zgc:194627


Basic Information

Item Value
gene id zgc:194627
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3153725 ~ 3155361 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222995.1
agtTGTTAAGTTCCGAGTATAGGACGCATGCGCTGTGGAGCAGGAAGCAGCGTATTAGCACTCAGACCAATACCAGAGGAGTTTAGAGGCGCGCATTTTCAAATTGAGATCGTTCTAACGCTTTTTCTGAACGCAACCCTTGACTGCAACATGTACCGACGGTTTCGTTTCATCTTTCTGTTTGCGCTGCTTATAGACACAGTCTCTCTGTATCATGTAGTCGAAAGCACCGAAGGAAGCTCTGTCGTCTTAAAGTGCGGTCACAGACGTGTTGTGCTTGAAGAACAGCTTCTGACAGTCCACTGGAGACACAACGACATCAGGAACGTATACGATATCATCCATGGAGAAGTTTCTGTAAAAGAACAAGACCCTGCATACAAGAACAGAGCAGAAGTTTTACCTGAGGAGCTTAAGAAGGGCCACGTCTCTCTCAAACTCACCGATCTTCAGCTCTCTGATGGAGGAACGTATCTCTGTTTTGTTCCAGCTTTGGGAATTGATCACAGCACACAACTGGTGGTCAAAGaACAACCATTACCCAAATATGCAGCAGTTCAAATAAGAAGCCATGGTACAGGAACGAGACTGGGAAAGATTTTGCACCTCCTAATACCTTTATCCGGACtcattttgcactttatttgaaCAGGCCTTTCTGGACATTCTTAGTGTCACTGAAGCAAAGAGCACGCTACAGCTTGTTATCTAGATCAGGATGAATATGGCACTATTCAGTCTGGAGTGGCACCAATTTTTAcgtttaacattttatgttgcactacttttatataatacttttacaCTGTACACTGGAGTGTATGAATtcaaattactaataaaaaaatcttaatggaACAATTTATAAGAAACATATGAATGAACAGTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222995.1 True 891 mRNA 0.42 4 3153725 3155361

Neighbor

gene id symbol gene type direction distance location
s1pr4 s1pr4,LOC107566363,LOC107727551,LOC107702636,LOC107718481,LOC107698562 coding downstream 41514 3108933 ~ 3112211 (-)
ncln ncln,ncl1,LOC107566356,LOC107727558,LOC107549377,LOC107718474 coding downstream 64269 3079929 ~ 3089456 (-)
zfr2 zfr2,LOC107742797,LOC107727559,LOC107698606,LOC107566358 coding downstream 119528 3017470 ~ 3034197 (-)
matk matk,LOC107702632,LOC107704492,LOC107566337 coding downstream 136317 3010087 ~ 3017408 (-)
rx1 rx1,LOC107704501,LOC107566365,LOC107742795,LOC107753738,LOC107549385 coding downstream 150930 2999104 ~ 3002795 (-)
LOC122327363 NA coding upstream 1073 3156434 ~ 3161742 (-)
LOC122327516 NA coding upstream 11612 3166973 ~ 3169896 (-)
LOC122327365 LOC107586973 coding upstream 14974 3170335 ~ 3177580 (-)
LOC122327372 NA coding upstream 25753 3181114 ~ 3185473 (-)
LOC122328126 LOC107702631,LOC107566362,LOC107698575,LOC107549383,LOC107712181 coding upstream 32673 3188034 ~ 3189883 (-)
G148927 NA non-coding downstream 50828 3102579 ~ 3102897 (-)
G148906 NA non-coding downstream 108308 3041452 ~ 3045417 (-)
G148889 NA non-coding downstream 169788 2874411 ~ 2983937 (-)
LOC122327605 NA non-coding downstream 255075 2895960 ~ 2898650 (-)
G148860 NA non-coding downstream 394038 2698113 ~ 2759687 (-)
G149071 NA non-coding upstream 37927 3193288 ~ 3194804 (-)
G149074 NA non-coding upstream 78311 3233672 ~ 3235759 (-)
G149076 NA non-coding upstream 87060 3242421 ~ 3242805 (-)
G149081 NA non-coding upstream 95888 3251249 ~ 3251471 (-)
G149111 NA non-coding upstream 194732 3350093 ~ 3353485 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other downstream 88548 3051400 ~ 3065177 (-)
gpr35.2 NA other downstream 903164 2244631 ~ 2250561 (-)
LOC122328032 NA other downstream 1037542 2114320 ~ 2116183 (-)
G148613 NA other downstream 1489098 1661185 ~ 1664627 (-)
G148574 NA other downstream 1499385 1643710 ~ 1654340 (-)
dnase1l4.1 zgc:101000,LOC107566350,LOC107712182,LOC107702655 other upstream 68787 3224148 ~ 3232213 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other upstream 100035 3255396 ~ 3273051 (-)
si:rp71-36a1.1 NA other upstream 170214 3325575 ~ 3366122 (-)
LOC122327341 NA other upstream 222671 3378032 ~ 3451429 (-)
G149102 NA other upstream 232899 3388260 ~ 3414711 (-)

Expression


Co-expression Network