LOC122327679


Basic Information

Item Value
gene id LOC122327679
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 16233607 ~ 16237021 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223165.1
tctaaatatgattaataagtAACTGTACTACTTTTTTATCTCAAGCAATACAAATCAAGTACAGAAGAGTACATCAGGACACTATAAAAAGAGCATGAGAAACTGTGGGGACTGCAAAGTAAGAGCTACACACAAACATCAGTGAAGAATGGCTTGTTCAGGACAGGAAAATGAGATGAGTGAACAGATCAGCTCTgaggacagaaaacacagtcTGAACGATGGAGCTTCAGCTCAACAACGCTGCCATCAGTGCTTCTCTGACATCCACGCAGCATTAAGAGAGCTGACCGCCACAGTCACAGAGCAGAAAGCCAACATCAGAGCCTTAGAGACGCGGCTGAGAGAAGAGCTGAACAAGAAGACTGAGGAAATGTCAAATCTTACTCAAAGTGAGCTGGAGAAGTTGAGGAAGGAAATTACAGACAGAGAGATAGCATTTTCGGCTGCACTGACCAAATCTGGTGGTGGAAATGTTGGTCCTTTTACCACTGACATCACACTAGTTTACAAGAACGTCTTCACAAACATAGGGAACGCCTACAACCCCATTACAGGTATTTTCACAGCCCCACTGAAAGGAGCGTACATGTTCAGAATCTCTGTCTACAGTCCGGCTAGTCAATCAACTCCATCAACTGTCTACATGAAGAAGAATGGAAACAATGTGATTGTAGCACACGGTCATCAGGATCAGTTTGCGGTGAACGCCTCGAATGGAGCTGTGTTGGTCCTGGACGCTGGAGATGTCGTCTATGTCACTCTTTGTTCTAGCAGGATGATATTTGATAATGAATCTAATCACAGCACTTTCAGTGGATACCTACTGTTTCCCTTAAGAGGATAGGAATGTGGTTCCAGGAAGTCTGAACCTTTATCGATATGGTTTAAGATGAAAATCGTGAAGAATTGTTAACATGTGATCTAGGGGTAGAACAGATTGTGGAAAAGAAATCTACATTTCTCCACACATGTAATATAAACTAATCTGTTTTGTTGAAATAACATGTCAAACAAGATTGACTAGAGTAGATAACTGATCTTTATCTTGAGTTTGATTGACAGACAGCCTGACCAATCATAATCCTCACTTtttgtcaaacaaacaaaccagacaaGAGAGTCAGTGGTTTATGATCAGTGAACTTGTAAAATGGTATGCACTGTATTAGGGATGTTCTGCttgtaattatcatttatgtttaattcatgCTCTAACTAGAAGAGATTATCAGTTCATATGCTGATTAAATTACGGAGCTAGCTGCTCTACACTAATA

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223165.1 True 1280 mRNA 0.40 4 16233607 16237021

Neighbor

gene id symbol gene type direction distance location
LOC122327230 LOC107574244,LOC106946732 coding upstream 78056 16153142 ~ 16155551 (+)
trnaa-agc_28 NA coding upstream 83763 16149772 ~ 16149844 (+)
trnaa-agc_27 NA coding upstream 86470 16147065 ~ 16147137 (+)
trnaa-agc_26 NA coding upstream 87855 16145680 ~ 16145752 (+)
trnaa-agc_25 NA coding upstream 94685 16138850 ~ 16138922 (+)
LOC122328055 NA coding downstream 4142 16241163 ~ 16244542 (+)
sec13 sec13,LOC107719942,LOC107557974,LOC107691189,LOC107657312 coding downstream 92704 16329725 ~ 16337118 (+)
grip2b LOC107719945,LOC108436697,LOC107720331 coding downstream 145164 16382185 ~ 16477611 (+)
manf manf,LOC107677041,LOC107691893,LOC107592842,LOC107750980,LOC107567190,LOC107708486 coding downstream 513692 16750713 ~ 16752754 (+)
rbm15b rbm15b,LOC107592829,LOC107750977,LOC107708489,LOC107567194,LOC107691881,LOC107677039 coding downstream 515882 16752903 ~ 16756930 (+)
G153321 NA non-coding upstream 250785 15982592 ~ 15982822 (+)
G153320 NA non-coding upstream 252261 15981122 ~ 15981346 (+)
G153236 NA non-coding upstream 396853 15835260 ~ 15836754 (+)
G153231 NA non-coding upstream 402516 15827770 ~ 15831091 (+)
G153233 NA non-coding upstream 419521 15795830 ~ 15814086 (+)
G153364 NA non-coding downstream 13419 16250440 ~ 16250973 (+)
G153399 NA non-coding downstream 66710 16303731 ~ 16305650 (+)
G153418 NA non-coding downstream 183631 16420652 ~ 16481470 (+)
G153434 NA non-coding downstream 264733 16501754 ~ 16502104 (+)
LOC122327176 NA non-coding downstream 285609 16522630 ~ 16526808 (+)
LOC122327131 NA other upstream 61978 16163383 ~ 16171629 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other upstream 154712 16077581 ~ 16078895 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other upstream 197992 16004564 ~ 16035615 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other upstream 521521 15623093 ~ 15712086 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other upstream 1013843 15195916 ~ 15219764 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other downstream 80366 16317387 ~ 16386176 (+)
G153432 slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730 other downstream 256681 16493702 ~ 16499413 (+)
dock3 dock3,LOC107592830,LOC107691882,LOC107567192 other downstream 363609 16600630 ~ 16749928 (+)
tsc22d2 tsc22d2,LOC107732673,LOC107679060,LOC107701225,LOC107568259,LOC107720398,LOC107551385 other downstream 1162284 17399305 ~ 17419244 (+)
G153741 LOC107661227 other downstream 1689330 17926351 ~ 17927244 (+)

Expression


Co-expression Network