LOC122327410 (LOC107712173)


Basic Information

Item Value
gene id LOC122327410
gene name LOC107712173
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3309263 ~ 3315077 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222759.1
TCCTCCATGCCGTACGTGGAGCCCTGGACGTGTTGGCTAGTTTCTATTTGGAATATCTCTCTTATAACGGAATGCCCTCCGAAGTGAAGTCCACCTCCAAGAACACTAACTGTCGACGGAACGCACGGAAGTAACCGCCATTTAAGTCGTTCGCGCTGCTATTGCAGATTTTGGAAACGTCAAACTTAAACGAAGCTCTCATAAATCGTcgtgttaatttatttagtcGTTTCAGCGATTCAGATTTCTCTGTTGTTATTGTGAGCATTGCGTTAGCTGTCTGTCGGGAGGGTGTGGTTCACCGACGAGTATTAATAATATCCATGGAAATCTGATTTGGTTGAAATCGTCAACAATATGACTTTCAAGATATTTCTGTCTTTGTTATTAATGCGCGGGGTGTTTGGTTCTGGAGATGATGAAGTTTTATCAGCGATGGAGGAGATTCGGTCACTCTAAACATGAATCTTACCCAAGTACAGGGATTTAATCTGATACAGTGGAGGTTTGGAGGTGAAGGATCCAGCATTGCTAGAACCGATGGAGATGATTTCTCATATACTAATGACGAGATATTCAGAGACAGACTACAGCTGaatcagactggatctctgaccatcaagAACATGAGAACCAAACACTCTGGACTTTATAAACTACAGATCGACCACAGCAGTGGGACATCAAATGCTAAATTttttgttgctgtctatgAGTCTCCATCCGTTATTGATGTTGGTGAAGCTCAAACAAAGAGCGTGTCTGTGAAAGAGGGAGATTCTGTTACTCTTCAGACTGATGTTAATGAACTACATGGAGATGAGCTGATAGTGTGGAGGTTTGGAGGAGAAGGAAAACTCATAGCTAAGAGTGATATAGAGACCAATGGCTTATCTTTAAACACTgatgagagattcagagacagactgcaGCTGAATgatcagactggatctctgaccatcgaGAATATCAAAAACACAGACTCCGGACTTTATACAGTGAAGATCAGCAGCAGCGAACAGATGAGAAACAGGAGATTCATTGTTAATGTCGGTGGTTCAGGTGTGTCTTCCGGTGCTGTAGCAGGGATATCTGTTGCTTTCCTGCTGGCGATTTTAATTGTTGCTATTTACTATCGCTGCAAGATctctaaactaaaaataagacAATTTATACATAGAAAGAAGGATATGATAGTAAAGGAGGGAGAAGACGTCACACTTCACACTGACGCTAATATAGAGGCAGAAGATCGGATCCTGTGGACGTTTGAAGCTCTAGGTGCTCGTATCGCTGAAATCAGAGAAGGTACCAGAGAGACATTTGATGGTGGTGATGGGAGATTCACAGACAGACTGATGCTGGATGAGACTGGATCCCTGACCATCAGAAACATCGAGATTAAACACAGTGGAGTCTATATACTACAGATCAAGAAATGTCACATGATGAGTTGGCTCTCATACAAAAGATTCACAGTTTCAGTCAATGGGAGGACTATATCGGTGATGGAGGAGATGATCTCACTCTAAATTCTGATTTCGATTTAAACAAAGATAAGCAGATAAAGTGGTTGTTTGGAGATCAGTGCATGAGAGCTCCCATAGCTGAGATCAATGTAGAGACCGGTGAGATCTTTCCGTTCGAGGGTAAAGCTGACGGGAGATTCAGaaacagactgaagctggatcatCTGAcgggatctctgaccatcaagAACACCGGACCTGAGCACTCTGGATACTATGAAATCCAGATCGAACACGACAGAGGGACCACATTCAGGATGTTGATGGTTTCTGTCAGTGAGAGGACGATATCGGCGGAGGAGGGAACAAATGTGACTCTAGAGATCGAAACACAGAAGGATGATCAGATTCTGTGGATGTTCGAGCTGAAGAGACTCTCGTGGCTCAAATCAAAGGAGAGACCAGAGAGACACGTGATGTTCCTGATGAGAGATTCACaaacagactgaagctggaagagtctggatctctgaccatcagaaaCATCACAGCTGAACACACCGGAGCCTATAAAGCCCAGATCGTCAGCCGCGGAAGTGTCTCATACAAGAAATTCAAGGTTGTTATGCTTGCGGAGTATGTGCCAGTGAAGAAGGGAGATGCTGTTACGCTACACACTGACTCCAAAACACAGAGAAACGATCAGATacgctggatgtttggagagAAAACTCTCCTCGCTGAAATCAAAGAAGGGAGCGGAGAGATCTCTACATATGATGATGTTCTTAacgggagattcagagacagactgaagctggacgaGCGGACCGGATCACTGACCATCACTAACTTCACGACACAACACACTGGACTCTACACGGTGAAGATCAACAGAAGCGCAGAAACCTACAGAAACAagagttttgatgtttttgccaGAGTTTCAGTGATTTCAGAGGAAAAGGAGGTAAATGAAAATGAAGTGAAGTCTGATGGAAATCATCTGAATGTATGAAGACTGAAATCATCAACacagaaatgaagaaatgagCCGTGTACTCACAAATATCATATAGCTTTTAGAAAATATAGTTTATCACAGCATTTCTCTAACCACTGTATGTGCTgctttatgtaataaataacactaaaataga
>XM_043222760.1
