si:dkey-110c1.10 (si:dkey-110c1.10,LOC107719586,LOC107586382,LOC107729664)


Basic Information

Item Value
gene id si:dkey-110c1.10
gene name si:dkey-110c1.10,LOC107719586,LOC107586382,LOC107729664
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10760372 ~ 10776235 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223243.1
CAAAGGGCACGGGGGCCGGTCGCTCGCTCTGAGATACAAATTAAAAGAACAGCTGAAGTTTTAGTGAGGTCTCCTTTGAGCTGTCAAAGCAGAACTTTCTGGCCAGATGGCAACCACAGAGCTCTACACAAAGGGGGCATGTGTGTGGGTGCCAGACCCAGAAGCTGTGTGGGTGTCTGCCCAGCTGCCTCAAGACTACCGTCCTGGAGACCAGCACATACGAATCCAACTCACTGATGGCAGAGAGATGGAGTATCCGGTGTCGCCTCCATCGGGTCTTCCTCCTCTAGGTAACCCTGATATTTTGGAGGGAGAAAATGACCTCACAGCTCTAACCTTCCTCCACGAGCCAGCAGTGCTACACAACTTGCGTGTGCGCTTTCTCGACTACAGTAGCATTTACACTTATTGCGGGATTGTGTTGGTGGCGTTAAATCCATATGAACAGTTGCCCATTTATGGAGAAGAAGTGATCGATGCTTACAGCGGCCAAGACATGGCTGATATGGAGCCACACATTTTTTCTGTGGCTGAAGAGGCATACCGAACTATGATCAGagAGGAGAAAAACCAATCCATCATAATCAGTGGAGAATCAGGTTCAGGTAAAACTGTATCTGCTAAGTTCACCATGCGTTACTTTGCTGTCGTGGGTGGTGCGGCCCAGCAGACCAGTGTGGAGGAGAAAGTGCTGGCATCAAATCCCATCATGGAGGCGATTGGTAATGCAAAAACAACCAGAAACGACAACAGCAGTCGTTTTGGAAAGTATATTGAGATAGGATTTGGACGTAAAGGAGATATAATTGGGGCAAACATGAGGACCTACTTGTTGGAGAAATCGAGAGTTGTTTTTCAGGCAGCTCAAGAAAGAAACTACCACATCTTCTTCCAGCTTTGTGCTTCCAGGGATTTGCCAGAGCTGAGGACACTTAAACTTGATTCTGCAGAGAACTTTCATTACACCAACCAAGGACAAGATGTGCACATTTCTGGCACAGATGATGCGGTTGAGCTAGAGCGGACAAGAAATGCCTTTACTATTCTTgGAGTGCAGCCTGACCAGCAGATGGAGATATTTCATATACTGGCAGCCATTCTTCATCTGGGGAATATCAACATACAAGCCAGTGGTCGTGGTGGGGACCGGAGCTACattgatGCCAATGATCGTTCGTTGGCCATCTTTGCCAAGCTTTTAGGGGTGGAAGGTACTCAGATGGGCCAATGGTTATGCCACAGACGATTGGCAGTGGGTGGGGAAATGCTTGTGAAGCCCATGACAGGTCAGCAGGCTAATGAAGCAAGGGATGCTCTAGCTAAGCATGTGTATGAGCAACTGTTCACTTGGACAGTGCAGAGGCTGAATTCATCCTTAAGAGCGCACCGGGAACAGCCCAAATCTTTTATAGGAGTTCTTGATATCTATGGGTTTGAGACTTTTGACAGGAATAGTTTTGAGCAATTCTGTATTAACTACGCCAACGAGAAACTCCAACAGCAGTTCAACAGGCACGTGTTTCAGCTAGAGCAGGAGGAATATCTGCGAGAGGAACTTCCTTGGAACCGTATTGAGTTCAGTGATAACCAGCCGTGCATTGCACTCATTGAAGGCCAACTGGGCCTACTTGATCTTCTGGATGAAGAATGCAGAATGCCTAAAGGCTCAGATGAGAACTGGGCTCGGAAGCTTTACGACCAGCACCTGAAACACAGCACTCACTTTCGTAAACCACGCATGTCCAACTCTGCCTTCATCATTGTGCATTTTGCTGATATGgtccAGTACGATTGCGATGGCTTTTTAGACAAGAACCGAGACACTGTATTTGAGGAGCCCATCAATATACTGAGAGCTAGCCAGTCAGAACTAGTTGCTGAGTTGTTTCAGAAGGAGTCAGCAGGTGGATCACTCCCCAACTCCTCTCTTGCAAACGGGAGCATACGTTCAGGAAAGAGAGCTCATCGAGAGCACAAATTAACTGTTGGCTATCAGTTTCGTCAATCCCTGCAACTTTTGATGGACACCTTGAACAGCACCACACCGCATTATGTCCGCTGCATAAAGTCCAATGACCTCAAAAAGCCATTTCTATTTGATCCTAAGCGAGCAGTGCAGCAATTGCGAGCATGTGGAGTCTTGGAGACCATCCGAATAAGTGCTGCAGGCTACCCCTCCAGGTGGACATACAATGAATTCTACACTCGTTATCGAGTGCTGCTACATGGCTCTGTTCCTAAAGATGATATGCGCCATTCCTGCCAGAGTGCTCTTCCTGATCTCATCCCTGATCCAGAACAGTACTGCTTTGGCAAGACCAAGGTTTTCTTCCGGGCCGGACAGGTTGCAGTGCTGGAGAAGCTGAGAGGGGATCGCCTGCATGCGGCAGGAGTTTTGATCCAAAGCTGGGTGAGAGGATGGCTGCAGCGTAGGTATTATCAGCGGCTCCGGTGGGCTACCTTCATCCTGCAGCGCTACATAAGAGGAACACTGGCCCGAAGGTTGGCTTGGAGCCTCCGTTACACACGTGCAGCTTTAATCATCCAGAAAATGTACCGCATGCTGGTTGTGCGACAGCTTTATCTCACCATCAGAGAGGCCACCATCAAAATCCAGGCCTTCATCAGAGGCACTCAGGCTCGTCGGATTTATAGACAGATGCTGACCGAGCGGGCGGCGGTGTTCTTGCAGGCGCGGGTGCGAGGCTGGCAGGCCCGGCGCAGTTTCAGACACATCAGGGCTGCCGTGGTGCTCCTGCAGTGCTGCGTGCGCAGGCGAGCGGCAAGGAGAGAGCTCCTGCGCCTGCGTGCTGAGGCTCGATCGGTGGAGAAATACAGAGAACTCAATAAAGGCATGGAAGTCAAACTCATTCAGCTGCAGCTCCGAGCTGACCAACAGgcGAGAGAGAGTGCGTCTCTGAGGGAGACTCTTCAGGCCGAGCGAGAAGCTCACAGCTGTGAGCTGGAACAGCTGCGGTCCGGCCTCTTCAAACTCCAGAACCAGCTGCAGGAGAGCGCAAACATTGCTCCTTCACTCACGGACAAACAAGAGAAGGACAGGAGGAGAGCCGAGGAGAAAGCTGCACAAGAGATCCTCCAGCTTACACAAGAAATCCAAGCTCTCCGAGATGAGAGAGATTCTTTGGAGAAAGCGAGGGACGATCTGGCCATTCGTTTGCAGGATCAGGAAAAAGCTCTGGAGGAGAAGCGTCAGCAGACTGTGGATCAGGCAGATGCATCAGTGCGAGCGGAGCTGGATGAGGAGAGGAGGAGATACCAGAGTTTACTCAGAGAATTCACACGACTAGAGCAAAGATACGACAACCTGAGAGACATGAGCCTGTTTACAACCAATGAGCGTTCACGTGGACACAGACGAACAGATTCGACTGTGTCTCTGGAGCCTCTCTCGCCCGTCTCCGCACCGTTCCCCAGCTCGCCCGTCTTCCCTTCCCCTGAGGAGGTGAGGAGGATCAGCGTGACGTCGCCCACCGACAGGAGGCCCTGGAGAGACGAGCAGCCTCTGAACGTCCTAATGGAGGATATGAGCGTTGCGAAAGACACTGCCGAAAGCATGAAGGGGGAGGACCTCCGATGCGCTTACGACGCTGTACGGGTGGCCAACAAGTTCCTAGAGAGGCAGCTGTTGTCTCAGAGAGCGCAGTGGGAGCAGGAGATGTCAGATCTCCGGATGAAACTCCAGCAGGCTCAAGATACGCCTGGAGATCCTGAGATAAATgACCTGACAGAGCGGGTGGTGGTTCGAGAGCAGGAATGCGTCCGGCTGCGACGGGAACTCGAGGAACTGAAACACACTGTGAGCCTCAGGAGAATCCTGTCTTACGCAGGCGTAGCTACGACCGCGTCCCAGGACCCGACGTCTCCTGGCCCTCAGAAGAGCCCGATGCTGACCGGACTGCTGGAGTGCAGGAAGAAAGATGAGAGCAAGCTGATCAAACAGCTCATAACAGACGCGAGGGTGGAGGGTGTCTTGTCGTTGCCCCCCGGCCTGGCGGCTCGGgtgttgtttctgtgtgtgcggCAGGCGGACTGCAGCGGTGATCAGACGCGGGTGAAGGGGCTCTGCAGTGCTGCCGCGGGCGCCATTAAAACCGCCCTGAAGAAACACGGGAATGATCTGGACGTGACGGCTGTGTGGCTGAAGAACGCTTACCTGCTCAAAGACCTGCTCTGCCAGCACTCTCCCCGACAGGACGGCAGGGGCTCAGAGGAGCTGGTTCCTCTGGTGACGGATGTGCAGGACTCTGTCCGGACTCTCAGTGATCTGTGTATTCAGGCCTATCAGCAGCTGCTGTCCATCTCTGAGAGTCGCCTGCAACCCATCATCGTCCCAGCCATGCTTGAGAGTGAGACCATTCCTGGCCTGGCTGTATCTTCAGTGAAGCTGAGCTCCGGTCGTAAGCGTGCAGGATCTGACCCCCGACCTCCAGCCAGCGTGGAGGGAGCGACTATGTCAGGGGTCCTGAGGGAGCTGTCTGCGCTGCACACGGCCCTGTCCCGTCAGGACCTGCCCTCGGCCCTGCAGGAGCAAGCCTTCCGGCAGCTCATGTACCTGCTGGCCGCCTCCACCCTCAACAGCCTGCTGCTGCGCAAGGACATGTGCTGCTGGAACCGCGGCCTGCAGATCAGGTATAATGTGAGTTTACTGGAGGAGTGGCTGCGCAGTCGTTCTCTGCAGACAGGAGGCGCTGTGACTGCGCTGGAGCCACTCATACAAGCAGCGCAGCTCCTTCAGATGAGCAAGAAGACTGAAGCTGATGGACAGGCCATGGTCCGAGCCTGCAATGAACTGTCCAACCAGCAGATGGTGAAGATTTTAAGCCTTTATACACCTCAGAGTGACCTTGAAGAGAGAGTAACGCTCAATTTCATCCGTATAGTGCAGGGGCTGCTGAAGGGCCGTTCTGAGGGGCAACCTCCACAGCTTCTGATGGATGTCAGACGGGTGTTCCCCGTCACGTTCCCTTATCTGCCTCCACCGCAAGTCAGTGCCGCCCAGCTGGAAATCCCAGAGTCCCTCAAGATCTCCTTCCTACGCAGGGTCTGAACGCGGGGGTTCCTTTGCCtcctgaaatgcatttttttttttttgcctttgccTTACAACCTCACTTTAAAACATTATCTGGGCATTTTGTGTATGGCATGCTAATTTTaggtgcattttaaatgtaaaatgatgttacctttaaaaatacctatttgaaatgtaaagattttaaacgtaaatataaaat

