slc30a7 (slc30a7,LOC107588064)


Basic Information

Item Value
gene id slc30a7
gene name slc30a7,LOC107588064
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8651809 ~ 8666722 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223097.1
TGCTCCGGGTCAGTGACACGACGCACGCGACGTCAGGGCTCCCCGCCGCCTCGCGTCCAGACGCTCGTGAAGCCGCAGCGCTGCCCGACGGCTACCGGAGACGCTCGGCGGAAAAAATGCTCCCGCTATCCATCAAAGATGACGAGTACAAGCCTGCCAAATTCAACCTGTTCGTCAAGATATCGGGCTGGTTCAGATCAATCCTTGCCGATAAAACCTCTCGCAATCTGTTTTTCTTCCTGTGTTTGAACCTGTCCTTCGCCTTCGTGGAGCTGCTGTACGGCATATGGAGTAACAGTTTAGGTTTGATATCGGATTCCTTTCACATGTTCTTTGACTGCACCGCTCTCCTGGCAGGCCTCGCGGCATCAGTCATTTCACGCTGGAGGTCCAATGACTCCTTCTCATACGGgtACGTCAGAGCAGAAGTGCTCGCGGGATTCGTGAATGGCCTTTTCCTCATCTTCACCGCCTTCTTCATCTTCTCAGAAGGAGTAGAGAGGGCGCTGGAGCCTCCAGATGTGCACCACGAGCGCCTGCTCCCGGTGTCTATAGCAGGGCTGCTGGTCAATCTCGTAGGAATATTCGTTTTTCAGCACGGAGGACATGGACATTCACACGGCGGCGAAGGTCATGGCCACAGTCATTCTCTATTTAATGGCAGTGTGGGACATGGACACAGTCATGGAGGCCACGGCCACAGTCACGAGTCCAAACACGGACACGACGATCACGGACATTCACACGGAGGACACGGACATTCACACGGAGGACACGGGCATTCACATGACGATCCCTGTGATGATGACCACTTGCACACACCGGGAAAGGGCTCCAGCAAGCAGATATTACAAGGAGTTTTCCTCCACATTGTTGCGGACACGCTGGGCAGTGTCGGCGTCATCATATCAGCCATCCTAATGCAAAAATACGACCTGATGATCGCCGACCCCATCTGCTCCATGCTCATCGCTCTTCTCATAGGAGTGAGTGTGGTTCCTCTGCTCAGGGAATCCATTGGGATCTTGATGCAACGGACGCCTCCTTCTCTGGACCATACCCTTCCTGAATGCTACCAAAGGGTCCAGCAGCTTCAGGGTGTCTATAACCTCCAAGAACCTCACTTCTGGACCCTTTGCACAGACGTCTACATCGGTACACTCAAACTCCTCGTGGCGCCTGACGCTGATTCTAGATGGATTCTCAGCCAAACGCACAACATTTTCACACAGGTTGGCGTCAGACAACTTTATGTTCAGATTGACGTGGCAGCCATGTAGAAGTCTGCCACACTTCTCCTGATCTTTGGGAGTCCCGGGACCAAAGGCCTTCTGTGCTGCTGTGGGGAAATTCTCCACCTTAACCCATCTCTTTTTGGGTTTCTGTCGCTCCACTTCCATCTTGGATCAAGATGGAGCTGGTGCAGTCCAGCAGTCTGACTCCACTCTTGCCAGAAAACAACTGACCAGCTGCAACAATGTGATGCTTTGAGGGGAAACAAGAACTTGCAACATTATTGCACCCTCTCGATCATTTGAACTTTTTGTATTTGAAGTTCCCCAATTGCTTTTGATTTTTATGATCCCATCAAACGGTTTATTTTCCTCATAATTGCTGACCTTTCCCATCATCAAAATGGGATTTTAATTATCAGTGGTATGAATGTGGAGTTCAGTGGACATTTGTAATAATAGCAGTATGTGATTTATTGACTCTGTTTTTGGACTCTCGTTTTTTGGTTGTAAAGAGGTGCAGAATTTGTTCGCCAATGccattatataaacataaatatttctcTGCATTTCTTAAGTGCCTTTTTAAAAACGATCATGGACAATCGCTTGGATCATGTTTGATGGTCAACATGAATGCGATGAAAACTGGATCTTTATGACCTTGAGTTCTGTCTACAATTAAAACATtcctttgca
