LOC122327652 (LOC107755339,LOC107655386,LOC107722668,LOC107659332,LOC107565182,LOC107755338)


Basic Information

Item Value
gene id LOC122327652
gene name LOC107755339,LOC107655386,LOC107722668,LOC107659332,LOC107565182,LOC107755338
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 12616316 ~ 12633995 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223119.1
GATATTACGGTTATATCAGTTGTCCTGCTGTTGTCTCTGACTTATTCTGAGAGTTTAGTTCAGCAGGACGATGTTCTTTCCACTGCTGTTATGGACGGCTTTACTCTGTCACGTCTCAGATGCCCAGACTTCCTCTCAAAGACAGGATCCGGTCATAGACCAATCTCCAGCGTTTTATGTTTTAGCTCCTGCAAAGATAAGGCCTGGAACTAAACAGAACATCCTGCTGGAGGCTCACAAACTGTCCGAGGCGTTAGAAGTCACCATCACGGTCTATGATTATCCACTGTCTGACACTGTCTTAATGAGGGACTCGGTTACCCTCAGTTCAGAAAATAACTACAGTACCCTCAAAACCATTGAGattGATCCAACTCTGCTACAACCAGATGGAAAGAAGAAATATGTGAAGCTGGATGCTCAGTTTAGCAGATTTCATCGTGCAGAAAGAGTTTTACCAGTGTCTTTCCGCTCTGGATACATCTTCATTCAGACTGATAAACCGGTTTATAACCCTGGAGACACAGTGCGTTGCAGGGCTTTTGTGTCTGACACTGAATTCCGTGCTGCTGAGAGGACCATTTCTCTGGAACTTCAGAATCCAGATGGGATCGCAGTACATGGTATTTCCAGAGCCAAATCAATCGATGGGATTCTCTCTAACATTTACCCCCTCTCATCAGTGGTCAAGGAGGGCAGATGGAAAGTTGTTGCAAAGTTTAATCAGGGAAAAGAGAACATTTTCAGCAGAGAGTTTGAAGTCAAGAAATATGTCCTCCCAGCATTCAACGTCACTTTGACTCCAAAGACATCCCACCTCAGACTAGACACAGAAAAGTTGGAGGTGGAAATAACAGCCAGGTATCTTTATGGTGAACCAGTGAAAGGTGTTGCATATGTGCTGTTTGGTATTGAAATTGATGGTGAAAAGAAAAGACTCACGTCTATGaagcaaataaatgatCTGAACGGAGGAAAAGTTATTTTGACAATGGAAGAGATAAAGAAGGTCTATCCTGACACAAACAGCTTACTCGGTTCTTCTGTGTATGTTAAAGCATCAGTAATGACCAGCTCAGGTAGCGACCTTGTGGAAGCAGAGAAATCTGGTATTAAAATTGTCATGACACCCTACATGCTTTCCATCAGAGACACACCAAAGTATTTCATACCTGGCATGCCATTAGACATGACgGTTACCTTGAGTGACCACGATGGATCTCCAGTCCATAATATTCCTGTTAAAATTAGCCTTTTTCAAAACCCAATCACTGTACACAAAGGCACCATCAAAGTCTCCATCAACATGCCTAAGATGTACAGCTCAGATGCTGATACACAGATATTAAAGGTGGAGACAGTAGATCCTTTACTGAAACCAGAACAGCAGGCAGTTCAAGAGATACGTGTGGAGCCATATGCCTCATTTAATGACGACAGGAACTACCTGCACATCACGGTGGGCAGCAGTTCAGTGGTGGTGGGCAGCACACTCAACATCAAAGCTCACATCAAATCTATTCAACCAGAACGAAGAAAACTTGTGGAGCAACTAATGTATGCTGTGATAAGTAAAGGAAATATAATCCACGCTGCTAGGATGAATGTTAAAGACCTGGTCATCATAAACATTCCTCTGCTGGTTACCTCAGAAATGCTACCTGCGTTTCGCTTTGTGGCCTACTATATTTTGCCATGGCAACCCAGGGCGGAAGTGGTGGCGAACTCTGTATTTGTGGATGTGGAGGACCGGTGTGTTGGTTCGCTCAGCGTAGGACCATTGGAAGGAGAAAATGGAAATTCATACTTACCAGGCAGCAGCATTACATTTGAAGTGAAAGGAGACCCGGGGGCAAAGGTCAGCCTGGTTGCTGTGGATAATGCCATCTTCCTGTTAAGTAAAAGCCGTCTGACGCAGAAGAAGGTGTGGGAGGTGGTGGGTCAAGGTGATATGGGCTGCACCGCAGGAGGAGGAAGGAATAATATGGGTGTTTTCAGTGATGCAGGACTGATGTTTCATTCCAGCACAGGAGGATACACAGATTACAAAAATgATTGCTCCAGTAGATCTAGAAGAAGACGTTCTGCTGCCAAACTGCAGCTTAGAGCGCAACTGGAGAAGGTATATTCTGATGAGCTCCTGCAGAGATGTTGTGTGGACGGCATGAGGGAGATTCCCATGCCATATTCCTGCTACCGCCGCTCGCTCTACATCACTGAGGACTGGAGCTGTGTGTTGGCTTTCCTTCGCTGTTGTGCAGAGTACAGAGGAGAGGAGCTTGGTGTCGTGACCAGACCTCCGACAACAACCGCTCCACCAACCACCACCCCTCCGCTCACCATCAGCACCCATTTTCATGTGCCTTATTATGTTAGGGAACGTTTTATTAATCGTGCGCCAGTTCTTATTGCTTTGGCTGGGCGTTTAGGAGGAGTGTTAGAGGCcagtgataaaaacatcagagaagaagaagaggaggtggaggagtttGATGAAGATGATTTAGCTGACTTAGAGGACATTTACGTGCGCAGCAAGTTCTTCGAGTCATGGCTGTGGTCTGACATTACATTACCCAGTGTCACCAAGACTGATGGATTGGCTGTATTACCAGTAAACACTGTTCTTCCTGACAGCATCACTCAGTGGGGGTTTCTAGCCATCAGTGCTTCACCTCAGACAGGTTTCTGTGTAGCCGAACCTTATAATGTCCGTGCGTCAAAGTCATTCTTCATAGATCTGCGGCTGCCTCACTCGGTGTCCAGAAATGAACATGTGGAAATCAAAGCTGTGGTCCATAACTATATGAAGTCAGAACTAGAGGTCATGGTGATTCTGGAGAAGACAGAGGACATGTGTAGCGTGGCATTTACTGGACAACACAGACAGCAGGTTTCGGTTCCGGCCAGCTCATCCAAGCTGATTTCATACACCATCATCCCTCTTAAAACAGGAGAGCTTCCTCTACAGGTCACAGCTGTCGCAGCCTCTTTAATGGGGGAGGATGCTGTAAGAAAGAACCTGCGTGTGGTAgTTGAAGGCATCCAGACAATTAAAGTAAGGAGCTTTGTGCTCAACCCCTCGGAGAAAGGAGACAGCGCTGGTAAACAACAGATAGAAGTGGAAAAGATGCAGTTGGACGCCGTTGTGCCCAAATCTGTGCCGGAGACATTTGTCAATGTCAGAGGTGATTTGCTGGCAGACAGCATTGATAACTCTATTAAGGAGGACTCTCTGGCAGCGTTGATCCGGATGCCCGGTGGATGTGTGGAGCAGAACCTGGCCAGAATCACGCTGCCCCTCATTGCCACCCATTACCTGGACAGCAGTGGAAACTGGGACGCTGTGGGAGTAGATCGCAGACAAGAGGCCATCAAATACATCCAGACAGGGTATGAAAATCAGCTTAACTACCGGAAAAAGGATGACTCGTATCCTCCCTACGCCAAAGAGGGGACCAGCACATGGATCACTGCATACGTGGTGAAGGTTTTCTCCATGGCAAAATCATTTATAAGCATCAATGACAAGCATCTGTGTGGCCCTCTGGTGTACCTCCTCAAGAATAAACAGCGTCCTGATGGATCCTTTCAGGAGGACAATCCTGTCTATGACACCAGTATGACGGGAGGCCTTCAAGGCTCTGAATCCAGAGTGTCTCTGACCTCATTCGTGCTCATTGCTTTGGCAGAGGCACAAAATGCTGTTACCTGCCAAGAGCCAGATCTTGACATAAAGGACCAATTCAGAAAAGCAGCCTTGTACATAAAAGAGCATTACCCCCGGGTGAAGAGACCATACACAGCAGCTATAGCATGCTACGCTTTAGCGGTATCCAACTATGGCTGCATGAAGAGCACGTTACTAAATTTAGCATCACCTGATCGAACCCACTGGCCTGACTCTATTAATTATTTCTTCACGCTGGAAGCTACTGGCTATGCGTTGTTAGCTCTGATCAAAGGTGGCCACATGGAAGAGGCAGCCGTCCCCTTTCGATGGCTGAACGAGAAGCGTGGCATTGGAGGAGGATACGGCTCAACTCAGTCCACTATGGTGGTGCTACAGGCTCTGTCTGAATACCTGGTGAAAAGGCCTCCTCCTGAAGATCTCAATCTGTTGGTGGAGCTCAGTGTTCCTGGTCGCAGTGACATACGCTGGACCTTCAATCCAAAAATGGCACATGTGGCCCGATCTTCAAGGGTACCTCTTGACCAGACATTCACAGTGGAGGCTTCTGGGAAGGGCAAGGGTATTTTGGAGGTAGTGACGGTGTACCACCAGCTTCCTGATGTGTATGAGAACAGCACATGTAACGGCTTTCATCTGGACGTCTCCATCGCTGAGACTAGTGaaaaaccaCCATCAGATGTAGAAAAGTCATACAGACTTAATATCAGCGTGAGGGCTCTGGAGGGACGGCAGGTGAGGATGGTGATTCTGGACATCAGTCTGCCCACCGGCTTTGAGCCTGAAAACTCAGATTTAGAATTGCTCTCAAATTCAGTGGATCGCTACATCAACAACTTTCAAGTGGTGGACAACCTGAGTGACAGAGGATCCCTCATAATTCACCTGTTTAGGGTATCCAGTACTCAGACAGACACAATCACATTCAGACTGCATCAGAAATTTAAAGTGGGTCTCCTTCAGCCCTCCACTGTCACAGTGTACCAGTACTACAACAAAGATAAACGCTGTAGCAGGTTCTACTCTCCTCCAGAAGACAAAGAGCAGCTTGATCAAATCTGCAAAGACAACGTGTGTCGCTGCTCTCACGGTGACTGTTGTGTAATGAAGGAGGACTCCTCATCTTTCAGTACAAAACAGAGGAAGGCCACTGTGTGCAATGGATTGCATCATGTCTACAGGGTCAAGCTGATCAGCGTCAGCCAGAGTCACTACGACCAGTTTGAGATGGAGATTGTGCAGGTTATCAAAGAGGggTCAGAGGAAGGCCTGAACGAGAATGAAAGGAGGACGTTCCTCTCTCATGCGAGCTGTAGGACAGGACTTGGTTTGAGAGAGGGTCAGGACTATCTGATCATTGGGCCCATCAGAGATGTTTGGCACGCAGGGAGCACGTCCAACAAATTTGTGTATATGCTGGGTAAGGACACGTGGGTCGAGCGCTGGCCGTCTGAATCTGAATGTGGAGCTGGATCTGCACTGGAAAGGAAATGTGCCGAGTTGGAGAGCTTTGCAAAGGACCTGTCAGAAAGCGGCTGTCAAACTTAATGTGTttagtttatagtttataatGTGTTTAGTTTATAGTTTCAAGTATAGAAGGCAACATTGTCAAAACAATAAAGTCTAAAAGCAATGTA

