amh (LOC107729672,LOC107676960,LOC107593309)


Basic Information

Item Value
gene id amh
gene name LOC107729672,LOC107676960,LOC107593309
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10997306 ~ 11000986 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223343.1
CTGTTGACCCACCCTAAAACAAGTGCTGGATTTCTCTGCGATTGTGTGAGAGAAGATGCTTTTCCGTGCAAGATTTTGGCTGGTGCTGTTGCTGACTGTGGCGATTTGGTCATATGGTACCAGTGTAGGACACAAAGAGCAGGATAGCAGCCAGAAGGTCACCCAACAATCAGGATGGAACGGAGATGAGCAGGAAGTTACAGATATGGTACGCATACCCCGCAGCGCCAGTGAACAGCCGATTGCTCCATCCTCTGTGGACGTGCCGTGTGATGAAGAGCAACTAGCTCGCAGTCTTGCCATGGATGACTTCCTGTCAGCGTTGAGCAGAGAGAGCGAATTCGAGAGTATGGAATCCCAGCGGTTTGGAATATGTTCCCCTGGAAGTTCAAGTCTGCAGATTTCACGGCTAGTACAGAGTTTGCAAAAACGAAGTAGTCTCAAGGGTGTACATTCCACAAAAGatatTTGGGATGCTGAAAAGGAAGGAGAGATGACTTTAACCCTCACATTCCCAAGAGATGCTCAACCGACCAGCCCAGCCTCTGTGATGCTCCTGTTCAGTGTCGATTCCATTAAAGGAGATGGTCTGAGAGTGAAATTCAACAGTCATTCCATCCATCCAAGTACACAGACCGTTTGCATTTCTGAGGTTACACGTTTCCTGGTTCTTACAGCAGGACAAAGTCATGCCCATGTTCACCTTAAACTAAGTGTAGCAATTGAGACATGGAAAGAGACGAAACCCAGTGTATCTGAGCTTCGGGACTTGTTGATGAAAAAGGTAGACAACAGCAATGTGTCAATGAGGCCGATCTTACTTTTCCTCTCTGACCGTGATGAGCAAAGGACACCGCACTTAAAATATCACGGaaatccaCTGGATGAGGAACTCCCTTCCAGAACTTATCTTTTCCTCTGTGAGCTGCAGAAGTTCTTGAGCGATGTCCTTCCTCAGAAAGAGGGACCGACCTCTCAGGAAGCTGCAAACAGTATCTATTTGGATGCGCTGCATTCTCTTCCACCTCTCAGCCTTGGAGTGTCATCCACAGAGTCTCTACTGTCAGGACTGGTCAATTCCTCCACGCCGACTGTATTTGTCTTCCCTGAGAGACAGCGAGGCCTGCAGAATCACAGAGTGGAGGTGACTCTAGATTCTCCTTTGCTGTCTGTGCTCAGAACGAGACTGGATGAAGCAACGGCTCAGGTGAAACAGCAGGAGGTGGGGCAAAAGGTGACTGACAGGCTTCAGAAACTGAGTAAACTAAGTGGCCTTTCTCCAGAAGTAGAGGACGATGAAGCAGTGGCTAAGGAACATAAACGGGCCCAGTACCGGTCCATTTTGCTGCTGAAGGCCCTGCAGATGGTACTCAGTACCTGGGAGGTGGAAAGAGCTCAGAGAGCAGCCAGAGCGGATGAAGATGGCCCAACGCTGCCCAGTCAGTGTCGGCTTCAGAGCTTGTCAGTGTCCTTGAGGAAGTTCTTACTTGAGCCTTCAAAAGTCAACATCAACAACTGTGAGGGAGAGTGTAGATTCCCTCTGACCAGAGGCAACAACCACGCCATCCTCCTGAACAGCCACATTCAGAGTGGCCAGCCCGTCAACCGCTCTCTCTGCTGCGTCCCGGTGGAGTTTGATGACCTGTGTGTGATCGAGCTGGAGAGCGAGGGCACCAACATCTCCTTCAAGACCAACGTGGTAGCGACCAAGTGCGAATGTCGCTGACGCTCCCTCCTTTTGTTCTTTGAAATGAGCTCATGAGTGCGCATTTAGCAACATATGGATAAAACCTGAtacatctgcatttatttttgcttgtaaacaCACAAAGTTCTAGGTTTTCTCAAACTGACCTGCTACATATGCAAACATgcaacataaaatgtcatttaatgtgTAAATTAGGTAATTATGGGGAAATTTAGCATATTCAGTGATATAAACAATTTTAGACCACTTTAGCTGTATGACATAATTAGCTGTCTTATTAACATGGATTTGCATCAGTGCTAaacgcattaaaatatttggctgcattagaataaaaaatattttaaaaagca