>XM_043223098.1
ATCGGGCTGGTTCAGATCAATCCTTGCCGATAAAACCTCTCGCAATCTGTTTTTCTTCCTGTGTTTGAACCTGTCCTTCGCCTTCGTGGAGCTGCTGTACGGCATATGGAGTAACAGGTTTGATATCGGATTCCTTTCACATGTTCTTTGACTGCACCGCTCTCCTGGCAGGCCTCGCGGCATCAGTCATTTCACGCTGGAGGTCCAATGACTCCTTCTCATACGGgtACGTCAGAGCAGAAGTGCTCGCGGGATTCGTGAATGGCCTTTTCCTCATCTTCACCGCCTTCTTCATCTTCTCAGAAGGAGTAGAGAGGGCGCTGGAGCCTCCAGATGTGCACCACGAGCGCCTGCTCCCGGTGTCTATAGCAGGGCTGCTGGTCAATCTCGTAGGAATATTCGTTTTTCAGCACGGAGGACATGGACATTCACACGGCGGCGAAGGTCATGGCCACAGTCATTCTCTATTTAATGGCAGTGTGGGACATGGACACAGTCATGGAGGCCACGGCCACAGTCACGAGTCCAAACACGGACACGACGATCACGGACATTCACACGGAGGACACGGACATTCACACGGAGGACACGGGCATTCACATGACGATCCCTGTGATGATGACCACTTGCACACACCGGGAAAGGGCTCCAGCAAGCAGATATTACAAGGAGTTTTCCTCCACATTGTTGCGGACACGCTGGGCAGTGTCGGCGTCATCATATCAGCCATCCTAATGCAAAAATACGACCTGATGATCGCCGACCCCATCTGCTCCATGCTCATCGCTCTTCTCATAGGAGTGAGTGTGGTTCCTCTGCTCAGGGAATCCATTGGGATCTTGATGCAACGGACGCCTCCTTCTCTGGACCATACCCTTCCTGAATGCTACCAAAGGGTCCAGCAGCTTCAGGGTGTCTATAACCTCCAAGAACCTCACTTCTGGACCCTTTGCACAGACGTCTACATCGGTACACTCAAACTCCTCGTGGCGCCTGACGCTGATTCTAGATGGATTCTCAGCCAAACGCACAACATTTTCACACAGGTTGGCGTCAGACAACTTTATGTTCAGATTGACGTGGCAGCCATGTAGAAGTCTGCCACACTTCTCCTGATCTTTGGGAGTCCCGGGACCAAAGGCCTTCTGTGCTGCTGTGGGGAAATTCTCCACCTTAACCCATCTCTTTTTGGGTTTCTGTCGCTCCACTTCCATCTTGGATCAAGATGGAGCTGGTGCAGTCCAGCAGTCTGACTCCACTCTTGCCAGAAAACAACTGACCAGCTGCAACAATGTGATGCTTTGAGGGGAAACAAGAACTTGCAACATTATTGCACCCTCTCGATCATTTGAACTTTTTGTATTTGAAGTTCCCCAATTGCTTTTGATTTTTATGATCCCATCAAACGGTTTATTTTCCTCATAATTGCTGACCTTTCCCATCATCAAAATGGGATTTTAATTATCAGTGGTATGAATGTGGAGTTCAGTGGACATTTGTAATAATAGCAGTATGTGATTTATTGACTCTGTTTTTGGACTCTCGTTTTTTGGTTGTAAAGAGGTGCAGAATTTGTTCGCCAATGccattatataaacataaatatttctcTGCATTTCTTAAGTGCCTTTTTAAAAACGATCATGGACAATCGCTTGGATCATGTTTGATGGTCAACATGAATGCGATGAAAACTGGATCTTTATGACCTTGAGTTCTGTCTACAATTAAAACATtcctttgca

Function

symbol description
slc30a7 Predicted to enable zinc ion transmembrane transporter activity. Predicted to act upstream of or within zinc ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including blastoderm; notochord; prechordal plate; pronephric duct; and yolk. Orthologous to human SLC30A7 (solute carrier family 30 member 7).