Function

NR:

description
PREDICTED: complement C3-like

GO:

id name namespace
GO:0005615 extracellular space cellular_component
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223119.1 True 5331 mRNA 0.47 42 12616316 12633995

Neighbor

gene id symbol gene type direction distance location
LOC122327651 c3b.2,c3b.1,LOC107659332,LOC107755338,LOC107655386,LOC107565182,LOC107569121,LOC107755339,LOC107722668 coding downstream 788 12598143 ~ 12615528 (-)
LOC122327653 c3b.1,LOC107659332,LOC107722668,LOC107755339,LOC107565182,LOC107655386,LOC107755338 coding downstream 19851 12578511 ~ 12596465 (-)
LOC122327834 pet117,LOC107741527,LOC107570376 coding downstream 233981 12381291 ~ 12382335 (-)
kat14 kat14,csrp2bp,LOC107570376,LOC107659341,LOC107563531,LOC107655392 coding downstream 235605 12373609 ~ 12380711 (-)
nptxrb nptxrb,LOC107570379,LOC107715736,LOC107655393,LOC107664882 coding downstream 258823 12352906 ~ 12357493 (-)
yju2b ccdc130,LOC107655383,LOC107569130,LOC107722659,LOC107659306 coding upstream 975 12634970 ~ 12641329 (-)
wdr83 wdr83 coding upstream 16203 12650198 ~ 12653608 (-)
sde2 sde2 coding upstream 19946 12653941 ~ 12658148 (-)
capn1b LOC107755342,LOC107655377,LOC107565170,LOC107659327,LOC107722661 coding upstream 25179 12659174 ~ 12670694 (-)
capn2b capn2b,LOC107565172,LOC107659328,LOC107722663,LOC107655378,LOC107755344 coding upstream 36812 12670807 ~ 12681564 (-)
G152351 NA non-coding downstream 71189 12544901 ~ 12545127 (-)
G152341 LOC107659297,LOC107716435,LOC107569129,LOC107715742 non-coding downstream 136864 12474768 ~ 12479452 (-)
G152340 NA non-coding downstream 181360 12434581 ~ 12434956 (-)
G152339 NA non-coding downstream 189344 12426756 ~ 12426972 (-)
G152333 LOC107715704,LOC107655331,LOC107659303,LOC107570368 non-coding downstream 190228 12418358 ~ 12426088 (-)
G152363 NA non-coding upstream 49095 12683090 ~ 12683385 (-)
G152386 NA non-coding upstream 114227 12748222 ~ 12748440 (-)
LOC122327774 NA non-coding upstream 310299 12944294 ~ 12953144 (-)
G152454 NA non-coding upstream 368378 13002373 ~ 13002884 (-)
G152463 NA non-coding upstream 403384 13037379 ~ 13037599 (-)
LOC122328185 pdgfa,LOC107655387,LOC107716439,LOC107659307 other downstream 47589 12560843 ~ 12568727 (-)
polr3f polr3f,LOC107655353,LOC107715715 other downstream 252921 12357683 ~ 12363395 (-)
G152276 wdr47,wdr47b,LOC107741541,LOC107664763,LOC107564929,LOC107715726,LOC107655405 other downstream 470741 12142842 ~ 12145575 (-)
si:ch211-117l17.6 LOC107655409,LOC107715709,LOC107560696 other downstream 566778 12045469 ~ 12049538 (-)
LOC122327182 NA other downstream 771174 11841588 ~ 11845142 (-)
cxcl12b cxcl12b,LOC107566036,LOC107755354,LOC108440693,LOC107659313,LOC107566675 other upstream 272138 12906133 ~ 12914243 (-)
si:dkey-222p3.1 NA other upstream 564039 13198034 ~ 13202269 (-)
col8a1b col8a1b,col8a1,LOC107717673,LOC107602679,LOC107704548,LOC107571642,LOC107667898,LOC107720377,LOC108436628 other upstream 745694 13379689 ~ 13409999 (-)
LOC122327865 si:ch211-79m20.1,LOC107602672,LOC107691164,LOC107717652,LOC107559552,LOC107720370,LOC107667897,LOC107736246 other upstream 943806 13577801 ~ 13689619 (-)
adra2a adra2a,LOC107602669,LOC107717662,LOC107720367,LOC107667886,LOC107559550 other upstream 1191374 13825369 ~ 13829699 (-)

Expression


Co-expression Network