LOC122327494


Basic Information

Item Value
gene id LOC122327494
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5060198 ~ 5071072 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222903.1
CTCTATTTAAGTTAGCAGTCCGCCATAGAGAAAGAAAACCGTTAGCATCCGCCATTACAGATTCCCTTCTTTCCAGCGACGACTTTTGGTTTGAATAACGCAAACGTTCTTGTTCCACTTTTGTAGAATATAaagcatttgttatttaattagttaGTATATCTCTCTATAGGTGTTAACAGAGTTTTGTTAGCAGTCAGTCGGTTGATGGGTGTGGTTTGTCTCTTGCGTAAAAACCCAAAACGTTATAATAACCATAGTCATTTGCATTTGCCGGAATCTTCAACATtatgaaaacctttttaaaattgtttgtgatttttctgGTAATGTGCGgtgTGTTTGCGGCTGAACAAGTCAAAGAAAAGTCAATGATGGAGGGAGATTCTGTCACTCTAAACCCTGATCTCACTCAAATACAGAGAATTATTCAGATGCAGTGGAGATTTGGAGATCCGGGTCCAGTTATAGCTCAAATTGAGGAAAAGGAGATCTCATATACCAGTGATAAAGGATTCATTGACAGACTGCAGCTGgatcaaactggatctctgGTCATCAAgaacatgaaaacaaatcattctGGAATTTATAAACTAGAGATCAATACCAACAAAGAGACCTTATATGAGACATACAGAGTTACTGTGTATGAGTCTCCATCTGTTATAGATGCTGGTGAAGCAGAAAGGCAGCTCATGTCggtgatggagggagattctGTAACTCTAAATATTCCTCAACTACAAGGAAACGAGCTGATAGTGTGGAGGTCTGGAGATGACGGAAAACTCATAGCTAAACTTGATATAGAGACCAAAAGCTCACCATTATATTATgatgagagattcagagacagactggaACTGGATCAGACCGGATCTCTGATCATCACCAACACCAGAACCACAGATTCTGGACTTTATAGAGTGAAGATCAGCAGCAACAAACAGACCTTATACAAGAGATTCACTGTTACTGTCAGCGAACCAGGTCTTTCTTCAGCTGCTGTAGCAGGGATCATCTGTGCTTGCTTGATTCTGGTGCTAGCTGCCACCGctgctggtgttttttttatttacgcaCGAAATCTGAAGTAGA
>XM_043222904.1
CTCTATTTAAGTTAGCAGTCCGCCATAGAGAAAGAAAACCGTTAGCATCCGCCATTACAGATTCCCTTCTTTCCAGCGACGACTTTTGGTTTGAATAACGCAAACGTTCTTGTTCCACTTTTGTAGAATATAaagcatttgttatttaattagttaGTATATCTCTCTATAGGTGTTAACAGAGTTTTGTTAGCAGTCAGTCGGTTGATGGGTGTGGTTTGTCTCTTGCGTAAAAACCCAAAACGTTATAATAACCATAGTCATTTGCATTTGCCGGAATCTTCAACATtatgaaaacctttttaaaattgtttgtgatttttctgGTAATGTGCGAGAATTATTCAGATGCAGTGGAGATTTGGAGATCCGGGTCCAGTTATAGCTCAAATTGAGGAAAAGGAGATCTCATATACCAGTGATAAAGGATTCATTGACAGACTGCAGCTGgatcaaactggatctctgGTCATCAAgaacatgaaaacaaatcattctGGAATTTATAAACTAGAGATCAATACCAACAAAGAGACCTTATATGAGACATACAGAGTTACTGTGTATGAGTCTCCATCTGTTATAGATGCTGGTGAAGCAGAAAGGCAGCTCATGTCggtgatggagggagattctGTAACTCTAAATATTCCTCAACTACAAGGAAACGAGCTGATAGTGTGGAGGTCTGGAGATGACGGAAAACTCATAGCTAAACTTGATATAGAGACCAAAAGCTCACCATTATATTATgatgagagattcagagacagactggaACTGGATCAGACCGGATCTCTGATCATCACCAACACCAGAACCACAGATTCTGGACTTTATAGAGTGAAGATCAGCAGCAACAAACAGACCTTATACAAGAGATTCACTGTTACTGTCAGCGAACCAGGTCTTTCTTCAGCTGCTGTAGCAGGGATCATCTGTGCTTGCTTGATTCTGGTGCTAGCTGCCACCGctgctggtgttttttttatttacgcaCGAAATCTGAAGTAGA
>XM_043222905.1
