LOC122327350



Basic Information


Item Value
gene id LOC122327350
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4750241 ~ 4757432 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043222653.1
CTCACGTGACCACGCTTCACTACATCAGTCTCCCGGTTTACTTTCACTTACTGCGTTACAGCAACAGACCTTTACTTCACAGAACGAGCATCGCCTGAAAATGAAGCGCGTTTTTATTCTTCTCCTTTCGCTTTTGCGTGTCTGTGGCCTGGATATAGCACTAGTGTCAGTcatggagggagattcagtcactctatACACTGATGTGGAAACCATCCAACAAGAAGAGATTAGATGGTATTTTAATGCTATTCCAGTTGCTGACATCGCTGGAGATCAGAGTAAGAACTGTACAGATGTTCAGTGTAGTGCAGAGACATCCAACAGAATGAAGATAAAtcatcagactggatctctgaccatcacaaaCATCAGAACCTCAGACTCTGGACTCTACAAACTACAGATCAGCAGTGACAGTCTTCAACTCTTCAGTGTTTCTGTCAATTATGCTCCTGAACAAGATAAACTGAAGACAAAGTCAGTGAAGGCGGGAGAATCTGTCATTTTAGATTCTGGTGTAGTGAAAACAACCAATTATCTGatgaaatggatttttaatGACGTTCGCATCGCTGAAATGAATGGAGATCTTAGTTTCATTTGTACAGATGTTCAGTGTTTATATGCTGATGAGAGATTCAGAAACAGACTGAAGTTGAATCATaggactggatctctgaccatcttGAACACCAGAAACACAGACTCTGGACTCTATTATCTACTCATAACCACCATCAGATACACCGTCTTAAAGAGCTTTTGGGTTAATGTTACTGGTAATGTTGAGAGCATTGCAGAGAGCTTGTCAGTaatggagggagattcagtcactctacACACTGGTGTTGAAACAAACCAACAAGACGAGATTAGATGGTATTTTGATGACATTCGCATCGCACAAACCACTGGAGATCTCGGTTTTATGTGTACAGATGTTCAGTGTAAATATAGTGATGAGCGATttagagacagactgaagctggatcatAAGACTGGATCTCTGATCATCATGAACACCagaaccacagactctggactttatCATAATCAAGTCATCTACGGCAGCAGCATCAGTCACGAGATGTTCAGTGTTACTGTCTTTGGCGTTTCTGCTGCTGAACGAGATGAAATGAAGATAAAGTCAGTGAAGGAGGGAGAATCTGTCACTTTAGACACCGGAATGATACAAAACCCAAATGATTTATTGACATGGTATTTTAATGATACTCAAATCACTGGAGATCAGAGTCAGATCTGTACAGATGATGAGTGTaaagagagattcagagacagactggagctggatcatcagactggatctctgaccatcatgaacatcaAGACTACAGACTCTGGATTCTATAAACTACAGATCAGCAACAGCAGAACTAGCATCAAAAAGATCTTCACCATCACTGTCCCAATGGTTTCAGGTTCTGGTCTGTCTTCCGCCGCTGTAGCAGGAATAATATGTTTAGTTGTCGTTCTGCTGCTCGTTGTTGCTGGAGTGATGTACTATCGCAAGCGTCAAGCGGGACGAAATGATTACGTTACGGACATGGTGATACAGTTCGGTAGACAGATGGATAAAGACAACGTCTGTGACTACTGCCAATGAATCCAACTGAAACCGAGGCTGCGGACGAGACGTCACAGTAACTTCGTGTTTTATGGTGATTCTTTCATTGAAAGGGAACATAAAGAAAATCTGGGAAATTAAAAGTGTCAAGATACCAAGATTTCAGTATTTGGTACTAGTAAAACTTAGTCCCAATTTcaactaatttaaattaaaaattaaataaaataaaatttgaacaTAAGAACttaagtcatttaaataataaagagttcagaatcaaacatttttctttaaaatgagcatttctttctttctggcTACTTAGGTTTCTATGTAAGTGATGTTTCTTCTCAGTGGCTTGAGGCTGGCGTTTAGCGCATTTGAAGTTCTCGATaaacatatactgtgtgtgGAGTCTCGTTTTTGACCAAAATggcttttagaggcttttgcatctgaactcttcaaatacaattatttattaaattttttttttaagtcatgtAGCTTAGCTTCAGATGAGACAAACAGTAAACTGGCAGCTACTGTAAATGAGTTTGACAAAGCGTGACCAGAAagattagtagtagtagttttaAGAAGAgttagaatgtttttaaaatgctttcttgagccaacaaaataaagtaaaaaacagaaaaaaaaaacatatccaaTAGAACAAAAAGAGCTTGAGGTTTTTAAAGATGCTAATGTTTACagtaatttacagtttttttgtattaggAGCTTTACAGAGTGTACAGGTGTTTTAAACGGGAATCGAGTTaggttttacaatttttttatggtGTTGTAAATTTGCCGTTAAAGCTTCAAATCCAGCAAATGTTGACTCATGAAAAATCAACATTCAGAATCAGAGATTCAGATTAACCTCTGAATCTCAGGAACCTGTAATAACTGCACTGAAAGACACTGTGAAGAGAAGCAGCAACACAattctgaatgtgttttatatgtattttatatgttacTGAATGCTGTTTACTGGATGCTTTCCATACTGTTATTAAGCAGGCGGGTGTTTAAATGAAACacgtttaaatgaataattcacatGAAAATGGGAAACAAAATGTTATGACTCTGAGATTGTTTCTTGGTCAGAACAAATGATCCCCGAtgaattgaaacaaaaaaactgcatgcGGCAGCCATAGAAAGACATGACAATAAACTCAGGAAAGCTTTGTACACAATGCACAATGGACTAGCGGTGATTCTGGGGAAATCACTGAGATAGCTTCGAGCCAAACTCCATATTCCATAATAACGCATAATAACCTCCAGTGTAATGTGATCTGACGAAGAAGCAATCTCATCTAGATCTAGCATTTTcagcaaacttttatttttgggtgaacctttccttttacatgtttaatggtgaaacaacaaatgcaatgagtttgctTCCATCTTTGAAAAGGTCAGTAATGTCAGAAAGGCGATTGAGAAACGATCTAGTGCAGAATTCACACAGAATCGACTGAAATCTCTGTTTAGAAGCAGATCTCCTGGAAGTGGTGAACGCctcacttctttctgggacttttccaaactTCCTGAAAACTACAGTTGTCTTGATAACACCACAATGAGCAACTATAGACCAATATCAAATCCTTTCTTTCATAGGTAAGCTCGTTGGAAAGATAGTTTAAAATCAGttgaatatagatttttatttaattgtattctttttgtttcttgtttgtgATGATTGTTTTGTTAAGCTCTTTGAATTACCAGTGGATATGAAATGTACCATAAGTAAACTTGCATGAAAAGACCACCCttgtttaaaagcttttattaagaatgcattttattcattaaagaatttaaagaaaaatca

