creb3l3a (creb3l3a,LOC107675914,LOC107719590,LOC107729712,LOC107586456,LOC107655213,LOC107596868)


Basic Information

Item Value
gene id creb3l3a
gene name creb3l3a,LOC107675914,LOC107719590,LOC107729712,LOC107586456,LOC107655213,LOC107596868
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10696357 ~ 10702574 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223289.1
CGTTGGAGTTCGAACTTTGTCCTGGGTGAGCAGAGGGACAAAGACAAAGTAAGGATTGacatatattttggttttgtctCATTTTGCGCATTTTTTCAAGAATATTTTAGATTTGGTTACCCCTGGGTCACAGCAATGGAGAACTATTCAGACCAGGGTGGTGAAGGGATAGAACTACTCGATTTGCTCTTTGATAAGAATGACGGCATCTTACGGCATGAGACTATGGGACCACAAAGCGATCAGCCTTGGCCAGTTCAAGATCCTCACATGATGATGCCCGCTCAGGGTAACGAAGAGTTCTTCAACGCACTTTTAGGTGGCTATGACTCTGTTTCTGGATCTCCAGTTTGGTCGCCCTCTCCCAGCGACAGCGGGATCAGCGAAGATCCTCATTCGGATCACATCGACAGTCCGCCGCCAACCGCAAGCCCTCTTCCGGAGCCTCGCATCGTCACATCCCAGGCGCATATCCACAGCCTCGACACCAACTTCCCTTTTAATTTCAATGGCTGGGAGACTGGCTTCTTCCCAGAGAGGGCCGGAGGGATGCAGCGTGCATCTGAAACACCGCAGGCACAACCGAATACTGGATTCCCCCTAACTGTCAAGGACCTGCTGCTATCTGGCACACCAGAGCCTGCCACAAAGGCAACCCAGCAGTCCTACCAGGAGCTGGTTCTCACAGAGGATGAGAAACGACTACTTGCCAAGGAAGGACTGACTCTGCCAAATCAGTTCCCGCTCACTAAGTACGAGGAAAGGATTCTGAAGAAAATCCGCCGAAAGATCCGCAACAAGCAGTCGGCCCAAGAGagcaggaagaagaagaaagaataCATCGACGGCCTGGAGAGCAGGATGGCGGCATGCAGCACACACAACCAGGAGCTGCAGAGGAAAGTCTTCCAGCTGGAGAAATGCAACATATCCCTGATGGAACAACTGCGTCGGCTGCAGGCGATGGTCATGAATGGATCCAACAAAACGGCCCAGACTGGGACCTGCATTCTGGTGCTGCTTCTGTCTTTCACCTTGATTCTGCTGCCCAATCTGAAGCCCTTCACAGATACCAAGGTCAGCCAACATGGAGACTTCAGCCCATTGAGAGTTCAATCACGGTCACTGCGCAACCTTCAGTCTTCCCGCGCCCTGGAGCATCCGTTCTCCGTGTCTGAGGACTCCAAAATGCTCCCGCGCTTCTCTGAGGATAAAAGCATGGCGGAGATAGCGTCGCTGCTGGGAAGACTTCACAGGAGGCCAGAATTCACCAATTACGATTCTGAGTCTCACAACCACAGTATAGACCAGCATGACGACCATCACCATGGAGACCCCATCACTGGGCATGTAGCGACAGTGACCTTGAATCCACGACGTGGCTCAAGGCGGAGTCCTCATGCTGATGATATGTGAAGGGCAGAAGGGGATTTACCCGGGGATTTGTCAAAACTCCTTCAACAGCGCTTCTGAAGACGGGGGCCAGCAAACAGATTGCTGGAAgctcttttctcttctttctgctgaagtaatttaaaaagataCAGTACAcagctgcttatttatacattatcaaACTTTGGATAAAATAACAAGTCCGATTTTATCTGTTGATTTGGAATGCTTGCCTTTTAAGCTTGCCACAAGCAGATagtctttcctttttttgtttaaatgcagcgGGGTCCAAACAAAACTGCGCGTTTCTGTTTAAAACAAGGCACAACTATTTTTTAACTGACTGCAGATTATCTTGCTTGTTTATTTAGGCTACACACTAAATAGACTAAACGTGACATACTGGTATggaattattttacaatattacctgtaaaaaaagaagtttCTGCTATGACAAAATAGTCCGCTATACAACTTACAAAACAATCGGGCTTGCAACGAGACGAATGCTGAAATAGTATTGATAGCCTATTAATACTGCTCTCAGGTAATTTTCTCTACAATCGATAACCGAGAGTCTGAGATGCAAGATGGAGGCAGTTGCGTTTGTATAAAGCGAGTGAAAGTACTGCCGATTTTATTTGCCCGGAAGAGTTGCCATGGGAAATATAAAACTCCCTTTAACTATAATATATTAGTCTATGCCAATATCAGGTTGCTGAATGACGCGATCGACCAATTACAATAACGTATTCAGAGCGCgttgtaataaaatgtacataaaaataacgTGTGTGTGAAACgttgaaataaagaataaacaATTACTTTAATGCAAGCAACGAAATCTCACCGCATGGTCAATTTGAAACgtgaaatatttcacatttatttcacCTTTGCCCAGATTTAAggaagagttcacccaaaaatgtatttattcacccttcgagtagttccaaatctgtatgaatttctttgttctgccgaacacaaaggaagatattttgaagaaagtttgtcacca

