LOC122327726 (LOC107719667,LOC107699403,LOC107593325,LOC107676991,LOC107717979,LOC107586464,LOC100332608,LOC108270593)


Basic Information

Item Value
gene id LOC122327726
gene name LOC107719667,LOC107699403,LOC107593325,LOC107676991,LOC107717979,LOC107586464,LOC100332608,LOC108270593
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 11567017 ~ 11571678 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223291.1
ACTTCAGCCTTTACTGTCTGATTGGAGGCTGTTGCTATCGCTAAAGCTAATAAGACAAACAGCGGCGGGCAATAACAATTAATCAATGGCGGAAATTGAACGATCAACTTACGTGAACACTTCAGATTCAGAAAATAATTGGTAGAATGCATTTCGAAATAACTTTAATTCAAAGAATAACGTGGACTTATTTTTacgtgtatttttttatcaattagcACCGGCTATTTTGTGAAGATCGgcgttttattaattatataggCAATTATCGATGACTGCAACTCGCAAAGTGCATCTTTAACTACGTTATCGCAACCAAACGCCGAACCTTGTCCGTTCGTCGCGAGTCGGATAATTCTTCAAAGGCTCACGTTTACgcgtttttgattcactaaaaagaaccgagTCATAAGAGTCATTCGTTCGAACATGTCGCCTTGTGTGTCTTTGCCTCACCGTAAAGAATTAGGTTTGAAAAGTGGTACGTTAACTTTGAAAACGTGTGCACTTAAAAGGGAGCGCGCGAAAAATCATTCTGGAAGTTCTGAAAAACActggttgtttatttttagatactAAAAAGACATCCCCTTAACGATATTTGAAACCGCAGTCTTGATTTAAACGGGCGCTCCtcaagtgtgtgttttaaaccCGCCATTCGGTCTTGATTGTTTAAAGTGCTCGGTTTCCAGGAATCGATACGAGTCTAATCGGAAGAGCGTCGTTTCCTCTGATTGGCTCGTCCAGGCGCGCGCGTCTGCAGTGGGACTATATAAGCGCAACAGGCGACCTGCGGATCCGAACCTCTCTCACCGCAGCCTGGGAAaagacagcacacacacacacatacacacacacactaatgaacGCCGAAGTGCCTCTGAAACTGAACACTGTGTGAGGATTCGCAAAGAAGAGGAAAACCGTTTGCAAATCCAGCATCACCCAGCGGCTTCAGCCCAGAGGGATCATGTGGGTTCTGGAGAAGATCCGGGACTCAGTCGAAACAAATGTGCTCCGCCAAGGAGAGGCGGGTGACAAGGGGAAGGCGCCTGTCTATAGCAACGTCCTCACACCCGACAAGATTCCAGATTTCTTCATCCCCCCTAAGCTGGTAAGCTGCCCACCAGAGACCGACGCTTCTGACGTCAAGTCCAAAGAAAGTCTGAAACCCTCGACCTCGGAGCAAACCATCAGCAACAAGAAGATCAGCAGCCCTCGTAGCCCGCGACTGGTCAGCAAGTTGGCAGGAGACACCAAGAACCTGCTCAGGGCGGCTAACCGCCACATCATTCAGATCGAGAGCGCCGACGAAGTCGTGGCGGGTGACACCAACGCCGACCCTCAATCCCAGACCGCCATGTCGCTTCCTTACATCCCAAAGACTCAGACTTCTTACGGATTTGCCACGTTGATGGAGAGTCCCCACACCCGGCGGAAAGAGTCCCTGTTCCACTGCGACCACACCAGTCCGGTCACGTCACCCAATACCCAACGCAAGTCCCAAGGCAAGAGCAGCAACGAAGGGAATCACCTCAACCCTCCGGACTTCAGCAGCTCTCACATAAACCCCTACCGGTACTTCAGCGGTGGCGAGAGCGACACCTGCTCCTCGGCAGAGTCGTCCCCGTTCAGTTCGCCGCTGCTCTCTCGCTCCGCCTCTTTACTGAAGATCTTTACCCACGAGACACAGGCCAAGGTCGCCAAAGGTAAGCGGACATTTGCCAGGCACAGTTCCTTATCCACAGACGAGTGCAGCTCAGCGGAGCCCAGTCCTAACGTTTCTAGACGGAGCCATTGTTCCTCTTTGCAAGGTGGCGGAGCTCTGGACCACCTTCACGGAGCGGACCGCCAACAAAAAGAGCACACCATCAACATGCACAAAGGAGGCACCGTCCGGCTTTGCGCAGACTACGACGGAGGTACGGCCCGCCTGCGAATCCGCATTATGGCGGCCGAGGACCTGTATGATCCCGTGTTTGACATTAAGAGCATCAACTGTTGCGTGTCGCTCTACCTCAATCCGGGCAAGCTGCAGAAGCAGAGGAGCACGATAATCAAGAACAGCCGCAATCCCGTCTTCAACGAGGACTTCTTTTTTGATTCGGTGACTTCGGCTCAGGTTAAGAACCTAGCTTTGAAGATCAAGGTTGTGAATAAAGGCACTAGCCTGAAACGAGACATGCTGTTAGGTGAACGGGAGGTCGCTTTGTGCAAGCTCTTGTCTGGATTTTAGGCCCATCAGAATGGGACGCTGTCTTCAGAGGTGGAATAAGTGCTAGATATTTGCTTTCGTTGTCTTTCATGTAGCGGTGGTTAATTTAGCATTTACAGATTCAGTAGCAACAACCACCACCTGCTCCGGATCGAGGTGTCAGCATAGCTTTAAATTAGTTGCCCGTAAATATAGAGTCTATGACAAAGTCTTTTTGTATGTTGCCGTATTTTGGTTGTTCTACGCGTTTAGCCTAATTAAGACCAAGCGTTTACCTTTTTGATTGTAAAGACTTCTTTCCAGAGCCGCAGTCCTTTGAAGCTTCACAATGGCCCTCTGTGCTAATGTTAGCTTTGATCCGGGACGCGTCTGCTGGCTAATTTGGAGGACAAATAAGCAGACTGAACAATGTTGCGTCACACTGCATGTGTCGGAGTCAGACTTTGGCGTAAACTTGTAAATGCGATGACGTATTCTTGCAAATGTGCAGAATGTCATTTGGTGAAACCCAGAAGCCTTACTAAAGATCGTTTATCGTtttggttggtttttttttgtcttttatttaaatttttttgcatgtttagaTTTGCTCAGATTAGATCATTTTTAGACTGAGCATTGTTATCTGTATCTGTTTGCTGGATATCATTGTATGAAATGAGGGTTCTGGCTTGGACTCTTCGTCAAAAGCCTTTTAAGAAACAGGGTCTTTGAAAGTCTTTCCATGCACACTACTTACACAGAGCAAAGTAACGAGTAAATATCTACTCATGAGATCTAAATTTCAATCCTGTAACCAAAAATGTAATGGTAAAATTCAAATGCTAAAATGTAGTAGAATTATGTGGAAAGGATCTGGATATGATTATCTGTCATTATGCAAATGGTGGGTCTGATGTGCAATTTGCGTTTTCAACAGACAGAAACCATATGAATTGAAAAGTGGTTGAAATTGAACATGAATGGCCGGATGCATGGATCTTTCTTTTCTGGCCtgatgtatttgttatttttttctgattacgCAATCCAAAATAGCTATTCAATTATTGGAAAGACTGTCTAGCCTCCTTttgatttatataaaagtatatcaATTTAGTAAGCGTTTATTTCCCTTCTGGCTGCGCTTTATAGATAAAGAGCATTTTTGAGGTAATGAGGCAGCTAGTActcattaaaatgctaaaaaaaca

