LOC122327491


Basic Information

Item Value
gene id LOC122327491
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5523238 ~ 5525432 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222899.1
CAGAAACCACAGTCGCACCAGCAActcttttaaaatgatcacatgCATGTTGCGTTTAGTCTCGGTCTTCATCTGTGTTGAAGgtgtgtttggttcTGATGGAGATGCAATAAAGTCAGTATCAGTGACTGAGGGAGATTCTGTCACTCTAAACACTGATGTTACTGAAGTACAGAGAGATGATCAGATACTGTGGATGCTTGGATCTAAAGACACCCGTATCGCTGAACTCTATAAGCACAGCGTTGATATGTTTAGCAGTAATGAGATGTTTGGAGACAGACTGGAGATGAACCCTttgactggatctctgaccttCAGAAACATCagaaccacagactctggactttataAACGACGGATCCACAGCAACAGCGGGAAATCAGAGAAGATATTCAACCTTACTGTCTAcgATCACCTGCCTGTTCCTCGCATCACCAAGTGTTCATCATCTAAAACCTGTTCAGTGTCCAGATGTTCACTGCTGTGTTCGGTGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattttccagcatcagtgtgtctgatctcagcagcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccagACATCTGAACATCAGTCAGCTCTGTCCACGATTTCCTTTCAGCTCTGTTGGCACTTCTGTGATTCCGTCCCTGATTTATGCTGCGGTGGGCGTGGCCGCCGTCGCGCTGCTCGTTTATTACGTCAGATCCAGAACGGACCGGAAAGAGAAAAAGCCACCATCACAACCCCAGCAACTCTTTTAGACGCCAGGTGGCAGTAACTTCACTCAAGTTCATGTGCGCTTCCCAAACGTAAATAAAAGCCCAGCTAAAGTGCTTCCTCGCAGTCGACCAAcattcttttttcattaaatcatcAGTTTGATAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222899.1 True 973 mRNA 0.46 4 5523238 5525432

Neighbor

gene id symbol gene type direction distance location
LOC122327326 NA coding downstream 27159 5492090 ~ 5496079 (-)
LOC122328171 NA coding downstream 32484 5481708 ~ 5490754 (-)
LOC122328170 NA coding downstream 42379 5471936 ~ 5480859 (-)
LOC122327381 NA coding downstream 89095 5430855 ~ 5434143 (-)
LOC122327375 LOC107570603,LOC107690762 coding downstream 144351 5373452 ~ 5378887 (-)
rdh5 rdh5,LOC107573570,LOC107653177,LOC107586996,LOC107745400 coding upstream 7764 5533196 ~ 5536573 (-)
rbck1 LOC107658397,LOC107745403,LOC107653168,LOC107573567,LOC107586913,LOC107720991 coding upstream 25197 5550629 ~ 5558239 (-)
stab1 stab1,LOC107745410,LOC107658393,LOC107653171,LOC107721010,LOC107593096 coding upstream 81612 5607044 ~ 5634799 (-)
ogna ogn,LOC107658388,LOC107756001,LOC107586921 coding upstream 156159 5681591 ~ 5687034 (-)
omd omd coding upstream 163904 5689336 ~ 5693764 (-)
G150121 NA non-coding downstream 10271 5508570 ~ 5512967 (-)
G150092 LOC107658400 non-coding downstream 17086 5497941 ~ 5506152 (-)
G150086 LOC107586973,LOC107676140,LOC107698552,LOC107712186,LOC107658401,LOC107676139,LOC107681664 non-coding downstream 52730 5418456 ~ 5470508 (-)
G150093 NA non-coding downstream 68906 5451436 ~ 5454332 (-)
LOC122327610 NA non-coding downstream 213348 5308250 ~ 5309890 (-)
G150161 tbc1d20,LOC107658381,LOC107586998,LOC107573569,LOC107653176,LOC107720987 non-coding upstream 19836 5545268 ~ 5545768 (-)
G150125 LOC107586915,LOC107745408,LOC107658396,LOC107721006,LOC107593072 non-coding upstream 54038 5579470 ~ 5583041 (-)
G150184 NA non-coding upstream 78725 5604157 ~ 5604418 (-)
G150126 wu:fb55g09,LOC107587000,LOC107755988,LOC107704455,LOC107720989,LOC107658378,LOC107593068 non-coding upstream 128619 5654051 ~ 5655376 (-)
G150152 NA non-coding upstream 297497 5822929 ~ 5823913 (-)
LOC122327354 NA other downstream 369382 5145926 ~ 5153856 (-)
LOC122327545 NA other downstream 786378 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 934816 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 1036313 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 1089738 4428805 ~ 4433500 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 1798 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 13124 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 112706 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 136309 5661741 ~ 5672809 (-)
LOC122327537 NA other upstream 232574 5758006 ~ 5763982 (-)

Expression


Co-expression Network