Function

NR:

description
PREDICTED: muellerian-inhibiting factor-like isoform X2

GO: NA

KEGG:

id description
K04665 AMH; anti-mullerian hormone

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223343.1 True 2064 mRNA 0.47 7 10997306 11000986

Neighbor

gene id symbol gene type direction distance location
org LOC107729678,LOC107655182,LOC107719657,LOC107676951,LOC107586460 coding downstream 13318 10981892 ~ 10983988 (-)
lingo3a LOC107719577,LOC107655199,LOC107596880,LOC107729688,LOC107676981,LOC107586392 coding downstream 34963 10937626 ~ 10962343 (-)
atp8b3 atp8b3,LOC107676946 coding downstream 90285 10892097 ~ 10907021 (-)
pias4a pias4a,LOC107586389,LOC107655204,LOC107596878,LOC107676972 coding downstream 145127 10843805 ~ 10852179 (-)
map2k2a map2k2a,LOC107586388,LOC107729695,LOC107655207,LOC107596877,LOC108430106 coding downstream 153930 10835672 ~ 10843376 (-)
dot1l dot1l,LOC107719574,LOC107655195,LOC107586394,LOC107729667 coding upstream 2073 11003059 ~ 11028113 (-)
ell ell,LOC107729685,LOC107719573,LOC107655162,LOC107586435 coding upstream 30736 11031722 ~ 11061071 (-)
fkbp8 fkbp8,LOC107676977,LOC107719572,LOC107699404,LOC107729668,LOC107586436 coding upstream 61779 11062765 ~ 11075653 (-)
ssbp4 ssbp4,LOC107719571,LOC107676978,LOC107729707 coding upstream 76610 11077596 ~ 11128670 (-)
tmem59l tmem59l,LOC107719570,LOC107676980,LOC107729706,LOC107699406,LOC108439280 coding upstream 161631 11162617 ~ 11175995 (-)
G151704 NA non-coding downstream 63885 10932994 ~ 10933421 (-)
G151702 NA non-coding downstream 64797 10930882 ~ 10932509 (-)
G151668 NA non-coding downstream 213064 10783638 ~ 10784242 (-)
G151616 NA non-coding downstream 281349 10715425 ~ 10715957 (-)
G151612 NA non-coding downstream 287556 10709202 ~ 10709750 (-)
G151762 NA non-coding upstream 43011 11043997 ~ 11046227 (-)
LOC122327759 NA non-coding upstream 154801 11155787 ~ 11159729 (-)
G151774 crlf1b,LOC107676985,LOC107729674,LOC107719637,LOC107577518 non-coding upstream 175577 11176563 ~ 11179432 (-)
G151775 NA non-coding upstream 178936 11179922 ~ 11180390 (-)
G151773 NA non-coding upstream 183244 11184230 ~ 11185919 (-)
oaz1a oaz1a,oaz1s,oaz1,LOC107719576,LOC107655198,LOC107586434 other downstream 2354 10935052 ~ 10994952 (-)
micos13 si:dkey-78l4.14,LOC107596903,LOC107719663,LOC107586453,LOC107675912,LOC107655188 other downstream 574952 10419127 ~ 10422354 (-)
polrmt LOC107687709,LOC107728563,LOC107569934,LOC107655172,LOC107719647,LOC107569035,LOC101483880 other downstream 675643 10282022 ~ 10321663 (-)
G151425 NA other downstream 1014159 9957811 ~ 9983147 (-)
gpx4a gpx4a,LOC108429535 other downstream 1494300 9498669 ~ 9503006 (-)
rex1bd si:ch211-87h14.3,clg08h19orf60,cssa23h19orf60,LOC107676986,LOC107729673,LOC107593355,LOC107719569,LOC108439285,LOC103025814 other upstream 173157 11174143 ~ 11188692 (-)
cks2 cks2,LOC107699408,LOC107593315,LOC107729701,LOC103026129,LOC108230759,LOC105927846,LOC106584418 other upstream 228988 11229974 ~ 11231249 (-)
gna11a LOC107717982,LOC107676956,LOC107586405,LOC107699416,LOC107719558 other upstream 464866 11465852 ~ 11490654 (-)
LOC122327290 LOC107655377,LOC107755342,LOC107565170,LOC107659327 other upstream 792587 11793573 ~ 11804698 (-)
LOC122327182 NA other upstream 840602 11841588 ~ 11845142 (-)

Expression


Co-expression Network