Function

NR:

description
PREDICTED: C2 calcium-dependent domain-containing protein 4C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223291.1 True 3417 mRNA 0.46 2 11567017 11571678

Neighbor

gene id symbol gene type direction distance location
tle5 aes,LOC107586404,LOC107593322,LOC107699415,LOC108430095,LOC108271216 coding downstream 101942 11440216 ~ 11465075 (-)
tle2b si:dkey-42p8.3,LOC107719559,LOC107676970,LOC107699414,LOC108271164,LOC108430094 coding downstream 140936 11382193 ~ 11426081 (-)
trnaq-uug_21 NA coding downstream 218566 11348380 ~ 11348451 (-)
s1pr3a s1pr3a,LOC107676952,LOC107719654,LOC107729679,LOC107593356,LOC107699398,LOC107586462 coding downstream 261830 11301565 ~ 11305187 (-)
ankrd24 ankrd24,LOC107729675,LOC107719567 coding downstream 300862 11249988 ~ 11266155 (-)
LOC122327288 capn2b,LOC107565172,LOC107659328,LOC107722663,LOC107655378,LOC107755344 coding upstream 233137 11804815 ~ 11815578 (-)
LOC122327836 NA coding upstream 274188 11845866 ~ 11855677 (-)
LOC122327835 NA coding upstream 291117 11862795 ~ 11870285 (-)
rgs2 LOC107741538,LOC107564933,LOC107664962,LOC107560697,LOC107735525 coding upstream 458784 12030462 ~ 12032362 (-)
si:ch211-117l17.5 LOC107655356,LOC107715708,LOC107741540,LOC107564934,LOC107664973 coding upstream 468598 12040276 ~ 12043067 (-)
G151904 NA non-coding downstream 16147 11550198 ~ 11550870 (-)
G151896 NA non-coding downstream 36407 11528098 ~ 11530610 (-)
G151893 NA non-coding downstream 43595 11522030 ~ 11523422 (-)
G151889 NA non-coding downstream 48876 11509400 ~ 11518141 (-)
LOC122327760 NA non-coding downstream 74057 11490673 ~ 11492960 (-)
G151919 NA non-coding upstream 15983 11587661 ~ 11589923 (-)
G152223 NA non-coding upstream 421035 11992713 ~ 11993033 (-)
LOC122327268 NA non-coding upstream 421445 11993123 ~ 11997045 (-)
G152234 NA non-coding upstream 454434 12026112 ~ 12026795 (-)
LOC122327264 NA non-coding upstream 505063 12076741 ~ 12080117 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other downstream 76363 11465852 ~ 11490654 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other downstream 335768 11229974 ~ 11231249 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other downstream 378325 11174143 ~ 11188692 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other downstream 572065 10935052 ~ 10994952 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other downstream 1144663 10419127 ~ 10422354 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other upstream 221895 11793573 ~ 11804698 (-)
LOC122327182 NA other upstream 269910 11841588 ~ 11845142 (-)
si:ch211-117l17.6 LOC107655409,LOC107715709,LOC107560696 other upstream 473791 12045469 ~ 12049538 (-)
G152276 wdr47,wdr47b,LOC107741541,LOC107664763,LOC107564929,LOC107715726,LOC107655405 other upstream 571164 12142842 ~ 12145575 (-)
polr3f polr3f,LOC107655353,LOC107715715 other upstream 786005 12357683 ~ 12363395 (-)

Expression


Co-expression Network