Function

NR:

description
unconventional myosin-Vb-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223243.1 True 5258 mRNA 0.52 35 10760372 10776235

Neighbor

gene id symbol gene type direction distance location
btbd2a btbd2,btbd2a,LOC107719589,LOC107675907,LOC107586379,LOC107655211,LOC108435919 coding downstream 45212 10710570 ~ 10715160 (-)
creb3l3a creb3l3a,LOC107675914,LOC107719590,LOC107729712,LOC107586456,LOC107655213,LOC107596868 coding downstream 57798 10696357 ~ 10702574 (-)
rxfp3.2b rxfp3.2b,LOC107729713,LOC107719591,LOC107675915,LOC107586455,LOC107596869,LOC107655214,LOC108435892 coding downstream 67594 10689006 ~ 10692778 (-)
zgc:165603 celf5a,LOC107719642,LOC107655216 coding downstream 109420 10626786 ~ 10650952 (-)
LOC122328192 NA coding downstream 364203 10394012 ~ 10396169 (-)
mbd3b mbd3b,LOC107676983,LOC107586384,LOC107719585,LOC107655167,LOC107729711 coding upstream 239 10776474 ~ 10783278 (-)
tcf3b tcf3,LOC107596874,LOC107676964,LOC107719584 coding upstream 8643 10784878 ~ 10806576 (-)
zbtb7a LOC107729681,LOC107586386,LOC107719583 coding upstream 39878 10816113 ~ 10834215 (-)
map2k2a map2k2a,LOC107586388,LOC107729695,LOC107655207,LOC107596877,LOC108430106 coding upstream 59437 10835672 ~ 10843376 (-)
pias4a pias4a,LOC107586389,LOC107655204,LOC107596878,LOC107676972 coding upstream 67570 10843805 ~ 10852179 (-)
G151616 NA non-coding downstream 44415 10715425 ~ 10715957 (-)
G151612 NA non-coding downstream 50622 10709202 ~ 10709750 (-)
G151572 NA non-coding downstream 304741 10455371 ~ 10455631 (-)
G151569 NA non-coding downstream 317634 10442487 ~ 10442738 (-)
G151508 NA non-coding downstream 384412 10375641 ~ 10375960 (-)
G151668 NA non-coding upstream 7403 10783638 ~ 10784242 (-)
G151702 NA non-coding upstream 154647 10930882 ~ 10932509 (-)
G151704 NA non-coding upstream 156759 10932994 ~ 10933421 (-)
G151762 NA non-coding upstream 267762 11043997 ~ 11046227 (-)
LOC122327759 NA non-coding upstream 379552 11155787 ~ 11159729 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other downstream 338018 10419127 ~ 10422354 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other downstream 438709 10282022 ~ 10321663 (-)
G151425 NA other downstream 777225 9957811 ~ 9983147 (-)
gpx4a gpx4a,LOC108429535 other downstream 1257366 9498669 ~ 9503006 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other downstream 1588441 9013548 ~ 9171931 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other upstream 158817 10935052 ~ 10994952 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other upstream 397908 11174143 ~ 11188692 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other upstream 453739 11229974 ~ 11231249 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other upstream 689617 11465852 ~ 11490654 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other upstream 1017338 11793573 ~ 11804698 (-)

Expression


Co-expression Network