Function


GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation
ko05152 Tuberculosis
ko05310 Asthma
ko05321 Inflammatory bowel disease
ko05332 Graft-versus-host disease

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043222653.1 True 3473 mRNA 0.37 8 4750241 4757432

Neighbor


gene id symbol gene type direction distance location
LOC122327323 NA coding downstream 4284 4738382 ~ 4745957 (-)
LOC122327429 NA coding downstream 44382 4701963 ~ 4705859 (-)
LOC122327345 NA coding downstream 52946 4691094 ~ 4697295 (-)
LOC122327393 NA coding downstream 71524 4649573 ~ 4678717 (-)
LOC122327436 NA coding downstream 115014 4628572 ~ 4635227 (-)
LOC122328160 NA coding upstream 2598 4760030 ~ 4767528 (-)
LOC122327538 NA coding upstream 13146 4770578 ~ 4772743 (-)
gpd1b gpd1b,LOC107698578,LOC107721242,LOC107727040,LOC107694423,LOC107566434 coding upstream 16375 4773807 ~ 4777213 (-)
smarcd1 smarcd1,LOC107698569,LOC107694342 coding upstream 20551 4777983 ~ 4785215 (-)
asic1b asic1b,asic1,LOC107569540,LOC107727129 coding upstream 33115 4790547 ~ 4830499 (-)
G149594 NA non-coding downstream 69165 4679919 ~ 4681076 (-)
G149598 NA non-coding downstream 78471 4662075 ~ 4671770 (-)
G149592 LOC107729908,LOC107712186,LOC107702610,LOC107702613 non-coding downstream 124336 4625597 ~ 4625905 (-)
G149587 NA non-coding downstream 135356 4614307 ~ 4614885 (-)
G149586 NA non-coding downstream 138968 4610930 ~ 4611273 (-)
G149955 LOC107698556 non-coding upstream 175017 4932449 ~ 5041927 (-)
G149956 NA non-coding upstream 182003 4939435 ~ 4939839 (-)
LOC122327586 NA non-coding upstream 199969 4957401 ~ 4965773 (-)
G149962 NA non-coding upstream 234178 4991610 ~ 5003689 (-)
G149963 NA non-coding upstream 234529 4991961 ~ 4999176 (-)
LOC122327545 NA other downstream 13381 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 161819 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 263316 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 316741 4428805 ~ 4433500 (-)
LOC122327462 LOC107741386,LOC107698560 other downstream 468473 4272551 ~ 4281768 (-)
LOC122327354 NA other upstream 388494 5145926 ~ 5153856 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 769798 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 781124 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 880706 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 904309 5661741 ~ 5672809 (-)

Expression



Co-expression Network