ier5 (ier5,LOC107731541)


Basic Information

Item Value
gene id ier5
gene name ier5,LOC107731541
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8858464 ~ 8860069 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223379.1
TAAAAATAGAAACGGTCTCATTCCTCCCTAGACCATTGTTGAGTGCTGGAGAGAATGCGTGAGGTATTCAGAACTCCTACACTCACCCGATAAcacaaatattgtattttatgaatGAGAATGAGGCTTGTGTCAACAAAATACGGGACGATTTAATCTACGGGAGGAAAAGACCGTTTGGACGTTATTTATTAACGCGTTTCCGCGCCAGTGGCCAATTCGCGGTAGCTGTTTGGGGACGATCCTTAGAGGAAATCAAACGCGGAACGCCCGGCGAACTTTGTGCCTCTGTGAACTTTGCCGCACCGATTCCAGCGATGGAATACAAAGTGGAAGCCCATCGGATTATGAGCATTTCCTTAGGGAAGATCTACAACTCGCGCGTTCAGCGAGGCGGcattaaactgcataaaaacctCTTGGTTTCGCTGGTGCTTCGCAGCGCGCGCCAGGTCTATCTGAGCGACTACTACAGCGGCGCGTGTCTGAACGCGGCTCAGGGCGAGCGCGAATGGGACATCACGGACTCGGAGAGGGAGAAGTTCCCTCCCTCCACAGCGGAGAGCCCGGAGGAGCCCCAGCAGCCCGAGAAAGAGCGGGAGTGTCGCGAAAACGGCGACGAGGTGAAGTCAGACCCGGCGGATTGCACTTCCACTTCGCAACAAGAGCAAAAGCAAAGCCCTTCGCCGGAGCCCGTGGCAAAGGATTCACCCGAAACCCCGCCGGAAGCCAGCAGCGAACCCGAGGGGTGTCCCTCGGGCGTTGCAGTAGCAGAGTGCGGCTCGACGCCCGAAGCGGACGCGGAATCGCGTCAAACGCCCAAAACGCATGTGTGTTCAAACAGGAAAAGGAGCGCGGAGGAGACCGAAAGTGGCGATTCGCCTCAAAAAAGGACCAAAGTCGCTTCCTCGAACGCTAAAGAGGACGACGAAGCCGAGGAGATGGACACGAGTAACGTGTCCAACCTCATTACGATATTCGGTTCCAGTTTCTCAGGACTCCTCAGCAAGGACGGCGCCAAACCCGAGTCCGAAGCCGAGGACAGCGGACAGATCTGCTGCGACCAAATGTTGAAGAACCTGAACCCTTGGAGTACGGCGATAGTAGCTTTCTAACCGCGTCGCGCTGTGCTCATCCGGGTCGAGCTGAGCGCGTTGGTAGCACGTGGTCGGGCCCGACGTCGTCGCGCGGGACTTCCCAGCAAGCGCGAGCGCACAAGCTCGGTTTGGCCTGTGAGATGTCCGGGCATGCCTTTCCCAGCGAAGGAGGTATCTGAATGCCGGTGCTACTACTTGGGATCTACCGCAGTCCTCGGAAGTGTTGAACTCTCAGACATTATGAAGCCATGCGAGCGAGTGGTATTACAACATATGCAAATGTGTCACGAAGGTCAATGTTACATTGTCACCGAACCGATTCAGGGTCGATCGCACCAAACTTGACTGTACGAGGTTCAGGCCACTGTTTTAAcgtctttgttttaaaaagacctgtacattttgtaatattcgagtgtgtatatattgtgcGTCGCATTCTGGATCTATGTATTTTGGTATCATGACGATTTACGTGGTGCTCacgtattaaaaaaatgtgaaacgAC

Function

symbol description
ier5 Orthologous to human IER5 (immediate early response 5).

NR:

description
PREDICTED: immediate early response gene 5 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223379.1 True 1606 mRNA 0.53 1 8858464 8860069

Neighbor

gene id symbol gene type direction distance location
si:dkey-121a11.3 si:dkey-121a11.3,LOC107669817,LOC107731537,LOC107715110,LOC107653549 coding upstream 11408 8828910 ~ 8847056 (+)
LOC122327627 LOC107653644,LOC107715111,LOC107588053,LOC100711005,LOC102215641,LOC101481666 coding upstream 38870 8813432 ~ 8819594 (+)
ankrd29 ankrd29,LOC107669827,LOC107653646,LOC107731532,LOC107715109 coding upstream 45598 8807166 ~ 8812866 (+)
osbpl1a LOC107592705,LOC107757490,LOC107653641,LOC107715107 coding upstream 86245 8755638 ~ 8772219 (+)
lrrc39 lrrc39,LOC107592708,LOC107715106,LOC107653639,LOC107588057 coding upstream 105598 8749524 ~ 8752866 (+)
tal1 tal1,LOC107669848 coding downstream 20200 8880269 ~ 8886428 (+)
tm2d1 tm2d1,LOC107715116,LOC107653653,LOC107669801,LOC106574044 coding downstream 135902 8995971 ~ 9004905 (+)
frem1b frem1b,LOC107669836,LOC107599441,LOC107592728,LOC107728586,LOC107715059,LOC107653550 coding downstream 337955 9198024 ~ 9223536 (+)
atpaf1 atpaf1,LOC107653579,LOC107715059 coding downstream 363741 9223810 ~ 9227301 (+)
rab3b rab3b,LOC107592692,LOC107653655,LOC107669838,LOC108429523,LOC103027359,LOC108270584,LOC105904424 coding downstream 368339 9228408 ~ 9235230 (+)
G150928 stx6,LOC107715114,LOC107669815,LOC107653648,LOC107731540 non-coding upstream 3213 8854822 ~ 8855251 (+)
G150916 NA non-coding upstream 63178 8794161 ~ 8795286 (+)
G150886 NA non-coding upstream 84829 8772636 ~ 8773635 (+)
G150860 NA non-coding upstream 291151 8566961 ~ 8567313 (+)
G150858 NA non-coding upstream 297291 8560402 ~ 8561173 (+)
G150936 NA non-coding downstream 32495 8892564 ~ 8894757 (+)
G150937 NA non-coding downstream 38151 8898220 ~ 8898434 (+)
G150938 NA non-coding downstream 38977 8899046 ~ 8899466 (+)
G150939 NA non-coding downstream 39507 8899576 ~ 8900972 (+)
G150941 patj,inadl,LOC107715056,LOC107731530,LOC107669802 non-coding downstream 43005 8903074 ~ 8905934 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other upstream 240859 8614289 ~ 8617605 (+)
G150756 NA other upstream 690192 8167449 ~ 8168272 (+)
G150369 NA other upstream 2149573 6708488 ~ 6708891 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other upstream 2348008 6502914 ~ 6510456 (+)
npb npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 other upstream 2619107 6236117 ~ 6239357 (+)
pdzk1ip1 NA other downstream 30553 8890622 ~ 8892199 (+)
G150940 NA other downstream 41074 8901143 ~ 8902311 (+)
G150945 NA other downstream 59210 8919279 ~ 8919780 (+)
G150946 NA other downstream 61629 8921698 ~ 8921967 (+)
G150965 NA other downstream 128117 8988186 ~ 8988691 (+)

Expression


Co-expression Network