ahr2 (ahr2,LOC107751478,LOC107687867,LOC107600952)


Basic Information

Item Value
gene id ahr2
gene name ahr2,LOC107751478,LOC107687867,LOC107600952
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 7058157 ~ 7106640 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223523.1
aaaaaaggaagaagGAAAATTTGCTCAGCTCACGCCATTGCCATTCGCCGTGTAGGATGAAAACTTTCGGAAACTTTTCGTCTTCGTTTTAAGCTGCTTTCGGTGTAAAGAAGCGACGCCGGCGGGAATTACATCTGGACGGGACTTTTCTcctcttgtttgtgtgtgtgcgcgcgcgagGATTTACCCGAATAACGCACGCTTTCGTCGACATTTAAAGGAAATTTAGGGGATTTTACATGCTAGTCATATTTTAAACACTTCTCGGAGACACCAGACGACCATGTCGGGGGGTATCGGTATATATGCGGTCAAGAAACGGAAGAAGCCCGTTcagaaaatACCCAAACCACCACCTCCCGATGGTGTGAAATCCAACCCCTCCAAGCGGCACAGAGACCGGCTGAACAGTGAACTGGACAAGCTGACCAACCTTCTACCCTTCTCAGAAGATGTCAGCGCACGGCTAGACAAACTCTCTGTGCTTCGACTCAGTGTTGGATACCTGAAGGTCAAGAGCTTCTTCAATGctACAGTCAAAAAGACGGGAGGAAATGGATGGATAAACGACCGGTCAGGGACATTCGGAGGAAACGGACAGTCAACGACCAGTCTGGATGGAGTCAGTTTCTCAGAAGGGGAACTGTTGTTGCAgGCACTCAATGGCTTTGTGCTGGTGGTCACCGCCGAAGGTTACGTGTTTTATTCATCTCCAACTATACAGGACTACTTGGGCTTCCATCAGTCGGATGTGGTCCATCAGAGTGTCTTCGAGCTCATCCATACAGATGATAGGGCAATGTTCCGAAGACAATTACACTTCGCTCTCAATCCTACTTCGTGCGATGGTAGCGATAGATCTGAAGCCATTCAAAGCAGCAGTGACATCACCAGAGACATGGTAAACTACAACCCTCAACACATCCCTCCAGAAAACTCGTCCTTCTTGGAACGAAGTTTCTGTTGCCGATTTCGGTGCCTTCTTGACAACTCATCAGGCTTCCTGGCCCTGAACTTCCAGGGGAGGCTGAAATATCTCCATGGACAAAACAAGTTGGCTGAAGATGGGACCTTAGCTCACCCTCAACTGGCTCTTTTTGTCATAGCCACACCCCTCCAGCCACCCTCTATCTTGGAGATCAGGAGCAAGACTCTTCTTTTCCAAACCAAACACAAGCTGGACTTTACACCTATGGGTGTTGACACAAGAGGAAAAGTGGTTCTTGGCTACACTGAGATTGAGCTGTGTATGAGAGGCTCTGGCTATCAGTTCATTCATGCTGCTGACATGATGTACTGTGCTGACAACCATATCAGAATGATAAAGACTGGAGAAAGTGGTTTAACTGTCTTTAGGCTTCTCACGAAAGGGGGCACATGGATCTGGGTTCAGGCCAATGCTAGGCTTGTTTATAAAGGAGGAAGGCCAGACTTCATTATTGCTCGACAAAGAGCACTAACtaatgaggAGGGTGAGGAACACCTCCGTCAGAGGAAGTTGCAGCTGCCCTTTAGCTGCACCACTGGTGAGGGTGTCTTGTATGAGACTGGCCCCACACTGGACATTACTGACATTCAAAATCCAAGCAAAGGCCAGAAGATGCACAAACCTCAATCTCTAGACCCAGATTCTCTTCTCGGCTGCATGCTGAAACAGGATCATTCCGTCTACAACCAGAACAATGACCCCAATTCCCAGTTCACCCTTGACAAGGCTTTCGGGGATAGCCACGCCCTGCTCAATGTCCCTGGGAACACCTGGCAGCCGTCAGCCCCAAACACTGTGGCTGGAATAAAGGAGGAAGGTGTGGTAAAGGACATGATGGAAAGCTTGCAACAGATTATTGGGGACAGCAGTATTTGCGGCCTTCAGGAGTTTGACGTGAATGAATCGGACCTGAAGGAGTGGGAGAACACTTTGCTCAGGATGAACTACAACAATGAAATGGAACTTAATGAAATCATCACCAACGACATCCTCTCTTATGTCGAGGATGCCCTTTTTAAGGAAAATGGCATTCAGATGCCCGAACAACTCAAGAGCCAGGGTCCATTTGTTGAGGTGCCTGAGTGTCTTCAAGAAATGGAGCTACAGAATAACTTAGCTGTTAACCAGGAATTCAACTGCCAGGCAGATATACTTAGTGGATCCCCAGGCGGGGGTGGTTTCATTGGAATGAATATCCAAGATGAAGTGGACGCCAGTAATCCTGGAAGAATAACGGTGAAACTCACCCATATGGGGCCACAGGTGCTACCTGGCGACACATTTGTCCAATCATTCGGACTAGAACAGACAACCCAGAAGATGCCTGGCAATAATAACATTATGTTTAATCCTTCTCTAGCCATGCAGCAGCCGACCCAAGTCAGCCTTGGTCTGCAAGGTACTGTGCAAGAGAACGGCATAGTGCCATGTGGCCAGAGAAACCTACAGCCTGGAAACCAGCCCCCTCACAACGCAATGACTCTCCCTCTTCAAAGTCCTCTATTGCAGGGCACTCCCTCCCAGCCAATGGGCTTCCATGGCCAGAATTCCCTTCCTCAACAACAGTCAATCAACCAGAACCCTCAGTGGGTGGCTAACAGCAAAAATACGATGGATAACCTCCTAAATTCATGCACCCATAACATTTCAGGTGTACAAGATACAGGACTACACTTTGGCCCAACTCCCCAACTACAAGGACAGTTTTCTCTTCACACTCAAAATGCCACCAGTTCAGGACTGCATAACTGGCAGCAGTCACAGCCTCAGCAGGTCTCCAAATTGTTTTCTAGTGGGCAACAGAATATGACAGGCTTTGTTGGCCAAGTTAAAGACTTCCAAAGAGACCTAATTGGAGAACTGATGCCGCACAAAAACGCACAAGGATTCGGGTCTGGTTTTCTGCCCCGGACAACTGCAAATAGCATTTATCCTCAGCAAGGAGAGATTATCAACAACAGCCCTCATCAGACCACCAACAGCTGCATGTTCACAGGCACTCCTCAACCATCGGTGAACGGGATGCAGTACAGTTCTGGAGATCCGATATCTTCAGTGGCATCCTGTCAGAGGGTTAAAGGTCTGGTTAACCAAAGTCCTACACAAGCATCCTGCTACTACCAAAGAGGTCCTAGCGAGTCAATCGTGGGCACGTCGGTCATCCCACAAGAAGACACCAACATCAGCCCCATGGCCTGTCGAGTCCCACTTGGGTTAACTCCAGATAATGTACTTGCTCAGCAGTATCTCTCCTGCAACGACCAGACACAGATCTCAAACCGTCCACTTGAGGAGAAAGGAACGTTCCATTTTCCGTCACTGACCAATGGAACCACCTATTTTTCAGAGAACAACCAAAGCAATTGCTGTGACTATTAAATCACACTCAATACAGCCACACATCAACAGTGCTGTACCTTTTCTAGGAACTTGTTTGTCCCTCGAGAGACACGCATCTGCTTCTAAAGACACTCTTGGCTGAAAACCTACAAGACATTACAGaactttaaaaagcaattttaccacacattttttttcacccttATATACTTGTTCACTTGTTCACACCCTCTCTGATGTGAAATAAGCAGTGGCccgaaagaaaatatttatttttttaagcgcGTCCTTTCATCCCTGAAggatattgttttgttttgccattCTGGCCCGGAAAAAGAGTGAGATAGCGAGTGTAATAACAAGGAGAGGCGTGTgagcaagtgtgtgtttgtgtctatgTGTGCGCGAGGTAGCCTAGAGTTCATTTATGAAGTATACAGAAGCAACGGTGGAGCCTTTTAATTGCAGGGATGGGATTCTGAGGAAATTCAAGGTGCACGCAAGATGCTATTTATTGGGGTAAGTTTCGACTCAAAAAGGGAAAGTCTGTCTAAGAGAGGGCATGAAATTGGCTCTCTGTAGACCTTAGTGTTATCAATGTACTGTTATCAATGTACAATGTACACTTTCTCGACAGAAATACTCTACTTATGGCCTCTGTGGCACCATTGGATTGTCAGAGCGAGTcattaaatttgacattttcccAGAATTTCCCTGAAGCTCCACCCACTGCACGTAATAAAGTTGTACAAGGAAAGATTTAGGTAATGCCTGCAAAATGAATAGTCCCAGGACACTTTTTCTTCTCAACAACACTTTTTACATTCAAAGAGTAAAAACTGTCTGCTCTTTTATGGTTGCGTTAACCATATGTTTCATGTGTATTACAACAATATCTGAATGTTATCGCTtattgtacacattttttttttgtctgtttgtttaaaatgtgtcttttgtacttttttatgcatataatcGAAATTACGGAAACGCCATTGAGCCATTTTTGTCCACTTTTAATTTGCCGATTTCCCTCTTGCGTTCTGTTTGCGTCGACACTTATATGGAAGAATTCCAGTAATTCTTAAATTGTGTTGCGTGCCATGAGAATCACAGCAGCCAGCATATCCTGCCTCCAGAAGAAAGGTAAAATCGAATGTCTTCTAAAGACAGAACAGACTACGTGATCCCAAAAGTAAATGTTTGTcgagataactttttttttttttcacgaccACGGTGAGAGTTCTTGTTTAATCAGGAAATACAGCGGCAgccaaaaagtttaaaagaagcACAGTGTAGAGAATGCtctcaaaattgtgagattGTTCGGAAAAAATTGGGTTTGCGTAAATTTGTATGCATTCGATTGAATCCGATTTCTGTAGAAATTCTCTTTTCGTAAAACGACTTCGCAGGCCCCTTTGTGCCTTATTTTGCAAGAATATAAAGCCATTTGATTCGATTGTATCAGCACtttgaatgtgtgtatatatatatatatatatatatatatatatatatatatatataaaaacatgtttggaTCAAGATGCTGTAGCTATAGACATATGACTGATTGGTTATATTTTGCAAAATGAACTCTGTGAAAAGGCCTTAATTTCTTTCAGCCCAAAGGTTATTCCACTTATTTCCCTCCCGTCTTCACTCTCTTTGGACGAAATGATCGTGGCTTGCAGAGGAGGAAAGGAATTGAAATGGCAGCTATAATTGAATCTGAGAAGCAATGTTTTTAACAactggttgttgttgttagcATGGACGGAATCGATTGCGCTAGTTTGTTAAGTGTTGTACATAGCCTCACAGTTCAAGAGTTACGGGACACTTTCTACTCGACTTCTTAAGTGCCTTCAGACAGCTTTCGTTTTCTGAGATCAGCGACTTTTTCTGCTCCCTTTGATTTCATTTGAACCGAAAGCTAAAGGAGTTGTAATGTAAATAAGAGCGTTCTGTATTTTATTGCCAGATGTCTGCTGGCTAAGAGAGGAGGTTGGTAATCGCTAGaagatttatttgattgatGGTTGGTTAATGGACGATCGATCCGTTGATCGCTTGACAGATTGATTACGCACAAATAGTAGCGACGGATTTGGTTTGCGCTGACGTTCGTTTTCATGCTTTGAAATCTATCTACTACGCCATGTCCTAACCAGGCTATGAAACCTCTTCTTGCACTGGGTAGCTCCGTCCACAGTGCTGTATAttaaatcagtggttctcaaatgGCTTTGCTTCAGGACTTTACCGTGGCGTTTATTATACAAAAGCCATTATTGTACAAAGCGGCTCGTTTGTTTCGATCATTTCACAACTGGTATTTTATGTATCTTATATTCTTCctgtgacacttttttttgtgaaattaaaaattacgcacaagtccaaaaaaaaacaa