TTCTCTATTTAAGTTAGCAGTCCGCCATAGAGAAAGAAAACCGTTAGCATCCGCCATTACAGATTCCCTTCTTTCCAGCGACGACTTTTGGTTTGAATAACGCAAACGTTCTTGTTCCACTTTTGTAGAATATAaagcatttgttatttaattagttaGTATATCTCTCTATAGGTGTTAACAGAGTTTTGTTAGCAGTCAGTCGGTTGATGGGTGTGGTTTGTCTCTTGCGTAAAAACCCAAAACGTTATAATAACCATAGTCATTTGCATTTGCCGGAATCTTCAACATtatgaaaacctttttaaaattgtttgtgatttttctgGTAATGTGCGgtgTGTTTGCGGCTGAACAAGTCAAAGAAAAGTCAATGATGGAGGGAGATTCTGTCACTCTAAACCCTGATCTCACTCAAATACAGAGAATTATTCAGATGCAGTGGAGATTTGGAGATCCGGGTCCAGTTATAGCTCAAATTGAGGAAAAGGAGATCTCATATACCAGTGATAAAGGATTCATTGACAGACTGCAGCTGgatcaaactggatctctgGTCATCAAgaacatgaaaacaaatcattctGGAATTTATAAACTAGAGATCAATACCAACAAAGAGACCTTATATGAGACATACAGAGTTACTGTGTATGAACCAGGTCTTTCTTCAGCTGCTGTAGCAGGGATCATCTGTGCTTGCTTGATTCTGGTGCTAGCTGCCACCGctgctggtgttttttttatttacgcaCGAAATCTGAAGTAGA
>XM_043222906.1
TTCTCTATTTAAGTTAGCAGTCCGCCATAGAGAAAGAAAACCGTTAGCATCCGCCATTACAGATTCCCTTCTTTCCAGCGACGACTTTTGGTTTGAATAACGCAAACGTTCTTGTTCCACTTTTGTAGAATATAaagcatttgttatttaattagttaGTATATCTCTCTATAGGTGTTAACAGAGTTTTGTTAGCAGTCAGTCGGTTGATGGGTGTGGTTTGTCTCTTGCGTAAAAACCCAAAACGTTATAATAACCATAGTCATTTGCATTTGCCGGAATCTTCAACATtatgaaaacctttttaaaattgtttgtgatttttctgGTAATGTGCGAGAATTATTCAGATGCAGTGGAGATTTGGAGATCCGGGTCCAGTTATAGCTCAAATTGAGGAAAAGGAGATCTCATATACCAGTGATAAAGGATTCATTGACAGACTGCAGCTGgatcaaactggatctctgGTCATCAAgaacatgaaaacaaatcattctGGAATTTATAAACTAGAGATCAATACCAACAAAGAGACCTTATATGAGACATACAGAGTTACTGTGTATGAACCAGGTCTTTCTTCAGCTGCTGTAGCAGGGATCATCTGTGCTTGCTTGATTCTGGTGCTAGCTGCCACCGctgctggtgttttttttatttacgcaCGAAATCTGAAGTAGACAAACAAAATTCGAAAATCTCGGAACGACAAGATGAAACATTGGCGATCTCTGAAAAACTAAAGGAAATGTCTGAGATCTCCACAAAACTAGCGGAAGATTGTGAAAAAGAATTGCCTGATGTATTAGAACACCATCAAACGTCGAGGATCTCTGAAAAACTAAAGGAAATGTTGAAGGACTCTAAACGACTAAAGGAACTGTCAAAACACTGTGAAAAAGAATTGTGCAAGATCTCTGACAGACTAAAGGAAATGTCTTCGAAAAAGAAAGGACAGAACTCTGAACAAGAAACACCTTTGGTTGATGCCATGATCAATGAAGACCAAGAAACGGGTGATGAAGGTGAAAAAAAAGGGCCAGTTATTATGAAGACACTGTTATAAGTCTagtgaataaaaagaaagACTCAGCTGGAAAAGGAATGAATGAAGAAGCACATGTTTTAAGTGACTGAGCAGCAGACAGCTAAGCCACGGGGAGTCtgatgacttaaaaaaaaaaattgtgaaaactGTTGCTAAAGCATCAACATTACTCAAAATTAATTCGCTACATATACATAATCTTAtcctttactttatttaaagtgaaagtaaaataaatatgcttgcatgtgttactttttgtttgcttgccgTTAATTACATAACATAAGTGGCTTTGGAATATAAGTAGCAGAACTTTTCAGATGATAAAATTAATAGTGAAGGTGAAATATTGTTGAATTAACTAACATGATTCATATTCTTTTGGTTTCTGTAAACAATATTCttaacaattacaaataaaaaaaataaaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222903.1 False 1101 mRNA 0.40 4 5067096 5071070
XM_043222904.1 False 1015 mRNA 0.40 4 5067096 5071070
XM_043222905.1 False 770 mRNA 0.39 3 5067096 5071072
XM_043222906.1 True 1488 mRNA 0.35 16 5060198 5071072

