAAAAGCAAATATGCCTAATGCCTTCTAACAAGTCTAACTTTTACCTCAATGGTTGCACAATTGTAGGTGGGGAGGAGTGAATAAGATCTGGTTCAAAGAGTGTTGTCCTATCTGCTATCTTCAGTCAGCTTTCTCTTTAAACTTCAAAGAAATTCCAGGTCATCTCCACAGGAGCCGTTAACCGTGGCCCAAACATACTAAAAAGCCACAATACACACAAGGAGATTGGCTCCATTAATCCACAAACTGTACGCGTTCCTGTGTTGTAGGCATGTTCGTAGTTTATCAAAGCTTAGTTATAATGCCGTAGCACTGTAGTGAAGGTCCAGCTCCTTGGAGACGTAGGAATGTAATCACTGCCTTAATGTTTTCCACACCCTGGCATGCTAGGTGATAAATGACTGTCTTCTGATTCCTGGATTGATGCTGTATACTATGTCACCCTAATTTGTGTCATGCTCTTTCTTATCATACTTTGacttaatattgaaaaaaaatcaccagaTCGCTGTAaaccaggggtgtcaaactcaattcctggagggccggagccctgcagagtttcaaccctgctaaaacacatatactatgcatgtctgaagtattcgattagctggatcaggtgtgtttaattagggttgcatctaaactctgcagggctccggccctccaggaactgagtttgacacccctgccaTGCAAATATACCATTGTGTGAGACAAAGGAACCTTGATTATTGTATGGCTTTAAATAGCCTTTTAGCCTTTTCACACTTGCATATAAATTTCAGACCTGGAACTCCAGGAACTGGACGCAACCGGACCAGGATGTCtgtattgcctaaaatatccaAGTCCATCCAAGTTTTCATAATTGCTGAAGGTTTTCGAAAAGTAGTTTTACCAATAACATGTAGCCACTGTATATGGAgcaaataaaatgtgtacaaaaata
>XM_043222646.1
AGTTTTTTACGCAGATGAAAGAACGTAACGTAGTGAAACGTCACAGCGTCCTGACGCTACAGCCCAGAAAGAACAGATGAAACGGAGATGACCAGGCAAAAATTAACTGAGTTTGTAGTCGTTACAGCAAATAATTGTGCAAAATGAAGCAAGTCTGGAATTTGCTCTTATTGCTCTTGTATTTCGTCGCGTGTGGGGATCCCACGAATGGAGGGACAGTGTCtgtgatggagggagattcagtcactttaaaatatctgatggaaaaaaaacaagaagaagatATCAGAtggtattttaataatagtccCATCGCTGAAATCACCGGTGATCACAGTAAGATCTGTACAGATGTTCAGTGTGATaatgagagattcagagacagactgaagctggattatcagactggatctctgaccatcacgaaAATCAGAACCTCAGACTCAGGAGAATATGATGTTCTGGTCTCAAGCAAAGTCCATGGAGGAGCAGGGTCCTACTCTGTTGTTGTTCATGGCTTGTCTGGTGTTGATGAAGATGAAATGCTACTAATCGAaggagattcagtcactctacACACTGGTGTTAAAACAAACCAGCAAGAAAAGattaaatggtattttaatgatATTCGAATAGCTCAAATCAGCGTAGATCAGAGTAAGACCTGCACAGATGTTCAGTGTAAAGATGGTGATGAGAGGTTTAGAGGCAGGTTAAAGCTGAACAAACAGACTGGATCcctgaccatcatgaacaccaGAACCTCAGATGCCGGACTTTATAAACTACAGATCATCAACAACAGAATCAGCATCATGAAGAGATTCAGTGTTACGGTCTCTAgTTCATCTGGTGTTGATACCGAGGTAATGGCAGCATCtgtgatggagggagattcagtcattttaaattcaaatgttaaaacaaaccaacaagAAAAGATTATATGGTTTTTTAATGGCATCCGCATCGCTCGAATCAGTGGAGATCTCAGTAATATATGTACAGATGTTCAGTGTAATAAAGGTACTGAGAGATTccgagacagactgaagctggatcgtcagactggatctctgaccatcatgaacaccacaaccacagactctggaGATTATCAACTACAGATCATAAGCAACAAGATCAGCATCGGGAAGCCCTTTAGGGTTTTTGTTCATAatgtttctgttgcaaaacaagaagaaatgaGAAGAAAGTCGGTGAAGGAGGGAGaatctgtcacttttgatcccGGTGAATCAAAAAACCCCAATGATTCCTTGACGTGgtattttaaagacattctCATTACTGAAATCACTGGAGATCAGTGTAAGATTTGTACAGATGTTCAGTGTGATGATAGATTCAGacacagactgaagctggatcgTCAAaatggatctctgaccatcatgaacatgAGGACCTCTGACTCTGGACTGTATAACCTAACGGTCACTAACATCAGATTCAACACCATAAAGAGCTTCAGAGTTGATGTCACTGaaatCGCAATGCAGGCCAGTCATCAGGATAATGCAGAAGAAAGTCAACAGATGCTAAATGTGTCCTCTAATCAGCTGGGGACTCATTCACCCAGTGAATGACATGTAACAGTAAtgttggtatttatttatttttttcatataaagaGAAGATTCAGGGTAAAATGGTTTAATACTCAAAATAGAGGGGTAACAAGACATTTTACACAGAATAGCTGCTATTAGACCAGATAAACTGCTATTagattaaagttttatttttgtcagatTACAGCACTataagaaatacagaaatataatcATTGCGTTTTTGATCATCTGCAAAAGCTGTGCTTGAACATCACTGTGGAGAAAGTGCCAACAGAAAAGCAAATATGCCTAATGCCTTCTAACAAGTCTAACTTTTACCTCAATGGTTGCACAATTGTAGGTGGGGAGGAGTGAATAAGATCTGGTTCAAAGAGTGTTGTCCTATCTGCTATCTTCAGTCAGCTTTCTCTTTAAACTTCAAAGAAATTCCAGGTCATCTCCACAGGAGCCGTTAACCGTGGCCCAAACATACTAAAAAGCCACAATACACACAAGGAGATTGGCTCCATTAATCCACAAACTGTACGCGTTCCTGTGTTGTAGGCATGTTCGTAGTTTATCAAAGCTTAGTTATAATGCCGTAGCACTGTAGTGAAGGTCCAGCTCCTTGGAGACGTAGGAATGTAATCACTGCCTTAATGTTTTCCACACCCTGGCATGCTAGGTGATAAATGACTGTCTTCTGATTCCTGGATTGATGCTGTATACTATGTCACCCTAATTTGTGTCATGCTCTTTCTTATCATACTTTGacttaatattgaaaaaaaatcaccagaTCGCTGTAaaccaggggtgtcaaactcaattcctggagggccggagccctgcagagtttcaaccctgctaaaacacatatactatgcatgtctgaagtattcgattagctggatcaggtgtgtttaattagggttgcatctaaactctgcagggctccggccctccaggaactgagtttgacacccctgccaTGCAAATATACCATTGTGTGAGACAAAGGAACCTTGATTATTGTATGGCTTTAAATAGCCTTTTAGCCTTTTCACACTTGCATATAAATTTCAGACCTGGAACTCCAGGAACTGGACGCAACCGGACCAGGATGTCtgtattgcctaaaatatccaAGTCCATCCAAGTTTTCATAATTGCTGAAGGTTTTCGAAAAGTAGTTTTACCAATAACATGTAGCCACTGTATATGGAgcaaataaaatgtgtacaaaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222645.1 True 2943 mRNA 0.40 8 4691094 4697294
XM_043222646.1 False 2830 mRNA 0.40 7 4691094 4697295