TCCTCCATGCCGTACGTGGAGCCCTGGACGTGTTGGCTAGTTTCTATTTGGAATATCTCTCTTATAACGGAATGCCCTCCGAAGTGAAGTCCACCTCCAAGAACACTAACTGTCGACGGAACGCACGGAAGTAACCGCCATTTAAGTCGTTCGCGCTGCTATTGCAGATTTTGGAAACGTCAAACTTAAACGAAGCTCTCATAAATCGTcgtgttaatttatttagtcGTTTCAGCGATTCAGATTTCTCTGTTGTTATTGTGAGCATTGCGTTAGCTGTCTGTCGGGAGGGTGTGGTTCACCGACGAGTATTAATAATATCCATGGAAATCTGATTTGGTTGAAATCGTCAACAATATGACTTTCAAGATATTTCTGTCTTTGTTATTAATGCGCGGGGTGTTTGGTTCTGGAGATGATGAAGTTTTATCAGCGATGGAGGAGATTCGGTCACTCTAAACATGAATCTTACCCAAGTACAGGGATTTAATCTGATACAGTGGAGGTTTGGAGGTGAAGGATCCAGCATTGCTAGAACCGATGGAGATGATTTCTCATATACTAATGACGAGATATTCAGAGACAGACTACAGCTGaatcagactggatctctgaccatcaagAACATGAGAACCAAACACTCTGGACTTTATAAACTACAGATCGACCACAGCAGTGGGACATCAAATGCTAAATTttttgttgctgtctatgAGTCTCCATCCGTTATTGATGTTGGTGAAGCTCAAACAAAGAGCGTGTCTGTGAAAGAGGGAGATTCTGTTACTCTTCAGACTGATGTTAATGAACTACATGGAGATGAGCTGATAGTGTGGAGGTTTGGAGGAGAAGGAAAACTCATAGCTAAGAGTGATATAGAGACCAATGGCTTATCTTTAAACACTgatgagagattcagagacagactgcaGCTGAATgatcagactggatctctgaccatcgaGAATATCAAAAACACAGACTCCGGACTTTATACAGTGAAGATCAGCAGCAGCGAACAGATGAGAAACAGGAGATTCATTGTTAATGTCGGTGGTTCAGGTGTGTCTTCCGGTGCTGTAGCAGGGATATCTGTTGCTTTCCTGCTGGCGATTTTAATTGTTGCTATTTACTATCGCTGCAAGATctctaaactaaaaataagacAATTTATACATAGAAAGAAGGATATGATAGTAAAGGAGGGAGAAGACGTCACACTTCACACTGACGCTAATATAGAGGCAGAAGATCGGATCCTGTGGACGTTTGAAGCTCTAGGTGCTCGTATCGCTGAAATCAGAGAAGGTACCAGAGAGACATTTGATGGTGGTGATGGGAGATTCACAGACAGACTGATGCTGGATGAGACTGGATCCCTGACCATCAGAAACATCGAGATTAAACACAGTGGAGTCTATATACTACAGATCAAGAAATGTCACATGATGAGTTGGCTCTCATACAAAAGATTCACAGTTTCAGTCAATGGGAGGACTATATCGGTGATGGAGGAGATGATCTCACTCTAAATTCTGATTTCGATTTAAACAAAGATAAGCAGATAAAGTGGTTGTTTGGAGATCAGTGCATGAGAGCTCCCATAGCTGAGATCAATGTAGAGACCGGTGAGATCTTTCCGTTCGAGGGTAAAGCTGACGGGAGATTCAGaaacagactgaagctggatcatCTGAcgggatctctgaccatcaagAACACCGGACCTGAGCACTCTGGATACTATGAAATCCAGATCGAACACGACAGAGGGACCACATTCAGGATGTTGATGGTTTCTGTCAGTGAGAGGACGATATCGGCGGAGGAGGGAACAAATGTGACTCTAGAGATCGAAACACAGAAGGATGATCAGATTCTGTGGATGTTCGAGCTGAAGAGACTCTCGTGGCTCAAATCAAAGGAGAGACCAGAGAGACACGTGATGTTCCTGATGAGAGATTCACaaacagactgaagctggaagagtctggatctctgaccatcagaaaCATCACAGCTGAACACACCGGAGCCTATAAAGCCCAGATCGTCAGCCGCGGAAGTGTCTCATACAAGAAATTCAAGGTTGTTATGCTTGCGGAGTATGTGCCAGTGAAGAAGGGAGATGCTGTTACGCTACACACTGACTCCAAAACACAGAGAAACGATCAGATacgctggatgtttggagagAAAACTCTCCTCGCTGAAATCAAAGAAGGGAGCGGAGAGATCTCTACATATGATGATGTTCTTAacgggagattcagagacagactgaagctggacgaGCGGACCGGATCACTGACCATCACTAACTTCACGACACAACACACTGGACTCTACACGGTGAAGATCAACAGAAGCGCAGAAACCTACAGAAACAagagttttgatgtttttgccaGAGGTGAAATTATTAAAGACCAGACCATTTATTTAGACCAGAACACtgcctttcttcttctctgaaATGCAGCAAACTGATAAAACAGCATCTAAAATCTTAGAAATTTCAAAGGGCTGTGCAGAATGACAATATATACTGTGACATTCAATATAATGTAAGTATTGTTGgagattttgacattttaattttttatcacaGTAAGCAAATATATCTATGTAGTATAGTGATACTTAAAGTTATTGTCCCgatacagttaaaataaaacatgcctgaataaaaaaaactattttgtgatAAGTCCTAAAGAAAATCTTGATCTCCtgatgttttcttgtgtttctctGTTCCTATGTGCCGCTGTGAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107712173, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222759.1 False 2629 mRNA 0.43 10 3309263 3315077
XM_043222760.1 True 2777 mRNA 0.42 9 3309760 3315077

