LOC122327363


Basic Information

Item Value
gene id LOC122327363
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3156434 ~ 3161742 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222674.1
TCGAACTCTGACCTGCTAGCAGCGCTTGTGTTTCCTCTCAGGAGCCCATTCACTTCGTACAGTCATAGGCGTGGACTGTACTTCACGGTCAGGTGTGAGACTTCTCCGGCGCTGGAATTATTTAAAACGTTCGCTCGTTTTGACCGGACTCTTAAAGCTTTTAAAGCTTTCACTCGTATCGTTCTTTTCATCTAAGATCGGTTGAACATGATAGACGTCACATGTAAAAGTGACACTGCTTTAACAGCCGTCGCTTTCACTATCACGTGGTTAAGGACCGTTCTGAGCGAACGGACTGATTGAACGCTTTGAGGCTCAACGAACAGTTCACTGATAACTCCTGTGGAATAGGGAgatgtttgctttgtttttcgtTCAGTTAGTCGCGAACGGTGTGTTTGGTCACACGGATGAAATGAGTTCAGTGGcagtgatggagggagattctGTCACTTTATGTACTGATCTTACTGAAATACCGAAAGCTGATCTGATCCTGTGGACGTTCGGATCTGGAAGCACTCGAATAGCGCAGATCAACAGAATGGCCAATAAGATGTCGTTATATGGCGACGTTCTTGACGAGAGATTCAGAGAACGACTGAAGCTGGACAATCAGACTGGGTCTCTGACCATCACAGACACCACAACTGAACACACTGGACTTTACAGATTTTTACAGATCATTGACGGAAACGAGTTCCTGCCCAAGAAATTCAGTGTTGTTGTTTATGCTCTTCTGCCTGTTCCTGTCATCAGCAGAAACTCTTCACAATCATCATCTTGTTCATTGTTGTGTTCGGCGGTGAACGTGGGTCATGTtactctctcctggtacaaaggaaactCTTTATtgtccaacatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacttacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgGACATCAGCAGACTCTGTCACACGGGTGCAGCACCAGGTTTATCCACAGGTCAAATAGCGctggtttgtgtttgtgctctGGCTGTGGCTGCAGTTTTGTGCggcatttattattacttccAGCGCAAGATGCATAAACGAGCAGATAAGGGTGatgGACCTGACGAAGAGGAACTCGAGAGCCTACAAAgtgTAGTTCCTGGACACAATGGATATGTTCTTCAGCCAAACTGCGGAGATGGGGAAACTTGCAATGTTCCTTCTAATGAGAACCAACATTCAGAAAACGGTGCAGTTCCTTTGTTAGCCGCGGCGGCAGACGGTAACACATCATGtgGTGGGAATTCGTCTGTTCAGGAGGGAGATTTAGAAAATAGTGTGCTTGTTAAGGAAGATATAATCACATCGGTGCCGGTGATCGAGGGACAATGCGTCACGCTGCACACCGATCTTAAGGAAATACGGGAAATTGAGATGATATGGTGGAAGTTTGCAGATTCCAAAAAACACAACTGTGCTAAATTTGTTCTATTAGCTACGCTGAACAAAACGAACAATGAGGTTTACACATATAATGAAACAATTCCACGGTTCAAAGAGAGTTTAAAACTGAGCCAGGACACCGGATCTCTCACCATCAAAAGCGTTAAACCCGGACATTACGGATATTATAAACAACACATCGCCAGCAAAGAGGAGATGGTCGTTCATACCTTCAGTGTCGTTGCTAAAAACGTAATAAAAGAGCAGACCCAGAACCTTCTCCAGAGAAGTCACACCTGCCCATGATCACAACAGATGACCTTACAGCTTTGAAGACTGGAATATTATCCATATTTCAATTCCACTGACGAAAACAAGAAACGTTTCAACTTTTCTCAACAATCTAACgaccaaaaaaaatctgtttat
>XM_043222675.1
TCGAACTCTGACCTGCTAGCAGCGCTTGTGTTTCCTCTCAGGAGCCCATTCACTTCGTACAGTCATAGGCGTGGACTGTACTTCACGGTCAGGTGTGAGACTTCTCCGGCGCTGGAATTATTTAAAACGTTCGCTCGTTTTGACCGGACTCTTAAAGCTTTTAAAGCTTTCACTCGTATCGTTCTTTTCATCTAAGATCGGTTGAACATGATAGACGTCACATGTAAAAGTGACACTGCTTTAACAGCCGTCGCTTTCACTATCACGTGGTTAAGGACCGTTCTGAGCGAACGGACTGATTGAACGCTTTGAGGCTCAACGAACAGTTCACTGATAACTCCTGTGGAATAGGGAgatgtttgctttgtttttcgtTCAGTTAGTCGCGAACGGTGTGTTTGGTCACACGGATGAAATGAGTTCAGTGGcagtgatggagggagattctGTCACTTTATGTACTGATCTTACTGAAATACCGAAAGCTGATCTGATCCTGTGGACGTTCGGATCTGGAAGCACTCGAATAGCGCAGATCAACAGAATGGCCAATAAGATGTCGTTATATGGCGACGTTCTTGACGAGAGATTCAGAGAACGACTGAAGCTGGACAATCAGACTGGGTCTCTGACCATCACAGACACCACAACTGAACACACTGGACTTTACAGATTTTTACAGATCATTGACGGAAACGAGTTCCTGCCCAAGAAATTCAGTGTTGTTGTTTATGCTCTTCTGCCTGTTCCTGTCATCAGCAGAAACTCTTCACAATCATCATCTTGTTCATTGTTGTGTTCGGCGGTGAACGTGGGTCATGTtactctctcctggtacaaaggaaactCTTTATtgtccaacatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacttacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgGACATCAGCAGACTCTGTCACACGGGTGCAGCACCAGGTTTATCCACAGGTCAAATAGCGctggtttgtgtttgtgctctGGCTGTGGCTGCAGTTTTGTGCggcatttattattacttccAGCGCAAGATGCATAAACGAGCAGATAAGGGTGatgGACCTGACGAAGAGGAACTCGAGAGCCTACAAAgtgTAGTTCCTGGACACAATGGATATGTTCTTCAGCCAAACTGCGGAGATGGGGAAACTTGCAATGTTCCTTCTAATGAGAACCAACATTCAGAAAACGGTGCAGTTCCTTTGTTAGCCGCGGCGGCAGACGGTGGGAATTCGTCTGTTCAGGAGGGAGATTTAGAAAATAGTGTGCTTGTTAAGGAAGATATAATCACATCGGTGCCGGTGATCGAGGGACAATGCGTCACGCTGCACACCGATCTTAAGGAAATACGGGAAATTGAGATGATATGGTGGAAGTTTGCAGATTCCAAAAAACACAACTGTGCTAAATTTGTTCTATTAGCTACGCTGAACAAAACGAACAATGAGGTTTACACATATAATGAAACAATTCCACGGTTCAAAGAGAGTTTAAAACTGAGCCAGGACACCGGATCTCTCACCATCAAAAGCGTTAAACCCGGACATTACGGATATTATAAACAACACATCGCCAGCAAAGAGGAGATGGTCGTTCATACCTTCAGTGTCGTTGCTAAAAACGTAATAAAAGAGCAGACCCAGAACCTTCTCCAGAGAAGTCACACCTGCCCATGATCACAACAGATGACCTTACAGCTTTGAAGACTGGAATATTATCCATATTTCAATTCCACTGACGAAAACAAGAAACGTTTCAACTTTTCTCAACAATCTAACgaccaaaaaaaatctgtttat
>XM_043222676.1
TCGAACTCTGACCTGCTAGCAGCGCTTGTGTTTCCTCTCAGGAGCCCATTCACTTCGTACAGTCATAGGCGTGGACTGTACTTCACGGTCAGGTGTGAGACTTCTCCGGCGCTGGAATTATTTAAAACGTTCGCTCGTTTTGACCGGACTCTTAAAGCTTTTAAAGCTTTCACTCGTATCGTTCTTTTCATCTAAGATCGGTTGAACATGATAGACGTCACATGTAAAAGTGACACTGCTTTAACAGCCGTCGCTTTCACTATCACGTGGTTAAGGACCGTTCTGAGCGAACGGACTGATTGAACGCTTTGAGGCTCAACGAACAGTTCACTGATAACTCCTGTGGAATAGGGAgatgtttgctttgtttttcgtTCAGTTAGTCGCGAACGGTGTGTTTGGTCACACGGATGAAATGAGTTCAGTGGcagtgatggagggagattctGTCACTTTATGTACTGATCTTACTGAAATACCGAAAGCTGATCTGATCCTGTGGACGTTCGGATCTGGAAGCACTCGAATAGCGCAGATCAACAGAATGGCCAATAAGATGTCGTTATATGGCGACGTTCTTGACGAGAGATTCAGAGAACGACTGAAGCTGGACAATCAGACTGGGTCTCTGACCATCACAGACACCACAACTGAACACACTGGACTTTACAGATTTTTACAGATCATTGACGGAAACGAGTTCCTGCCCAAGAAATTCAGTGTTGTTGTTTATGCTCTTCTGCCTGTTCCTGTCATCAGCAGAAACTCTTCACAATCATCATCTTGTTCATTGTTGTGTTCGGCGGTGAACGTGGGTCATGTtactctctcctggtacaaaggaaactCTTTATtgtccaacatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacttacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgGACATCAGCAGACTCTGTCACACGGGTGCAGCACCAGGTTTATCCACAGGTCAAATAGCGctggtttgtgtttgtgctctGGCTGTGGCTGCAGTTTTGTGCggcatttattattacttccAGCGCAAGATGCATAAACGAGCAGATAAGGGTGatgGACCTGACGAAGAGGAACTCGAGAGCCTACAAAgtgTAGTTCCTGGACACAATGGATATGTTCTTCAGCCAAACTGCGGAGATGGGGAAACTTGCAATGTTCCTTCTAATGAGAACCAACATTCAGAAAACGGTGGGAATTCGTCTGTTCAGGAGGGAGATTTAGAAAATAGTGTGCTTGTTAAGGAAGATATAATCACATCGGTGCCGGTGATCGAGGGACAATGCGTCACGCTGCACACCGATCTTAAGGAAATACGGGAAATTGAGATGATATGGTGGAAGTTTGCAGATTCCAAAAAACACAACTGTGCTAAATTTGTTCTATTAGCTACGCTGAACAAAACGAACAATGAGGTTTACACATATAATGAAACAATTCCACGGTTCAAAGAGAGTTTAAAACTGAGCCAGGACACCGGATCTCTCACCATCAAAAGCGTTAAACCCGGACATTACGGATATTATAAACAACACATCGCCAGCAAAGAGGAGATGGTCGTTCATACCTTCAGTGTCGTTGCTAAAAACGTAATAAAAGAGCAGACCCAGAACCTTCTCCAGAGAAGTCACACCTGCCCATGATCACAACAGATGACCTTACAGCTTTGAAGACTGGAATATTATCCATATTTCAATTCCACTGACGAAAACAAGAAACGTTTCAACTTTTCTCAACAATCTAACgaccaaaaaaaatctgtttat

