LOC122327346


Basic Information

Item Value
gene id LOC122327346
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2963231 ~ 2972360 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222647.1
tcagTTGTGTACGTCCACGTTTTTTGGGATTTTCCGTTATTTGTCCACGTGTTACTGTAATATTCATAGGTGGAATCTGAGGAAAGCGCGGGAAAATAAACAACTTCTGCTGGTCGGGTGTGTGAGTGGTTTTCCCTTCAAATAAGATAAGCTCCATTAATAGTAGATGCACGTACGCAATGCGAGTTGAAGTGACCACAGATGTCAAGATGTGAGGATAAATTCTCTATGAGGTTTATTATCTTGTTATAGTTGCATCATATGACCGGGTTAAGCAATATCACACGAGTAAACGTGCTCTTTTCCACGATTGCAAATGTGATATTGCTTATATGCGACAGTTCAACAAACAAGACGGTAATGCCGAGTCACATATTAGACATTATATTGTTTGGTTTTGCTATCCATTGCTTAACAATGAACGTAATATAAATCCGAAGAAGAACACAAGGTGGTGTTTTGTTGCTGAACGAATCagcatttttgaacaaatcgtgCGAGTCAGTGATTCAAAGACTCGTTGATAAACACACTCATTTGTTTCGTTTCTGAATCAGTCAGCCGGTTGAATgaacgattcagtgactcactcattGAGACAATGGCTTTCCTggatgttttagttttatatttaatgtttccaatcttttattagttttcacaCAAGGCCAAAATTCATTTGAAAACGTAAAATCAGCAAAAGCTTGTCGATTTTTGTGATAATAAAGGAGCCGGACGTGTGAGCGGAAACTGGCTAGGGTGGAGGGGAAGACACAGCAGATAAATATCACACTTCAGTCCTGAGTGCTTTTAGACATCACTGTTGTGGGTTTTCTCCGTGAATGTTTTCTATTACCGAACCAGTTTTGACGAGTTTGTCTTTTCGTGAGATCCGTGGACTGAAACCGGTGAAGATGTTTTGGGTCGTTTCATTGTGTTTGCGTTTGTGGCATCTGGTCGGTGCGTTTGGTGGTAAAGTGGAGTCGGTGTCAGAGGTGGTTGGAAACTCAGTCACTCTCAACTCTGATCTTACTGAATTGATGGACGGTGATGAGATTCAGTGGAGGTTTGGGAATCAAAACACTTTAATCGCTGAAATCAACAAACAGACCGACAGCACGACTGTatatgatgatgttcttgacgggagattcagagacagactgaagctggacaatcaaactggatctctgaccatcatgaacatcaCAACTCAACACGCTGGGCGTTATAAAATACagaccaacaaaataaataagagtTTCAAAATCACAGTAATTGGCGTAGAGGAGTCGCTGTCAGTGAAGaagggagattcagtcactctcaGCTCCGGTCGTACCGAATTAACGGACGATGATGTGATTCAGTGGAAGTTTTTAACCGAAAATTCTTTAATCGCTGAAATCAACAAACAGACCGGCATCACGACTGTGtatgatgatgttcttgacgggagattcagagacagactgaagctggacgaTCAAaccggatctctgaccatcacagACATGAGAATCACAGACTTCGGAGGTTATCGGCTATATTCCAATATTATGGAGATTACGTTCTTCCTCGGTGTCCATAGTGAAATATCAGCGATGGAGGGAGAGTCAGTCACTCTCAACAATGATCTTACTGAAGTACGGAGCGGTGGTGTTATTCTGTGGCggtttaaaagtgaaaatgcttTATTAGCTAAAATCAGCAATCCGAATGCCATCTTGGCTGTATGTAATGATGATGTTTTTGacgagagattcagagacagactgaagccggacaatcaaactggatctctgaccatcatgaacatcaCAATGAATCACGCTGGAGATTATGAACAATGGGCTAACGAACTGAATGCGATTTTCAGTCTCACTGTCTTTACTCGTCTGCCTGTTCCCGTCATCAGCAGTAACTCCTCAAACTGTTCTTCATCTTTTTCGTCATCATCTTGTTCGTTGTTGTGTTGGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacatctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgAACATCAGCAGACTCTGTCACACGTGTTCAGGCTCTGAACACTGCTGTGGTTTTACTGAAGCTGTGATCCGATTGGTCCTCTCCGCTCTGGTGGGCGTGGCTACGGTCACTATTCTTGTTTATGACATCAGATCCAGAAGAAATCAACGAGATCAAATACACGTTCACACAGCAGATACGACGTGTGTGCAACAGAGCCTTTCTGAGAGGAGACCAGCGTCTGGTTCTTTTGAAGCTGACTGCTTGTAGAACCAAAAGTGATCTGGATGAAGACACAATCATCACAGGGAGGAACCTTTTATCAAATATtgcatgatttattaatattagatcTGATGATTCTACGTTGTGCCGACCACAGCACTCGGGACTTTGTTCCTCCTTTCCTTTGCCTTTTCAAAGCATTTGCTCATTTTCGTTTTTTCGCTCCACAGTgaaatttcttcttttaatgCTGCAGCAGATGCACTGTGCTTTTACTGTCTCTATCTCTGAGATTATTGCACTATACTGAGACTAAAACAAGTCTAATAGTGCTGTTAGTAATCCTA
>XM_043222648.1
tcagTTGTGTACGTCCACGTTTTTTGGGATTTTCCGTTATTTGTCCACGTGTTACTGTAATATTCATAGGTGGAATCTGAGGAAAGCGCGGGAAAATAAACAACTTCTGCTGGTCGGGTGTGTGAGTGGTTTTCCCTTCAAATAAGATAAGCTCCATTAATAGTAGATGCACGTACGCAATGCGAGTTGAAGTGACCACAGATGTCAAGATGTGAGGATAAATTCTCTATGAGGTTTATTATCTTGTTATAGTTGCATCATATGACCGGGTTAAGCAATATCACACGAGTAAACGTGCTCTTTTCCACGATTGCAAATGTGATATTGCTTATATGCGACAGTTCAACAAACAAGACGGTAATGCCGAGTCACATATTAGACATTATATTGTTTGGTTTTGCTATCCATTGCTTAACAATGAACGTAATATAAATCCGAAGAAGAACACAAGGTGGTGTTTTGTTGCTGAACGAATCagcatttttgaacaaatcgtgCGAGTCAGTGATTCAAAGACTCGTTGATAAACACACTCATTTGTTTCGTTTCTGAATCAGTCAGCCGGTTGAATgaacgattcagtgactcactcattGAGACAATGGCTTTCCTggatgttttagttttatatttaatgtttccaatcttttattagttttcacaCAAGGCCAAAATTCATTTGAAAACGTAAAATCAGCAAAAGCTTGTCGATTTTTGTGATAATAAAGGAGCCGGACGTGTGAGCGGAAACTGGCTAGGGTGGAGGGGAAGACACAGCAGATAAATATCACACTTCAGTCCTGAGTGCTTTTAGACATCACTGTTGTGGGTTTTCTCCGTGAATGTTTTCTATTACCGAACCAGTTTTGACGAGTTTGTCTTTTCGTGAGATCCGTGGACTGAAACCGGTGAAGATGTTTTGGGTCGTTTCATTGTGTTTGCGTTTGTGGCATCTGGTCGGTGCGTTTGGTGGTAAAGTGGAGTCGGTGTCAGAGGTGGTTGGAAACTCAGTCACTCTCAACTCTGATCTTACTGAATTGATGGACGGTGATGAGATTCAGTGGAGGTTTGGGAATCAAAACACTTTAATCGCTGAAATCAACAAACAGACCGACAGCACGACTGTatatgatgatgttcttgacgggagattcagagacagactgaagctggacaatcaaactggatctctgaccatcatgaacatcaCAACTCAACACGCTGGGCGTTATAAAATACagaccaacaaaataaataagagtTTCAAAATCACAGTAATTGGCGAGGAGTCGCTGTCAGTGAAGaagggagattcagtcactctcaGCTCCGGTCGTACCGAATTAACGGACGATGATGTGATTCAGTGGAAGTTTTTAACCGAAAATTCTTTAATCGCTGAAATCAACAAACAGACCGGCATCACGACTGTGtatgatgatgttcttgacgggagattcagagacagactgaagctggacgaTCAAaccggatctctgaccatcacagACATGAGAATCACAGACTTCGGAGGTTATCGGCTATATTCCAATATTATGGAGATTACGTTCTTCCTCGGTGTCCATAGTGAAATATCAGCGATGGAGGGAGAGTCAGTCACTCTCAACAATGATCTTACTGAAGTACGGAGCGGTGGTGTTATTCTGTGGCggtttaaaagtgaaaatgcttTATTAGCTAAAATCAGCAATCCGAATGCCATCTTGGCTGTATGTAATGATGATGTTTTTGacgagagattcagagacagactgaagccggacaatcaaactggatctctgaccatcatgaacatcaCAATGAATCACGCTGGAGATTATGAACAATGGGCTAACGAACTGAATGCGATTTTCAGTCTCACTGTCTTTACTCGTCTGCCTGTTCCCGTCATCAGCAGTAACTCCTCAAACTGTTCTTCATCTTTTTCGTCATCATCTTGTTCGTTGTTGTGTTGGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacatctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgAACATCAGCAGACTCTGTCACACGTGTTCAGGCTCTGAACACTGCTGTGGTTTTACTGAAGCTGTGATCCGATTGGTCCTCTCCGCTCTGGTGGGCGTGGCTACGGTCACTATTCTTGTTTATGACATCAGATCCAGAAGAAATCAACGAGATCAAATACACGTTCACACAGCAGATACGACGTGTGTGCAACAGAGCCTTTCTGAGAGGAGACCAGCGTCTGGTTCTTTTGAAGCTGACTGCTTGTAGAACCAAAAGTGATCTGGATGAAGACACAATCATCACAGGGAGGAACCTTTTATCAAATATtgcatgatttattaatattagatcTGATGATTCTACGTTGTGCCGACCACAGCACTCGGGACTTTGTTCCTCCTTTCCTTTGCCTTTTCAAAGCATTTGCTCATTTTCGTTTTTTCGCTCCACAGTgaaatttcttcttttaatgCTGCAGCAGATGCACTGTGCTTTTACTGTCTCTATCTCTGAGATTATTGCACTATACTGAGACTAAAACAAGTCTAATAGTGCTGTTAGTAATCCTA
>XM_043222649.1
GCCCagaattcatttgaaaatgcataatCAGCAAAAGCTTGTTGATTTTGACGATGACGAAGGAGATGAACACGCAGATTTTTGGCATCACTATCATGGGTTTGTGGCGTCTGGAGTCCGGTGCGTTTGGTGGTAAAGTGGAGTCGGTGTCAGAGGTGGTTGGAAACTCAGTCACTCTCAACTCTGATCTTACTGAATTGATGGACGGTGATGAGATTCAGTGGAGGTTTGGGAATCAAAACACTTTAATCGCTGAAATCAACAAACAGACCGACAGCACGACTGTatatgatgatgttcttgacgggagattcagagacagactgaagctggacaatcaaactggatctctgaccatcatgaacatcaCAACTCAACACGCTGGGCGTTATAAAATACagaccaacaaaataaataagagtTTCAAAATCACAGTAATTGGCGTAGAGGAGTCGCTGTCAGTGAAGaagggagattcagtcactctcaGCTCCGGTCGTACCGAATTAACGGACGATGATGTGATTCAGTGGAAGTTTTTAACCGAAAATTCTTTAATCGCTGAAATCAACAAACAGACCGGCATCACGACTGTGtatgatgatgttcttgacgggagattcagagacagactgaagctggacgaTCAAaccggatctctgaccatcacagACATGAGAATCACAGACTTCGGAGGTTATCGGCTATATTCCAATATTATGGAGATTACGTTCTTCCTCGGTGTCCATAGTGAAATATCAGCGATGGAGGGAGAGTCAGTCACTCTCAACAATGATCTTACTGAAGTACGGAGCGGTGGTGTTATTCTGTGGCggtttaaaagtgaaaatgcttTATTAGCTAAAATCAGCAATCCGAATGCCATCTTGGCTGTATGTAATGATGATGTTTTTGacgagagattcagagacagactgaagccggacaatcaaactggatctctgaccatcatgaacatcaCAATGAATCACGCTGGAGATTATGAACAATGGGCTAACGAACTGAATGCGATTTTCAGTCTCACTGTCTTTACTCGTCTGCCTGTTCCCGTCATCAGCAGTAACTCCTCAAACTGTTCTTCATCTTTTTCGTCATCATCTTGTTCGTTGTTGTGTTGGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacatctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgAACATCAGCAGACTCTGTCACACGTGTTCAGGCTCTGAACACTGCTGTGGTTTTACTGAAGCTGTGATCCGATTGGTCCTCTCCGCTCTGGTGGGCGTGGCTACGGTCACTATTCTTGTTTATGACATCAGATCCAGAAGAAATCAACGAGATCAAATACACGTTCACACAGCAGATACGACGTGTGTGCAACAGAGCCTTTCTGAGAGGAGACCAGCGTCTGGTTCTTTTGAAGCTGACTGCTTGTAGAACCAAAAGTGATCTGGATGAAGACACAATCATCACAGGGAGGAACCTTTTATCAAATATtgcatgatttattaatattagatcTGATGATTCTACGTTGTGCCGACCACAGCACTCGGGACTTTGTTCCTCCTTTCCTTTGCCTTTTCAAAGCATTTGCTCATTTTCGTTTTTTCGCTCCACAGTgaaatttcttcttttaatgCTGCAGCAGATGCACTGTGCTTTTACTGTCTCTATCTCTGAGATTATTGCACTATACTGAGACTAAAACAAGTCTAATAGTGCTGTTAGTAATCCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222647.1 True 2707 mRNA 0.42 7 2963231 2968043
