tmem59l (tmem59l,LOC107719570,LOC107676980,LOC107729706,LOC107699406,LOC108439280)


Basic Information

Item Value
gene id tmem59l
gene name tmem59l,LOC107719570,LOC107676980,LOC107729706,LOC107699406,LOC108439280
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 11162617 ~ 11175995 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223317.1
CGCGCAGCGCGCGCGTGCGTGATGATGTGAGGAGTGACGACACGGCGCATCAAAGGCACGAGGCTGACAGAGCCGATCCGAAGCAGCTACGGCAGGGACCGGTCGAGACGCACCGAACCCCGCAGACGCGCCAGTGCACCGAATCTTGCGGAAAAAAGATGATCCAGTTCGGCGGCAGGGTGCGCGGCGTTCCCGCGCTCGTCTCTCTGATTCTGGTGGCGCTGGCGGCGGCATCATCTGATCTGTTTGACAACCAACTGGGCGATATCAATTACTGCAAAAAGCAATGCCAGATGTCCATCAAAAACAAAAGCCCCGCCAAAGACTCCATCATGAATGCCTGTCACCGCGGCTGCAGGCTCTACTCCATCTGCCAGTTTGTGAATGGAAATACAGGCATCAACACCAGCAAGGAAGAGTGCCAGGGAGcatgCCAGGAGGCCTACAGTAaactgctggagcaggaggcgTGCAGCACAGGGTGTGCCAGCCAACCCGCTGAGCCGGAGATCAAACGGAGGAAGCTCAAGGCCCTGACCAACCGGCCCAAGCCCATCTCTGTCATGGATGCTGTGTCTAGCTGGTGCAATGACATCGTCAGCTCCGCCCAGAGCTTCATTTCTTCCACCTGGACTTTCTACCTGCAGGCTGATGATGGGAAGGTTGTTGTGTTTCAGAGCCAGCCAGAGATTGAGTACTCCTTGCCTGAGTTACAAGCCCCACGCTCCAACGTGGTCGACAAACCCTGGCCTCAAGTCAACTCCCACACACAGCGGCCACATACTGGTGGGCGCTCGCATGGGGAGAGGAATGCGGCAAAACCTGGGGCGAAAGCAAAGCATGTCAGCCAACATGCCGAGGACCCAGCTGCTGAGCACGACTTCCTGGGCTGCATGTCAAGGCGCTCAGGGCTGCCGCGCTGGATCTTAGCAGcttgtctctttctgtctatcaTGGTGATGCTGTGGCTGAGCTGTGCCAGTCTGGTCACAGCACCCGAGCAGCACGTCAAGACTCAGCTTAGCATCAACGGAGATAAAGAGTACATGGATGACTCCCTGAAGGTCAACCCCTATCACTTGACGCCAGTGATCGCAATGACAATCGACCAATCGGAGGAGAGCAAAGAGGCGGGGCCACTTCCGGTCAAGGTTGACCTCAGCAAAACGTCCCTGTAAAAGCACTGAAGAGGTCGACACTTTTGACGACTAGGGTTCAACTCATCTCCAGAGCTATTTCTCGCAATTTAAAGGGGAAGTTACATCgtttttctatataaaaaacaaaagcaaaacatgcatgatgacatttattatatggGTTACGACGTACGTCCTGTCTGAATACTAGTCTCCTCACTGAATTCGCAAATCCTCATGGAACTGTAGTATAGGCGCTTGTTCACATAATGTACTAACGCATTTTTGACTGTAACGTATACACACACTAGAGCTCATGAACAACTTCGCAACACGTTTCTTATCGCTGTCGTGATGCGAATTCCTAAAAAACGCACCGCGCAAACGCAGGGAATCGGACGGCAGACTGGGCCAGACCCTCAAAAGAAGAGCAGGGGTTATTTGTCGAGCTTCGGGCGTTTAGACACCACGGGCGAACGTTCAGTTTCGCGGTGAACGCTTTCCAAGCGCCCCTCCCCGTTATCAATTAGCGTCGCGTTCGAACCGGAAGACGAGCTTTGAAGGTAATCTGCCGCGCTCGTGGATTCTCGCTTTGATGCGAAAGACGAGCAACGGGGGGAAAATCAAACGCGGCCAATTAGCGAAAGATGCGCTTTCGTAACAACGTTTACAAAACATGAATGCGTCCTTTGAACTGATATGTAATCGCACTGACAAGGACTCTTAATTACTTTACCAAATGTGAATGTCAGTAGTTTGAAGAGTTAAATTAGGATTTTGTTCAATTGTATAGTTCGATTTAAAAAGAACCGTCTTTATAGGCTTTAGGACGTTTTGTATGCAAGCAGGTATTGAGGGCGTTTTTTCATAAGCATAATTATGCATCCATAATAAGCCCGACTAAACTACTCGCATTCACGTGAAGGAAGCAtggtgtgtatttatttatttatgtatttattcgaAGCTTAGGCCTGTAGTCTTTCATCTCTCATTTAGCTCCTTAGATTTTATGAAGCGTAACTGTAAATTTATTCCCAACGTAAACCGTTACAGACAGGAAAAGGCGCTTGCTGTTCAGACCGAATGTGAAGTGTTGCATTATTCCCAAGCCTTTCCACCTACATTCTTCACCTCTGCCCAAAAAAAAGCGATGGGGTGGAGTCGGGTCGGGTTTTGAACGCCTAGCACCAAGCTTTGACAAATATCTTTTGTAACCAGACTGTAGAACCGACAGGCTTTCATGGCACTATTTGTCTTGTGCTGCTATTTTTCCCCATTTAGGCCCAGCCACAGTGCATGCTAGTACGCTACGAGACGTTGAATATATCGTCCCGTCTATTTTGGAAGCAAACTGCTGTACGCTCGTgatctttgtgtttttgcttaATGTTCAGTAGGCACTGTAATTATGACCATAGATTACTAAGAAGTGAAGCGGTGGGATACCTTAATAAGCCATTTAATATCTACTGGTTCATCGTTACTGTATGAAATACAAGTCAATAAtatcttttttgcttttctttttttgaacagTTTCCCATAAGGTACTCCATAATATCAGACGAATAAAGTGTTTTCATGTTGTAA