Function

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process
GO:0010941 regulation of cell death biological_process
GO:0010942 positive regulation of cell death biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0043067 regulation of programmed cell death biological_process
GO:0043068 positive regulation of programmed cell death biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222674.1 True 1891 mRNA 0.44 11 3156434 3161742
XM_043222675.1 False 1876 mRNA 0.44 11 3156434 3161742
XM_043222676.1 False 1843 mRNA 0.44 10 3156434 3161742

Neighbor

gene id symbol gene type direction distance location
zgc:194627 NA coding downstream 1073 3153725 ~ 3155361 (-)
s1pr4 s1pr4,LOC107566363,LOC107727551,LOC107702636,LOC107718481,LOC107698562 coding downstream 44223 3108933 ~ 3112211 (-)
ncln ncln,ncl1,LOC107566356,LOC107727558,LOC107549377,LOC107718474 coding downstream 66978 3079929 ~ 3089456 (-)
zfr2 zfr2,LOC107742797,LOC107727559,LOC107698606,LOC107566358 coding downstream 122237 3017470 ~ 3034197 (-)
matk matk,LOC107702632,LOC107704492,LOC107566337 coding downstream 139026 3010087 ~ 3017408 (-)
LOC122327516 NA coding upstream 5231 3166973 ~ 3169896 (-)
LOC122327365 LOC107586973 coding upstream 8593 3170335 ~ 3177580 (-)
LOC122327372 NA coding upstream 19372 3181114 ~ 3185473 (-)
LOC122328126 LOC107702631,LOC107566362,LOC107698575,LOC107549383,LOC107712181 coding upstream 26292 3188034 ~ 3189883 (-)
podxl2 LOC107702650,LOC107566349,LOC107712169,LOC107698566,LOC107718457,LOC107549351 coding upstream 34680 3196422 ~ 3212991 (-)
G148927 NA non-coding downstream 53537 3102579 ~ 3102897 (-)
G148906 NA non-coding downstream 111017 3041452 ~ 3045417 (-)
G148889 NA non-coding downstream 172497 2874411 ~ 2983937 (-)
LOC122327605 NA non-coding downstream 257784 2895960 ~ 2898650 (-)
G148860 NA non-coding downstream 396747 2698113 ~ 2759687 (-)
G149071 NA non-coding upstream 31546 3193288 ~ 3194804 (-)
G149074 NA non-coding upstream 71930 3233672 ~ 3235759 (-)
G149076 NA non-coding upstream 80679 3242421 ~ 3242805 (-)
G149081 NA non-coding upstream 89507 3251249 ~ 3251471 (-)
G149111 NA non-coding upstream 188351 3350093 ~ 3353485 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other downstream 91257 3051400 ~ 3065177 (-)
gpr35.2 NA other downstream 905873 2244631 ~ 2250561 (-)
LOC122328032 NA other downstream 1040251 2114320 ~ 2116183 (-)
G148613 NA other downstream 1491807 1661185 ~ 1664627 (-)
G148574 NA other downstream 1502094 1643710 ~ 1654340 (-)
dnase1l4.1 zgc:101000,LOC107566350,LOC107712182,LOC107702655 other upstream 62406 3224148 ~ 3232213 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other upstream 93654 3255396 ~ 3273051 (-)
si:rp71-36a1.1 NA other upstream 163833 3325575 ~ 3366122 (-)
LOC122327341 NA other upstream 216290 3378032 ~ 3451429 (-)
G149102 NA other upstream 226518 3388260 ~ 3414711 (-)

Expression


Co-expression Network