NR:

description
zinc transporter 7 isoform X1

GO:

id name namespace
GO:0071577 zinc ion transmembrane transport biological_process
GO:0072511 divalent inorganic cation transport biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005385 zinc ion transmembrane transporter activity molecular_function

KEGG:

id description
K14692 SLC30A5_7, ZNT5_7, MTP, MSC2; solute carrier family 30 (zinc transporter), member 5/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223097.1 True 1931 mRNA 0.49 11 8651809 8666722
XM_043223098.1 False 1745 mRNA 0.48 11 8651809 8666541

Neighbor

gene id symbol gene type direction distance location
s1pr1 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 coding downstream 34192 8614242 ~ 8617617 (-)
eps15l1a eps15l1,eps15l1a,LOC107757482 coding downstream 82867 8546952 ~ 8568942 (-)
mrpl54 LOC107665512,LOC107588072,LOC107715089,LOC107561894,LOC107757478,LOC107683181 coding downstream 183377 8467114 ~ 8468432 (-)
malt2 malt2,LOC107561899,LOC107588074,LOC107653622,LOC107715088,LOC107757454 coding downstream 184812 8459294 ~ 8466997 (-)
safb LOC107715084,LOC107653619,LOC107561900,LOC107588075 coding downstream 193451 8451074 ~ 8458358 (-)
vcam1b LOC107669833,LOC107715100,LOC107592710 coding upstream 6784 8673506 ~ 8681447 (-)
gpr88 gpr88,LOC107715102,LOC107669805,LOC107592712,LOC107588121,LOC107653578 coding upstream 16283 8683005 ~ 8684494 (-)
cdc14ab cdc14ab,LOC107669826,LOC107715101,LOC107653633,LOC107588060,LOC107592738 coding upstream 20369 8687091 ~ 8725380 (-)
rtca rtca,LOC107715104,LOC107669846,LOC107653637 coding upstream 67436 8734158 ~ 8739243 (-)
trmt13 trmt13,LOC107588056,LOC107580953 coding upstream 85702 8752424 ~ 8757018 (-)
G151029 NA non-coding downstream 152448 8499126 ~ 8499361 (-)
G151015 NA non-coding downstream 182557 8468471 ~ 8469252 (-)
G151016 LOC107715086 non-coding downstream 231069 8419634 ~ 8420740 (-)
G151020 NA non-coding downstream 239116 8412443 ~ 8412693 (-)
G151017 NA non-coding downstream 241680 8409316 ~ 8410129 (-)
G151086 NA non-coding upstream 140386 8807108 ~ 8808535 (-)
G151110 NA non-coding upstream 249179 8915901 ~ 8917143 (-)
G151111 NA non-coding upstream 282066 8948788 ~ 8949027 (-)
G151112 NA non-coding upstream 282894 8949616 ~ 8950059 (-)
G151122 NA non-coding upstream 478583 9145305 ~ 9147301 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other downstream 39065 8600350 ~ 8612744 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other downstream 358601 8286372 ~ 8293208 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other downstream 1033411 7609856 ~ 7618398 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other downstream 1596247 7020754 ~ 7055562 (-)
G150492 ahr1b,LOC107653601,LOC107600975,LOC107751479,LOC107687868,LOC107586968,LOC107739322 other downstream 1738251 6906000 ~ 6913558 (-)
G151107 tal1,LOC107669848 other upstream 217399 8884121 ~ 8886941 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other upstream 346826 9013548 ~ 9171931 (-)
gpx4a gpx4a,LOC108429535 other upstream 831947 9498669 ~ 9503006 (-)
G151425 NA other upstream 1291089 9957811 ~ 9983147 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other upstream 1615300 10282022 ~ 10321663 (-)

Expression


Co-expression Network