Function

symbol description
tmem59l Acts upstream of or within axon extension. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Is expressed in nervous system; neural tube; and trigeminal placode. Orthologous to human TMEM59L (transmembrane protein 59 like).

NR:

description
transmembrane protein 59-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223317.1 True 2732 mRNA 0.48 8 11162617 11175995

Neighbor

gene id symbol gene type direction distance location
ssbp4 ssbp4,LOC107719571,LOC107676978,LOC107729707 coding downstream 33947 11077596 ~ 11128670 (-)
fkbp8 fkbp8,LOC107676977,LOC107719572,LOC107699404,LOC107729668,LOC107586436 coding downstream 86964 11062765 ~ 11075653 (-)
ell ell,LOC107729685,LOC107719573,LOC107655162,LOC107586435 coding downstream 101546 11031722 ~ 11061071 (-)
dot1l dot1l,LOC107719574,LOC107655195,LOC107586394,LOC107729667 coding downstream 134504 11003059 ~ 11028113 (-)
amh LOC107729672,LOC107676960,LOC107593309 coding downstream 161631 10997306 ~ 11000986 (-)
ankrd24 ankrd24,LOC107729675,LOC107719567 coding upstream 73993 11249988 ~ 11266155 (-)
s1pr3a s1pr3a,LOC107676952,LOC107719654,LOC107729679,LOC107593356,LOC107699398,LOC107586462 coding upstream 125570 11301565 ~ 11305187 (-)
trnaq-uug_21 NA coding upstream 172385 11348380 ~ 11348451 (-)
tle2b si:dkey-42p8.3,LOC107719559,LOC107676970,LOC107699414,LOC108271164,LOC108430094 coding upstream 206198 11382193 ~ 11426081 (-)
tle5 aes,LOC107586404,LOC107593322,LOC107699415,LOC108430095,LOC108271216 coding upstream 264221 11440216 ~ 11465075 (-)
LOC122327759 NA non-coding downstream 2888 11155787 ~ 11159729 (-)
G151762 NA non-coding downstream 116390 11043997 ~ 11046227 (-)
G151704 NA non-coding downstream 229196 10932994 ~ 10933421 (-)
G151702 NA non-coding downstream 230108 10930882 ~ 10932509 (-)
G151668 NA non-coding downstream 378375 10783638 ~ 10784242 (-)
G151774 crlf1b,LOC107676985,LOC107729674,LOC107719637,LOC107577518 non-coding upstream 568 11176563 ~ 11179432 (-)
G151775 NA non-coding upstream 3927 11179922 ~ 11180390 (-)
G151773 NA non-coding upstream 8235 11184230 ~ 11185919 (-)
G151858 NA non-coding upstream 121230 11297225 ~ 11297463 (-)
G151870 NA non-coding upstream 196134 11372129 ~ 11378059 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other downstream 167665 10935052 ~ 10994952 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other downstream 740263 10419127 ~ 10422354 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other downstream 840954 10282022 ~ 10321663 (-)
G151425 NA other downstream 1179470 9957811 ~ 9983147 (-)
gpx4a gpx4a,LOC108429535 other downstream 1659611 9498669 ~ 9503006 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other upstream 53979 11229974 ~ 11231249 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other upstream 289857 11465852 ~ 11490654 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other upstream 617578 11793573 ~ 11804698 (-)
LOC122327182 NA other upstream 665593 11841588 ~ 11845142 (-)
si:ch211-117l17.6 LOC107655409,LOC107715709,LOC107560696 other upstream 869474 12045469 ~ 12049538 (-)

Expression


Co-expression Network