LOC122327539


Basic Information

Item Value
gene id LOC122327539
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5789815 ~ 5793054 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222977.1
TAACCGGAAACCGAATGAACGAGGAACTCAAACGGGTTTGATTGCGCGTGGAGGCAAATGAGTTGTACCGCGCAGGTCCGAGCAGGTCCGAGGCAACATGAGCGTCCACCGAGAATCGGAGTCTAAACTGTCCCGCTACGGCGGGACGCTGTGCGGCGTCTTCACTCACGCGCTGTGCGCGCTCTTCACCGGCTTCATCGCCGCTCTGAGCAGACCTGGGTCCAGTCTGTTCTCGTGGCATCCGTTCCTCATGACTCTCGCTTTCTCCTTCTTCATGACGGAGGCCGTGCTTCTGTTCAACCCCTACTCGTCTCCCGTCAAGAAGCTGAAGCACAAAGCCAAGGGCCGCCTTCACTGGCTCCTGCAGGGCTCGTGCGTGTGCTGCGCGGTCGCGGGGCTGGCCGCCGTCTTCTACAACAAGCACCTCGGCGGCAAGCCGCACTTCAGCACGTGGCACGGGGCGCTCGGGGCCCTGACGGTGGCCGCCGCCGGGCTGCAGGCGCTCGGGGGGCTCCCGCTGCTCCACCCCAAACTGGCCCGGGGCCGGTCGAGGGCCGAGCTGAAGCGCTACCACGCCGCGTCCGGCCTGCTGGCGTACCTGCTGGGCAGCTCGAGCCTGTTCCTCGGCCTGCGCTCGGCGTGGTTCGGCGGCGTCGCCGGCGGGTTCGGAGGGGCCCTGGCCCCGCTCTGTCCCGTCCTGTGCGCTCTGGTCGTGATGAGTCAGGTCACGAACGCTTACATGGCTCGCAAGCCAATGCAGTACTGAAACCCAGCTCCATCGGCTGGACCGGactcattttatttgttatgaaCGTGTGCTCCGCAACCAACTTTGAATacctaaaaacaaatatttttatacccgttttatatttttgaatgcgTTTCATCAGTGCATGTTTTTTGGCGCAAACGACAAGGCAACTATTTTTCTTAAACGCCGGGAACAAAGATTGCGTTTATTAAACGATTTATAATTTTTACGCGTTTTTGCATGCGCTTATCAGCGCCAGTCCGACACGTTCTGTTCAACGAAACTGTTGCAGGAAATATTTATGCCAACAAAATTTTTTGTTGAATTAAACAATCATGAGAGAAAACATTTATGCgtttatattattaacatagTGGTAATAtcttatgcaaaaaaaaaaaaaattatttaaatgtcgCACAGTCTTTTTGCCGTTTAAGTAAACAGTTTGTAGATCATTAAAAACTGTCGAAAAcgtacatattattattatacagaagttgtttaatgacatttacAGATAATTTTtgataatcatttttttgtatagtattattttatacaaataaaaaaaaactgaattataagCTACAGGTATTTAACCTTTGtgccaatttttatttttctgtgctaTAACGGGTTATGTTTATGATTAAATGACACATGTAGATTTTTCATCctatacattttcacttttttctgtTCAATTAACTTCATAAAACCGCCTATTGTTATCACTAATAATTACTAACTacattttatgtgtatgtgtttatatatgtatgttatgtatatatgtgtgtatgcgtatatgtatatacacacacacagttattcTGAATACAGGAGGAGTAAGGTTTatgttaaaacaatatttaataaatacaatgtcaTTTGAA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K08371 CYB561D2; transmembrane reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222977.1 True 1653 mRNA 0.46 3 5789815 5793054

Neighbor

gene id symbol gene type direction distance location
bap1 bap1,LOC107704441,LOC107695622,LOC107755981 coding downstream 17742 5764038 ~ 5772073 (-)
LOC122327508 NA coding downstream 32637 5754395 ~ 5757178 (-)
shisa10.1 LOC107695620,LOC107756007 coding downstream 38733 5745190 ~ 5751082 (-)
si:dkey-42i9.4 si:dkey-42i9.4,LOC107586924,LOC107756006,LOC107704447,LOC107593103,LOC108431510 coding downstream 56273 5732383 ~ 5733542 (-)
ippk ippk,LOC107755999,LOC107658385 coding downstream 58410 5720053 ~ 5731405 (-)
sass6 sass6,LOC107756018,LOC107695611,LOC107731314 coding upstream 46694 5839748 ~ 5846930 (-)
arhgef18b arhgef18,LOC107695632,LOC107593089,LOC107586933,LOC107755984,LOC107704429 coding upstream 89772 5882826 ~ 5922490 (-)
insrb insrb,LOC107695633,LOC107586934,LOC107704428,LOC107593049 coding upstream 134462 5927516 ~ 5984443 (-)
atp6ap2 atp6ap2,LOC107663666,LOC107745967 coding upstream 218381 6011435 ~ 6016809 (-)
LOC122328173 LOC107708183,LOC107753648,LOC107696926,LOC103909885 coding upstream 303056 6096110 ~ 6097823 (-)
G150126 wu:fb55g09,LOC107587000,LOC107755988,LOC107704455,LOC107720989,LOC107658378,LOC107593068 non-coding downstream 134439 5654051 ~ 5655376 (-)
G150184 NA non-coding downstream 185397 5604157 ~ 5604418 (-)
G150125 LOC107586915,LOC107745408,LOC107658396,LOC107721006,LOC107593072 non-coding downstream 206774 5579470 ~ 5583041 (-)
G150161 tbc1d20,LOC107658381,LOC107586998,LOC107573569,LOC107653176,LOC107720987 non-coding downstream 244047 5545268 ~ 5545768 (-)
G150121 NA non-coding downstream 276848 5508570 ~ 5512967 (-)
G150152 NA non-coding upstream 29875 5822929 ~ 5823913 (-)
G150232 NA non-coding upstream 58231 5851285 ~ 5851890 (-)
G150233 NA non-coding upstream 61147 5854201 ~ 5854403 (-)
G150234 tmprss9,LOC107704409,LOC107731339,LOC107593090,LOC107695615,LOC107586983 non-coding upstream 61731 5854785 ~ 5855167 (-)
G150271 NA non-coding upstream 351824 6144878 ~ 6155016 (-)
LOC122327537 NA other downstream 25833 5758006 ~ 5763982 (-)
nol8 LOC107586918 other downstream 117006 5661741 ~ 5672809 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other downstream 137656 5638138 ~ 5652159 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other downstream 247735 5538556 ~ 5542080 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other downstream 257006 5527230 ~ 5532809 (-)
timm13 timm13,LOC107587003,LOC107731338,LOC106573564,LOC107593051 other upstream 66293 5859347 ~ 5861332 (-)
use1 use1,LOC107756022,LOC107745970,LOC107593088 other upstream 196443 5989497 ~ 5992758 (-)
G150276 npb,LOC107587005,LOC107663585,LOC107756033,LOC107704419,LOC107593099 other upstream 443198 6236252 ~ 6236865 (-)
gcga gcga,LOC107755995,LOC107663711,LOC107593098,LOC107704412,LOC107586984 other upstream 489402 6282456 ~ 6285580 (-)
G150440 r3hdm1,LOC107739334 other upstream 722511 6515565 ~ 6659352 (-)

Expression


Co-expression Network