LOC122327526


Basic Information

Item Value
gene id LOC122327526
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5084840 ~ 5086512 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222950.1
GTGAGgtcagtgatggagggagattctGTTACTCTAAACTCTGATCTTACTCAAATACAGTCTGATGATGAGATGATGTGGAAATATGACAACATTCTGATAGCTAAAATCTATGGGAAGGACAATAAGAGCAGGGTTTATAATGAAAGTGCTGACGgtagattcagagacagactggagctggatcagactggatctctgatcATCACAAACACCagaaccacagactctggactttataCAGCCTCCAGCAAAAACTCAGGAACAGTACTCTTCAGACTTACTGTCTACGCTCGTCTGTCTACTCCTGTCATTAGCAGAGACCCCTCTGTTTTCAGAACCTACCAGCATTGTTCACTGCTGTGTTCGGTGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcaatgtgtctgatctcagcatcagtctctctctaacTCTGGAGGTGGAACATCAGGAGAAAAACAACTATAGTTGTGTAGTGAACAATCCTGTCAGCAATCAGACCACACAGCTGAACATCACTCAACTTTGTCACATAAATTTAGATTTTATCCATTGTTGCGGTTCTACTGAAGCTGTGATCCGATTGGCCCTCTCTGCTCTGGTGGGCGTGGCTGCTGTTGCTGTGCTGGTTTATGAATTCAGATCCAGAAACCTTCGAGCAAAAGAGAGAGCAGATGTCGCAATCAAACAAGAATTAAACTGATTTTCCAACACGATCTCACCCCAACTCGTCACATATTGCCGCTTGGTCAAGGACCCTTTTGCATCACTTTTTTTGCAGCAAATTCAAAGGCCGTCAGACTGTGTTGGATTTTCACAAAGGTGTAGATGAATTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222950.1 True 872 mRNA 0.44 3 5084840 5086512

Neighbor

gene id symbol gene type direction distance location
LOC122327494 NA coding downstream 13768 5060198 ~ 5071072 (-)
LOC122327307 NA coding downstream 63398 5016091 ~ 5021442 (-)
asic1b asic1b,asic1,LOC107569540,LOC107727129 coding downstream 254341 4790547 ~ 4830499 (-)
smarcd1 smarcd1,LOC107698569,LOC107694342 coding downstream 299625 4777983 ~ 4785215 (-)
gpd1b gpd1b,LOC107698578,LOC107721242,LOC107727040,LOC107694423,LOC107566434 coding downstream 307627 4773807 ~ 4777213 (-)
LOC122328166 NA coding upstream 20841 5107353 ~ 5108551 (-)
LOC122327498 LOC107740712,LOC107755677 coding upstream 22248 5108760 ~ 5110661 (-)
LOC122327332 NA coding upstream 27655 5114167 ~ 5123251 (-)
LOC122327503 LOC107575528,LOC107709688,LOC107741386,LOC107568440 coding upstream 96429 5182941 ~ 5184286 (-)
LOC122327497 LOC107659626 coding upstream 192966 5279478 ~ 5280923 (-)
G149955 LOC107698556 non-coding downstream 42913 4932449 ~ 5041927 (-)
G149962 NA non-coding downstream 81151 4991610 ~ 5003689 (-)
G149963 NA non-coding downstream 85664 4991961 ~ 4999176 (-)
LOC122327586 NA non-coding downstream 119067 4957401 ~ 4965773 (-)
G149956 NA non-coding downstream 145001 4939435 ~ 4939839 (-)
G150000 NA non-coding upstream 54735 5141247 ~ 5142179 (-)
LOC122327581 NA non-coding upstream 74860 5161372 ~ 5167342 (-)
G150008 NA non-coding upstream 91177 5177689 ~ 5181252 (-)
G150017 NA non-coding upstream 114810 5201322 ~ 5204007 (-)
G150025 LOC107683790,LOC107563976,LOC107744761 non-coding upstream 132323 5218835 ~ 5226874 (-)
LOC122327545 NA other downstream 347980 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 496418 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 597915 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 651340 4428805 ~ 4433500 (-)
LOC122327462 LOC107741386,LOC107698560 other downstream 803072 4272551 ~ 4281768 (-)
LOC122327354 NA other upstream 59414 5145926 ~ 5153856 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 440718 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 452044 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 551626 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 575229 5661741 ~ 5672809 (-)

Expression


Co-expression Network