Function

symbol description
creb3l3a Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within endoplasmic reticulum unfolded protein response and positive regulation of transcription by RNA polymerase II. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in nucleus. Is expressed in digestive system; intestinal bulb; liver; and yolk syncytial layer. Orthologous to human CREB3L3 (cAMP responsive element binding protein 3 like 3).

NR:

description
PREDICTED: cyclic AMP-responsive element-binding protein 3-like protein 3-B

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0005634 nucleus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09048 CREB3; cyclic AMP-responsive element-binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223289.1 True 2428 mRNA 0.46 10 10696357 10702574

Neighbor

gene id symbol gene type direction distance location
rxfp3.2b rxfp3.2b,LOC107729713,LOC107719591,LOC107675915,LOC107586455,LOC107596869,LOC107655214,LOC108435892 coding downstream 3579 10689006 ~ 10692778 (-)
zgc:165603 celf5a,LOC107719642,LOC107655216 coding downstream 45405 10626786 ~ 10650952 (-)
LOC122328192 NA coding downstream 300188 10394012 ~ 10396169 (-)
atp5f1d atp5d,LOC107728581,LOC107719603,LOC107554819,LOC107569937 coding downstream 508770 10183038 ~ 10187587 (-)
midn LOC107554818,LOC107728568,LOC107687715,LOC107655225,LOC107719606 coding downstream 523040 10151462 ~ 10173317 (-)
btbd2a btbd2,btbd2a,LOC107719589,LOC107675907,LOC107586379,LOC107655211,LOC108435919 coding upstream 7996 10710570 ~ 10715160 (-)
si:dkey-110c1.10 si:dkey-110c1.10,LOC107719586,LOC107586382,LOC107729664 coding upstream 57798 10760372 ~ 10776235 (-)
mbd3b mbd3b,LOC107676983,LOC107586384,LOC107719585,LOC107655167,LOC107729711 coding upstream 73900 10776474 ~ 10783278 (-)
tcf3b tcf3,LOC107596874,LOC107676964,LOC107719584 coding upstream 82304 10784878 ~ 10806576 (-)
zbtb7a LOC107729681,LOC107586386,LOC107719583 coding upstream 113539 10816113 ~ 10834215 (-)
G151572 NA non-coding downstream 240726 10455371 ~ 10455631 (-)
G151569 NA non-coding downstream 253619 10442487 ~ 10442738 (-)
G151508 NA non-coding downstream 320397 10375641 ~ 10375960 (-)
G151507 NA non-coding downstream 320742 10375173 ~ 10375615 (-)
G151457 NA non-coding downstream 446515 10244918 ~ 10249842 (-)
G151612 NA non-coding upstream 6628 10709202 ~ 10709750 (-)
G151616 NA non-coding upstream 12851 10715425 ~ 10715957 (-)
G151668 NA non-coding upstream 81064 10783638 ~ 10784242 (-)
G151702 NA non-coding upstream 228308 10930882 ~ 10932509 (-)
G151704 NA non-coding upstream 230420 10932994 ~ 10933421 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other downstream 274003 10419127 ~ 10422354 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other downstream 374694 10282022 ~ 10321663 (-)
G151425 NA other downstream 713210 9957811 ~ 9983147 (-)
gpx4a gpx4a,LOC108429535 other downstream 1193351 9498669 ~ 9503006 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other downstream 1524426 9013548 ~ 9171931 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other upstream 232478 10935052 ~ 10994952 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other upstream 471569 11174143 ~ 11188692 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other upstream 527400 11229974 ~ 11231249 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other upstream 763278 11465852 ~ 11490654 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other upstream 1090999 11793573 ~ 11804698 (-)

Expression


Co-expression Network