Function

symbol description
ahr2 Enables nuclear receptor activity and sequence-specific DNA binding activity. Contributes to DNA binding activity. Acts upstream of or within several processes, including fin development; ovarian follicle development; and positive regulation of transcription by RNA polymerase II. Located in cytoplasm and nucleus. Is expressed in several structures, including blood vessel; fin; mandibular arch skeleton; nervous system; and pleuroperitoneal region.

NR:

description
aryl hydrocarbon receptor-like

GO:

id name namespace
GO:0009636 response to toxic substance biological_process
GO:0030522 intracellular receptor signaling pathway biological_process
GO:0071407 cellular response to organic cyclic compound biological_process
GO:0071466 cellular response to xenobiotic stimulus biological_process
GO:0045944 positive regulation of transcription by RNA polymerase II biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0004874 obsolete aryl hydrocarbon receptor activity molecular_function
GO:0004879 nuclear receptor activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223523.1 True 5762 mRNA 0.44 11 7058157 7106640

Neighbor

gene id symbol gene type direction distance location
LOC122327118 LOC107751494,LOC107739353,LOC107653563,LOC107600951 coding downstream 55610 6997908 ~ 7002547 (-)
LOC122327115 LOC107687869,LOC107739325,LOC107653600,LOC107600976,LOC107754251 coding downstream 63523 6986565 ~ 6994634 (-)
LOC122327116 nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250 coding downstream 86197 6962514 ~ 6971960 (-)
LOC122328177 NA coding downstream 123584 6929150 ~ 6934573 (-)
LOC122327117 LOC107570603,LOC107690762 coding downstream 128887 6926964 ~ 6929270 (-)
cntnap5b cntnap5b,LOC107751476,LOC107569969,LOC107653604,LOC107739344,LOC107600954,LOC108411251,LOC105905662 coding upstream 128261 7234901 ~ 7283785 (-)
s100b s100b,LOC107687865,LOC107571703,LOC107600981 coding upstream 280417 7387057 ~ 7389184 (-)
aox5 aox5,LOC107600984,LOC107739315,LOC105905663 coding upstream 388021 7494661 ~ 7514404 (-)
LOC122327800 LOC107751463,LOC107571702,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107565490 coding upstream 408099 7514739 ~ 7515901 (-)
LOC122327121 LOC107751463,LOC107571702,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107565490,LOC107600988 coding upstream 411160 7517800 ~ 7518955 (-)
G150542 NA non-coding downstream 35460 7022401 ~ 7022697 (-)
G150538 NA non-coding downstream 52710 7005056 ~ 7005447 (-)
G150503 NA non-coding downstream 54039 7002960 ~ 7004118 (-)
G150494 NA non-coding downstream 117531 6939618 ~ 6940626 (-)
G150490 LOC107739322,LOC107653601,LOC107586968,LOC107687868,LOC107751479 non-coding downstream 155342 6899243 ~ 6902815 (-)
LOC122327846 NA non-coding upstream 64702 7171342 ~ 7174445 (-)
G150564 NA non-coding upstream 89713 7196353 ~ 7196683 (-)
G150571 NA non-coding upstream 124050 7230690 ~ 7231488 (-)
LOC122327085 NA non-coding upstream 184032 7290672 ~ 7296555 (-)
G150596 NA non-coding upstream 302773 7409413 ~ 7423399 (-)
LOC122327113 ahr1b,LOC107586968,LOC107687868,LOC107751479,LOC107653601,LOC107739322,LOC107600975,LOC108410580 other downstream 2595 7020754 ~ 7055562 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other downstream 119157 6822203 ~ 6939000 (-)
G150492 ahr1b,LOC107653601,LOC107600975,LOC107751479,LOC107687868,LOC107586968,LOC107739322 other downstream 144599 6906000 ~ 6913558 (-)
nab1a nab1a,LOC107687893,LOC107653562,LOC107739354,LOC107754250,LOC107600950 other downstream 168500 6846890 ~ 6889657 (-)
mfsd6a mfsd6a,LOC107687869,LOC107739325,LOC107600976,LOC107653600,LOC107754251,LOC105022531 other downstream 184957 6865223 ~ 6873200 (-)
LOC122327776 LOC107751486,LOC107656680,LOC107565498,LOC107653539,LOC107715642,LOC107600957,LOC107751482 other upstream 503216 7609856 ~ 7618398 (-)
tmem264 tmem264,LOC107715063,LOC107757465,LOC107665501,LOC107653574,LOC107588123,LOC107561895 other upstream 1179732 8286372 ~ 8293208 (-)
zbtb37 zbtb37,LOC107588063,LOC107757486,LOC107653628,LOC107669814,LOC107715095,LOC107592718,LOC107592717,LOC107669813,LOC107715094,LOC107757485,LOC107588062,LOC107653629 other upstream 1493710 8600350 ~ 8612744 (-)
G151107 tal1,LOC107669848 other upstream 1777481 8884121 ~ 8886941 (-)
nfia nfia,LOC107592693,LOC107599440,LOC107653654 other upstream 1906908 9013548 ~ 9171931 (-)

Expression


Co-expression Network