LOC122327538


Basic Information

Item Value
gene id LOC122327538
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4770578 ~ 4772743 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222976.1
GTACGCGTGGAGCCTCCCACTTTCACTTTTACTTTATCTAGTAAACAAGGAAACAAGGGTGCCTTTATTTGGCTTAATCTGCCTTTATGTTCAggcaaaaactgtgaaaatgaagaTTGTCTCAAAACCGCTCTCGGTGCTCGTGTTTTTACTCGTGTATGGTGTTGATTCAGCGAGGGTgtcagtgatggagggagattcaCTCACTCTACACACTGGTGctcaaaggaaacaaaaaagaCACATGAGATGGTGTTTGAGTAACAATTCAATCTTAAATCGCAATGAGATGTGTTTAGTTGGTCAGGGTAGTCATTTTGTTAATGAacgattcagagacagactgaagctggatcatCAGACTGGATCTTTGACCATCACGAATATCACAACTCGGCACACTGGACTCTATAAACTATTCTATAAACACATAAGCTTCTCGTCATCTGCTTTAAATAGTTTGATCCGTCCCTGTTGGCATTTAGTTCTTTAACCAAAGGCAAAGAGAATTGGGGTTAATCGAATGTTAAATGTGTTCATAATGTGAACTAACATATTTTTTCACCGTCACCAGTTATTTCATGTAGTGtaacttatcttttttttccctttgcagTAAAAGTCAAGTtacctttatttatacagtgcttTATACAAtgttgtgtcaaagcagctttacagtagctgtttgtgtttcaggtgtttctGCTGCTGAACAAGATGAAATTAAGAAAAAGTCAGTTATGGAGAGAGAATCTGTCACTTTATACAGTCGTTTAACAAACAACCCAAATACTTTGATAACATGGTATTTTAATGACACTCCCATTGCTGGAATCCCTGGAGATCAAAGTAAAATCTGTACGGATGTTCATTGTGATGCTGATGAGAGATTCAAAGACAGACTGGAGCTCGATCGGAcaggatctctgaccatcacgaaCATTGGAACAGAAGACTCTGGAGAATATAAACTACAGATCAGCAACAGCAGGTTCAGCATCATTAGGAGCTTCAGTGTTTCTGCTGTGTCTGGTGCAGGTGGTGTTCCAGTGTCAGTGAAGAATGGAGATTCAGTCACACTACTAACTGGTGTTAAAACAGAACAACAGGAAAGTATTATGTggtattttaatgacaaaacaatTGTTGAAATCACTGGATATGTCAGTAAGATCTGTACCAATTACTGGTGTAAAttgagattcagagacagactgaaggtCGATGAGtttggatctctgaccatcatgagCATCAGAGCTGAAGATAGAGATGgattttataaacaaatcatCGGTGGCCGCTTCGTATTTAGcttcagtttttaatttgtcatattttatcataatttcATGATGATACTCAAGAATATCTCATATTTTATCTCATGTGTGTCCAGGTCCATCTGCCACTATTTACTTTTATCTACCTTTAAGTCAAGGTATTTGCATAAACTGATTAGTGTATTGTGGATATAAGTTTCTGTCCaattaataaaattctaaatgaaaacACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222976.1 True 1519 mRNA 0.38 3 4770578 4772743

Neighbor

gene id symbol gene type direction distance location
LOC122328160 NA coding downstream 3050 4760030 ~ 4767528 (-)
LOC122327350 NA coding downstream 13146 4750241 ~ 4757432 (-)
LOC122327323 NA coding downstream 24621 4738382 ~ 4745957 (-)
LOC122327429 NA coding downstream 64719 4701963 ~ 4705859 (-)
LOC122327345 NA coding downstream 73283 4691094 ~ 4697295 (-)
gpd1b gpd1b,LOC107698578,LOC107721242,LOC107727040,LOC107694423,LOC107566434 coding upstream 1064 4773807 ~ 4777213 (-)
smarcd1 smarcd1,LOC107698569,LOC107694342 coding upstream 5240 4777983 ~ 4785215 (-)
asic1b asic1b,asic1,LOC107569540,LOC107727129 coding upstream 17804 4790547 ~ 4830499 (-)
LOC122327307 NA coding upstream 243348 5016091 ~ 5021442 (-)
LOC122327494 NA coding upstream 287455 5060198 ~ 5071072 (-)
G149594 NA non-coding downstream 89502 4679919 ~ 4681076 (-)
G149598 NA non-coding downstream 98808 4662075 ~ 4671770 (-)
G149592 LOC107729908,LOC107712186,LOC107702610,LOC107702613 non-coding downstream 144673 4625597 ~ 4625905 (-)
G149587 NA non-coding downstream 155693 4614307 ~ 4614885 (-)
G149586 NA non-coding downstream 159305 4610930 ~ 4611273 (-)
G149955 LOC107698556 non-coding upstream 159706 4932449 ~ 5041927 (-)
G149956 NA non-coding upstream 166692 4939435 ~ 4939839 (-)
LOC122327586 NA non-coding upstream 184658 4957401 ~ 4965773 (-)
G149962 NA non-coding upstream 218867 4991610 ~ 5003689 (-)
G149963 NA non-coding upstream 219218 4991961 ~ 4999176 (-)
LOC122327545 NA other downstream 33718 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 182156 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 283653 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 337078 4428805 ~ 4433500 (-)
LOC122327462 LOC107741386,LOC107698560 other downstream 488810 4272551 ~ 4281768 (-)
LOC122327354 NA other upstream 373183 5145926 ~ 5153856 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 754487 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 765813 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 865395 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 888998 5661741 ~ 5672809 (-)

Expression


Co-expression Network