XM_043222648.1 False 2704 mRNA 0.42 7 2963231 2968043
XM_043222649.1 False 1867 mRNA 0.43 7 2963231 2972360

Neighbor

gene id symbol gene type direction distance location
LOC122327343 NA coding downstream 9434 2951134 ~ 2953797 (-)
LOC122328125 LOC107570673,LOC107575767 coding downstream 13534 2941004 ~ 2949697 (-)
calr3a calr3a,LOC107702625,LOC107717161,LOC107561598,LOC107549384,LOC107704500,LOC107742789 coding downstream 71465 2888182 ~ 2891766 (-)
rad23ab rad23ab,LOC107717165,LOC107704496,LOC108271249,LOC107702626 coding downstream 75737 2880554 ~ 2887494 (-)
trnad-guc_19 NA coding downstream 82826 2880334 ~ 2880405 (-)
LOC122327311 cherp,LOC107742793,LOC107753747 coding upstream 5291 2977651 ~ 2988298 (-)
LOC122327522 NA coding upstream 17910 2990270 ~ 2993545 (-)
rx1 rx1,LOC107704501,LOC107566365,LOC107742795,LOC107753738,LOC107549385 coding upstream 26744 2999104 ~ 3002795 (-)
matk matk,LOC107702632,LOC107704492,LOC107566337 coding upstream 37727 3010087 ~ 3017408 (-)
zfr2 zfr2,LOC107742797,LOC107727559,LOC107698606,LOC107566358 coding upstream 45110 3017470 ~ 3034197 (-)
LOC122327605 NA non-coding downstream 64581 2895960 ~ 2898650 (-)
G148860 NA non-coding downstream 203544 2698113 ~ 2759687 (-)
G148749 NA non-coding downstream 370502 2591572 ~ 2592729 (-)
LOC122327855 NA non-coding downstream 400008 2527094 ~ 2563223 (-)
LOC122328197 NA non-coding downstream 438929 2518437 ~ 2524302 (-)
G148906 NA non-coding upstream 69092 3041452 ~ 3045417 (-)
G148927 NA non-coding upstream 130219 3102579 ~ 3102897 (-)
G149071 NA non-coding upstream 220928 3193288 ~ 3194804 (-)
G149074 NA non-coding upstream 261312 3233672 ~ 3235759 (-)
G149076 NA non-coding upstream 270061 3242421 ~ 3242805 (-)
gpr35.2 NA other downstream 712670 2244631 ~ 2250561 (-)
LOC122328032 NA other downstream 847048 2114320 ~ 2116183 (-)
G148613 NA other downstream 1298604 1661185 ~ 1664627 (-)
G148574 NA other downstream 1308891 1643710 ~ 1654340 (-)
LOC122327997 NA other downstream 1348693 1583015 ~ 1614538 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other upstream 79040 3051400 ~ 3065177 (-)
dnase1l4.1 zgc:101000,LOC107566350,LOC107712182,LOC107702655 other upstream 251788 3224148 ~ 3232213 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other upstream 283036 3255396 ~ 3273051 (-)
si:rp71-36a1.1 NA other upstream 353215 3325575 ~ 3366122 (-)
LOC122327341 NA other upstream 405672 3378032 ~ 3451429 (-)

Expression


Co-expression Network