Item | Value |
---|---|
gene id | tal1 |
gene name | tal1,LOC107669848 |
gene type | coding |
species | tiger barb (Puntius tetrazona) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_056720.1 |
NCBI id | CM032089.1 |
chromosome length | 18002998 |
location | 8880269 ~ 8886428 (+) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
symbol | description |
---|---|
tal1 | Enables sequence-specific DNA binding activity. Involved in definitive hemopoiesis; endocardium formation; and myeloid cell differentiation. Acts upstream of or within several processes, including animal organ development; circulatory system development; and positive regulation of endothelial cell differentiation. Predicted to be located in nucleus. Is expressed in several structures, including cardiovascular system; hematopoietic cell; hematopoietic system; mesoderm; and nervous system. Human ortholog(s) of this gene implicated in acute lymphoblastic leukemia. Orthologous to human TAL1 (TAL bHLH transcription factor 1, erythroid differentiation factor). |
description |
---|
PREDICTED: T-cell acute lymphocytic leukemia protein 1 isoform X1 |
id | name | namespace |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0048823 | nucleate erythrocyte development | biological_process |
GO:0035050 | embryonic heart tube development | biological_process |
GO:0001525 | angiogenesis | biological_process |
GO:0048844 | artery morphogenesis | biological_process |
GO:0060214 | endocardium formation | biological_process |
GO:0060216 | definitive hemopoiesis | biological_process |
GO:0060217 | hemangioblast cell differentiation | biological_process |
GO:0060218 | hematopoietic stem cell differentiation | biological_process |
GO:0001570 | vasculogenesis | biological_process |
GO:0045603 | positive regulation of endothelial cell differentiation | biological_process |
GO:0003007 | heart morphogenesis | biological_process |
GO:0048368 | lateral mesoderm development | biological_process |
GO:0030878 | thyroid gland development | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0003677 | DNA binding | molecular_function |
GO:0046983 | protein dimerization activity | molecular_function |
id | description |
---|---|
K09068 | TAL; T-cell acute lymphocytic leukemia protein |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_043223369.1 | False | 2548 | mRNA | 0.51 | 4 | 8880298 | 8886428 |
XM_043223370.1 | True | 2551 | mRNA | 0.51 | 4 | 8880300 | 8886428 |
XM_043223371.1 | False | 2486 | mRNA | 0.51 | 4 | 8880269 | 8886428 |
XM_043223373.1 | False | 2514 | mRNA | 0.51 | 4 | 8880302 | 8886428 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
ier5 | ier5,LOC107731541 | coding | upstream | 20200 | 8858464 ~ 8860069 (+) |
si:dkey-121a11.3 | si:dkey-121a11.3,LOC107669817,LOC107731537,LOC107715110,LOC107653549 | coding | upstream | 33213 | 8828910 ~ 8847056 (+) |
LOC122327627 | LOC107653644,LOC107715111,LOC107588053,LOC100711005,LOC102215641,LOC101481666 | coding | upstream | 60675 | 8813432 ~ 8819594 (+) |
ankrd29 | ankrd29,LOC107669827,LOC107653646,LOC107731532,LOC107715109 | coding | upstream | 67403 | 8807166 ~ 8812866 (+) |
osbpl1a | LOC107592705,LOC107757490,LOC107653641,LOC107715107 | coding | upstream | 108050 | 8755638 ~ 8772219 (+) |
tm2d1 | tm2d1,LOC107715116,LOC107653653,LOC107669801,LOC106574044 | coding | downstream | 109543 | 8995971 ~ 9004905 (+) |
frem1b | frem1b,LOC107669836,LOC107599441,LOC107592728,LOC107728586,LOC107715059,LOC107653550 | coding | downstream | 311596 | 9198024 ~ 9223536 (+) |
atpaf1 | atpaf1,LOC107653579,LOC107715059 | coding | downstream | 337382 | 9223810 ~ 9227301 (+) |
rab3b | rab3b,LOC107592692,LOC107653655,LOC107669838,LOC108429523,LOC103027359,LOC108270584,LOC105904424 | coding | downstream | 341980 | 9228408 ~ 9235230 (+) |
nrd1b | nrd1b,LOC107669832,LOC107592727,LOC107728531 | coding | downstream | 349671 | 9236099 ~ 9248034 (+) |
G150928 | stx6,LOC107715114,LOC107669815,LOC107653648,LOC107731540 | non-coding | upstream | 25018 | 8854822 ~ 8855251 (+) |
G150916 | NA | non-coding | upstream | 84983 | 8794161 ~ 8795286 (+) |
G150886 | NA | non-coding | upstream | 106634 | 8772636 ~ 8773635 (+) |
G150860 | NA | non-coding | upstream | 312956 | 8566961 ~ 8567313 (+) |
G150858 | NA | non-coding | upstream | 319096 | 8560402 ~ 8561173 (+) |
G150936 | NA | non-coding | downstream | 6136 | 8892564 ~ 8894757 (+) |
G150937 | NA | non-coding | downstream | 11792 | 8898220 ~ 8898434 (+) |
G150938 | NA | non-coding | downstream | 12618 | 8899046 ~ 8899466 (+) |
G150939 | NA | non-coding | downstream | 13148 | 8899576 ~ 8900972 (+) |
G150941 | patj,inadl,LOC107715056,LOC107731530,LOC107669802 | non-coding | downstream | 16646 | 8903074 ~ 8905934 (+) |
G150862 | s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 | other | upstream | 262664 | 8614289 ~ 8617605 (+) |
G150756 | NA | other | upstream | 711997 | 8167449 ~ 8168272 (+) |
G150369 | NA | other | upstream | 2171378 | 6708488 ~ 6708891 (+) |
ccnt2b | ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 | other | upstream | 2369813 | 6502914 ~ 6510456 (+) |
npb | npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 | other | upstream | 2640912 | 6236117 ~ 6239357 (+) |
pdzk1ip1 | NA | other | downstream | 4194 | 8890622 ~ 8892199 (+) |
G150940 | NA | other | downstream | 14715 | 8901143 ~ 8902311 (+) |
G150945 | NA | other | downstream | 32851 | 8919279 ~ 8919780 (+) |
G150946 | NA | other | downstream | 35270 | 8921698 ~ 8921967 (+) |
G150965 | NA | other | downstream | 101758 | 8988186 ~ 8988691 (+) |