Neighbor

gene id symbol gene type direction distance location
LOC122327307 NA coding downstream 38756 5016091 ~ 5021442 (-)
asic1b asic1b,asic1,LOC107569540,LOC107727129 coding downstream 229699 4790547 ~ 4830499 (-)
smarcd1 smarcd1,LOC107698569,LOC107694342 coding downstream 274983 4777983 ~ 4785215 (-)
gpd1b gpd1b,LOC107698578,LOC107721242,LOC107727040,LOC107694423,LOC107566434 coding downstream 282985 4773807 ~ 4777213 (-)
LOC122327538 NA coding downstream 287455 4770578 ~ 4772743 (-)
LOC122327526 NA coding upstream 13768 5084840 ~ 5086512 (-)
LOC122328166 NA coding upstream 36281 5107353 ~ 5108551 (-)
LOC122327498 LOC107740712,LOC107755677 coding upstream 37688 5108760 ~ 5110661 (-)
LOC122327332 NA coding upstream 43095 5114167 ~ 5123251 (-)
LOC122327503 LOC107575528,LOC107709688,LOC107741386,LOC107568440 coding upstream 111869 5182941 ~ 5184286 (-)
G149955 LOC107698556 non-coding downstream 18271 4932449 ~ 5041927 (-)
G149962 NA non-coding downstream 56509 4991610 ~ 5003689 (-)
G149963 NA non-coding downstream 61022 4991961 ~ 4999176 (-)
LOC122327586 NA non-coding downstream 94425 4957401 ~ 4965773 (-)
G149956 NA non-coding downstream 120359 4939435 ~ 4939839 (-)
G150000 NA non-coding upstream 70175 5141247 ~ 5142179 (-)
LOC122327581 NA non-coding upstream 90300 5161372 ~ 5167342 (-)
G150008 NA non-coding upstream 106617 5177689 ~ 5181252 (-)
G150017 NA non-coding upstream 130250 5201322 ~ 5204007 (-)
G150025 LOC107683790,LOC107563976,LOC107744761 non-coding upstream 147763 5218835 ~ 5226874 (-)
LOC122327545 NA other downstream 323338 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 471776 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 573273 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 626698 4428805 ~ 4433500 (-)
LOC122327462 LOC107741386,LOC107698560 other downstream 778430 4272551 ~ 4281768 (-)
LOC122327354 NA other upstream 74854 5145926 ~ 5153856 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 456158 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 467484 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 567066 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 590669 5661741 ~ 5672809 (-)

Expression


Co-expression Network