Neighbor

gene id symbol gene type direction distance location
LOC122327393 NA coding downstream 12377 4649573 ~ 4678717 (-)
LOC122327436 NA coding downstream 55867 4628572 ~ 4635227 (-)
LOC122328157 LOC107582254 coding downstream 74317 4601851 ~ 4616777 (-)
LOC122328155 NA coding downstream 107028 4581101 ~ 4584066 (-)
LOC122328153 NA coding downstream 142246 4547909 ~ 4548848 (-)
LOC122327429 NA coding upstream 4668 4701963 ~ 4705859 (-)
LOC122327323 NA coding upstream 41087 4738382 ~ 4745957 (-)
LOC122327350 NA coding upstream 52946 4750241 ~ 4757432 (-)
LOC122328160 NA coding upstream 62735 4760030 ~ 4767528 (-)
LOC122327538 NA coding upstream 73283 4770578 ~ 4772743 (-)
G149594 NA non-coding downstream 10018 4679919 ~ 4681076 (-)
G149598 NA non-coding downstream 19324 4662075 ~ 4671770 (-)
G149592 LOC107729908,LOC107712186,LOC107702610,LOC107702613 non-coding downstream 65189 4625597 ~ 4625905 (-)
G149587 NA non-coding downstream 76209 4614307 ~ 4614885 (-)
G149586 NA non-coding downstream 79821 4610930 ~ 4611273 (-)
G149955 LOC107698556 non-coding upstream 235154 4932449 ~ 5041927 (-)
G149956 NA non-coding upstream 242140 4939435 ~ 4939839 (-)
LOC122327586 NA non-coding upstream 260106 4957401 ~ 4965773 (-)
G149962 NA non-coding upstream 294315 4991610 ~ 5003689 (-)
G149963 NA non-coding upstream 294666 4991961 ~ 4999176 (-)
LOC122328156 NA other downstream 102672 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 204169 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 257594 4428805 ~ 4433500 (-)
LOC122327462 LOC107741386,LOC107698560 other downstream 409326 4272551 ~ 4281768 (-)
G149491 NA other downstream 532113 4156492 ~ 4158981 (-)
LOC122327545 NA other upstream 10579 4707874 ~ 4736860 (-)
LOC122327354 NA other upstream 448631 5145926 ~ 5153856 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 829935 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 841261 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 940843 5638138 ~ 5652159 (-)

Expression


Co-expression Network