fam163ab (LOC107728553,LOC107592741,LOC107669804)


Basic Information

Item Value
gene id fam163ab
gene name LOC107728553,LOC107592741,LOC107669804
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 9272754 ~ 9281842 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223505.1
AGCCGTGATGGAGCTCGAGCTACAGCACTAGCAAAAGTGGGGCatgttttcagtttcatttgtACACTCTGCTTCGTGAAACTCCTCGCTAAAACTTCTTCAGCAGCAGCGGACGGCTTCAGATCTCCTCAGCCTCTGACCTTCACAGAGCGAGTCTCCATCATCTGATGCTCAGTCTGCGTCTCTCTCCGCGCAGGGACTAACTCCTCCTTTCGCGCTGTCTCCTGCACTTGCTCCTCAAAGCGAAACATGTAGACCGGCGGGTTTCGGGTCTGGAGGACAAGTTTTTGGTCCCTTTGTGTGGAAGTAATCGGAGGAGAGATGGTATGATCGAGCTCTCGCCTCCGGACCTCTCTCCAAACGGGCTACAGACATTCGCTGAAGagtttGATGGAGATCCGGTCGGATGACAGCGGGAACTGTGGTAATAACCGGAGGAATTCTCGCCGCGGTGATTCTCCTGTGTATCATTGCCGTGCTCTGTTACTGTCGACTTCAGTATTATTGCTGTAAGAAGAATGGATCGGATCCAGACGCTGTTTGCCCACAGCCTCAGTTTGCGTGCCACACGTGCAGCACATCCAGGCTGGACGGGGCCGCTTCGAGCCCGCTCTCCCTGTCCCCGGAGCTCACGCCCCCGCAGAGCTTCTGCCCCACCTGCTCTCCGTTCTACATCAGCACCGCGGGGGAAACGCTCAACGGGGCCGAGCGCATCGCCTACATGCCGTCTCTCACCCTCCCGTCTCTTCACAGCCGGCCGGACCTCTACTCCAACACACGAGCCATAAGCACTGACGTCTGATCAAAGCAGAGCGGACAGACAGTACACTCATCCTATTTGTCTAGCGGGAAACTGTAGTCAATAACCCTATGTAGTGTTTTATATAAACCGAATTTCTGAATTTGTTTGACTCTGATTAACACTGAAAAATTGCATTCATctgcatttttgtcttgttggTACACCTAAGCGTATTTGACACAGGGTAAAAACGCACTTGAG

Function

NR:

description
PREDICTED: protein FAM163A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223505.1 True 1003 mRNA 0.53 3 9272754 9281842

Neighbor

gene id symbol gene type direction distance location
tdrd5 LOC107669834,LOC107728589,LOC107592689,LOC107715068,LOC107653580,LOC107576589 coding upstream 2619 9260762 ~ 9270135 (+)
axdnd1 axdnd1,LOC107669794,LOC107653552,LOC107728533,LOC107578687 coding upstream 15492 9248687 ~ 9257262 (+)
nrd1b nrd1b,LOC107669832,LOC107592727,LOC107728531 coding upstream 24720 9236099 ~ 9248034 (+)
rab3b rab3b,LOC107592692,LOC107653655,LOC107669838,LOC108429523,LOC103027359,LOC108270584,LOC105904424 coding upstream 37524 9228408 ~ 9235230 (+)
atpaf1 atpaf1,LOC107653579,LOC107715059 coding upstream 45453 9223810 ~ 9227301 (+)
rabgap1l rabgap1l,LOC107728556,LOC107715121,LOC106613570,LOC107592725,LOC106574055,LOC107655181,LOC107669795 coding downstream 1944 9283786 ~ 9360315 (+)
gpr52 gpr52,LOC107599442,LOC107715120,LOC107655251,LOC107592687,LOC107728559,LOC107669811 coding downstream 27964 9309806 ~ 9317007 (+)
rab11ba rab11b,LOC107599444,LOC107592688,LOC107655249,LOC108429533,LOC102310619 coding downstream 167447 9449289 ~ 9454347 (+)
hnrnpm hnrnpm,LOC107599446,LOC107728570,LOC107592680 coding downstream 183666 9465508 ~ 9472502 (+)
polr2eb polr2e,polr2eb,LOC107669821,LOC107599482 coding downstream 221708 9503550 ~ 9506291 (+)
G150983 NA non-coding upstream 125366 9145211 ~ 9147388 (+)
LOC122327612 NA non-coding upstream 201582 9068732 ~ 9071172 (+)
G150970 NA non-coding upstream 242844 9025901 ~ 9029910 (+)
G150969 NA non-coding upstream 258902 9013534 ~ 9013852 (+)
G150967 NA non-coding upstream 277271 8995206 ~ 8995483 (+)
G151178 NA non-coding downstream 78586 9360428 ~ 9365322 (+)
G151194 NA non-coding downstream 191144 9472986 ~ 9475031 (+)
G151210 LOC107669820,LOC107592722,LOC107655244,LOC107599472 non-coding downstream 232898 9514740 ~ 9515568 (+)
G151294 NA non-coding downstream 318714 9600556 ~ 9667133 (+)
G151308 NA non-coding downstream 480312 9762154 ~ 9762419 (+)
G150965 NA other upstream 284063 8988186 ~ 8988691 (+)
G150946 NA other upstream 350787 8921698 ~ 8921967 (+)
G150945 NA other upstream 352974 8919279 ~ 8919780 (+)
G150940 NA other upstream 370443 8901143 ~ 8902311 (+)
pdzk1ip1 NA other upstream 380555 8890622 ~ 8892199 (+)
march2 march2,LOC107728591,LOC107669840,LOC107655247,LOC107592682,LOC107599445 other downstream 172996 9454838 ~ 9530165 (+)
G151232 NA other downstream 295837 9577679 ~ 9580151 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other downstream 606321 9888163 ~ 9893507 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other downstream 613599 9895441 ~ 9910793 (+)
LOC122328159 NA other downstream 641705 9923547 ~ 9963634 (+)

Expression


Co-expression Network