Neighbor

gene id symbol gene type direction distance location
LOC122327550 NA coding downstream 4059 3290510 ~ 3305204 (-)
LOC122327353 NA coding downstream 22747 3280609 ~ 3286516 (-)
LOC122327437 NA coding downstream 31864 3273135 ~ 3277399 (-)
LOC122327520 LOC107694008,LOC107712191,LOC107566346,LOC107718469,LOC107698588,LOC107591183 coding downstream 55548 3252113 ~ 3253715 (-)
wu:fc11c11 LOC107702623,LOC107566345 coding downstream 65341 3239109 ~ 3243922 (-)
LOC122327542 NA coding upstream 241055 3556132 ~ 3559814 (-)
LOC122327357 NA coding upstream 415434 3730511 ~ 3735990 (-)
LOC122327402 NA coding upstream 421064 3736141 ~ 3741922 (-)
LOC122328131 NA coding upstream 427170 3742247 ~ 3744520 (-)
LOC122328132 LOC107570673,LOC107575767 coding upstream 429469 3744546 ~ 3747804 (-)
G149081 NA non-coding downstream 57792 3251249 ~ 3251471 (-)
G149076 NA non-coding downstream 66458 3242421 ~ 3242805 (-)
G149074 NA non-coding downstream 73504 3233672 ~ 3235759 (-)
G149071 NA non-coding downstream 114459 3193288 ~ 3194804 (-)
G148927 NA non-coding downstream 206366 3102579 ~ 3102897 (-)
G149111 NA non-coding upstream 35016 3350093 ~ 3353485 (-)
G149114 NA non-coding upstream 35377 3350454 ~ 3351474 (-)
G149112 NA non-coding upstream 53073 3368150 ~ 3372307 (-)
G149117 NA non-coding upstream 62192 3377269 ~ 3449101 (-)
G149118 NA non-coding upstream 80637 3395714 ~ 3414182 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other downstream 36212 3255396 ~ 3273051 (-)
dnase1l4.1 zgc:101000,LOC107566350,LOC107712182,LOC107702655 other downstream 77050 3224148 ~ 3232213 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other downstream 244086 3051400 ~ 3065177 (-)
gpr35.2 NA other downstream 1058702 2244631 ~ 2250561 (-)
LOC122328032 NA other downstream 1193080 2114320 ~ 2116183 (-)
si:rp71-36a1.1 NA other upstream 10498 3325575 ~ 3366122 (-)
LOC122327341 NA other upstream 62955 3378032 ~ 3451429 (-)
G149102 NA other upstream 73183 3388260 ~ 3414711 (-)
LOC122327463 NA other upstream 109269 3424346 ~ 3443874 (-)
LOC122328127 NA other upstream 329850 3644927 ~ 3652009 (-)

Expression


Co-expression Network