LOC122327890


Basic Information

Item Value
gene id LOC122327890
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 15943733 ~ 15956310 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223556.1
CTAAGTTAAATACTTTCTTTGGCGAGTTTCTTCATATCACAGTGTGAGCAAACTAGCAGAATGGGGAAAATGAAATCAAGTCTTGCTTTATGTCTTTGGATATGCTTCACCGTTTATGTTTCTACATCAAATGGATGCTCTGAGATCCCGGTGGTAGAGAATGCAGAAGTTGCTGAAAGCGCCAGAAAAACCCAGTACTCTCAGGGTGATACACTTGAATACAATTGCAGACCTGGCTATGCCTCTCTGATAAAAATCATCTACAAGTGCAACAATGATACATGGGGAAAATGGCGTGGTGAAAAATGTTCACTCAAACGCTGCGAATCACCTCAAGATCTTCCAAATGGTCGTTACATTGTTAAAAGTGGCAGgggttttgtttttggaacGGTCATCCAGTATATCTGCAATGAAGGCTACCAGATGATGAGTCGATTTGACACCAGAACATGTCGGGATGGTGGATGGGACAATCAATTACCTGCATGTGATGAGATAAGTTGTGAACGAAAAGAGGCAGAGGGAAACCTTAGAGTGGAGGGACTCCCAGACAACCCTGAGGACTTGATCCGATACGGACACAGGTTGACATTTTCATGTGAGGGTTTAGGACTGAGTTTACATGGAAAGAAAGTGATCACCTGTCAGTTAAATGGAGAATGGAGCGACCCATTTCCTAAATGTGTCGATGCATGTGAACGAAAAACTGTAGGGGGAATTATCAAAGTAGAGGGGTTCCCTGACAAACCTGAGGACTTGATCAAATATGGACACAAATTGAAATTTTCATGTGATGGTTCTGAATTTAATTTacaaggaaagaaagaaatcaccTGCCAGCCAAATGGAAAATGGAGCAGCCCATTTCCTAAATGTGTTGCTAAAGATGTTATTTGTAAGGAGGAACCACTCATCAATGTTGCCATTTTAATTGGACATCCAGTTATTGCTCCACCTTATAACCCTGGACACGTGTTAGTTTTTGATTGCACTGATGAGAAAATGGAGATGCAAGGACATCGAGCAATTGAGTGTTTGTCCAGTGGAAAATGGGATCACCCGTATCCAAAATGTAAAGAAACTCCCTGTAAGGATGAAAAAAACGATCGATGTTGAAATTTTAACTCAACATCCACGTATTGCTTCACAATATAAACCTGGACATGTTTTAGTTTTCCAATGCACTGATGAGAACAAGAAGATTCAAGGACAACGAGCAATTAAATGCCTGTCAAATGGAGAATGGGATCACCCATACCCACAATGTGAAGAGATTAGATGTGAAATTCCACATAACCAGAATGTGTTCAAACCATCTGATAACTTCTTCGGAGATATGAAACTGGGATCGAAACAAATTTACTCTTGCGAGGCTGGGTATGAGAAAATGGCAGAAGAGGCCACATGTACACGAGACGGATGGACACCAAAACCACTGTGTGCAAGTACGTTcttcttttaaatttcatttgaaaat
>XM_043223557.1
CTAAGTTAAATACTTTCTTTGGCGAGTTTCTTCATATCACAGTGTGAGCAAACTAGCAGAATGGGGAAAATGAAATCAAGTCTTGCTTTATGTCTTTGGATATGCTTCACCGTTTATGTTTCTACATCAAATGGATGCTCTGAGATCCCGGTGGTAGAGAATGCAGAAGTTGCTGAAAGCGCCAGAAAAACCCAGTACTCTCAGGGTGATACACTTGAATACAATTGCAGACCTGGCTATGCCTCTCTGATAAAAATCATCTACAAGTGCAACAATGATACATGGGGAAAATGGCGTGGTGAAAAATGTTCACTCAAACGCTGCGAATCACCTCAAGATCTTCCAAATGGTCGTTACATTGTTAAAAGTGGCAGgggttttgtttttggaacGGTCATCCAGTATATCTGCAATGAAGGCTACCAGATGATGAGTCGATTTGACACCAGAACATGTCGGGATGGTGGATGGGACAATCAATTACCTGCATGTGATGAGATAAGTTGTGAACGAAAAGAGGCAGAGGGAAACCTTAGAGTGGAGGGACTCCCAGACAACCCTGAGGACTTGATCCGATACGGACACAGGTTGACATTTTCATGTGAGGGTTTAGGACTGAGTTTACATGGAAAGAAAGTGATCACCTGTCAGTTAAATGGAGAATGGAGCGACCCATTTCCTAAATGTGTCGCTAAAGATGTTATTTGTAAGGAGGAACCACTCATCAATGTTGCCATTTTAATTGGACATCCAGTTATTGCTCCACCTTATAACCCTGGACACGTGTTAGTTTTTGATTGCACTGATGAGAAAATGGAGATGCAAGGACATCGAGCAATTGAGTGTTTGTCCAGTGGAAAATGGGATCACCCGTATCCAAAATGTAAAGAAACTCCCTGTAAGGATGAAAAAAACGATCGATGTTGAAATTTTAACTCAACATCCACGTATTGCTTCACAATATAAACCTGGACATGTTTTAGTTTTCCAATGCACTGATGAGAACAAGAAGATTCAAGGACAACGAGCAATTAAATGCCTGTCAAATGGAGAATGGGATCACCCATACCCACAATGTGAAGAGATTAGATGTGAAATTCCACATAACCAGAATGTGTTCAAACCATCTGATAACTTCTTCGGAGATATGAAACTGGGATCGAAACAAATTTACTCTTGCGAGGCTGGGTATGAGAAAATGGCAGAAGAGGCCACATGTACACGAGACGGATGGACACCAAAACCACTGTGTGCAAGTACGTTcttcttttaaatttcatttgaaaatgaattaaaaaaattatacttacAGTTACACTTCCCTACAAATGTATTGGGACAGCGTGGCcaatccatttatttttctgtctgtaGACTAAAAACAGATATTTACGTGCTAGATTTTTATTCTGGGTATCTACATCTGAATCTGACACACAACTTAAAAGACCTTTTGTTTGAGCCCACCCATTTTTCATGTGAGCAAAAGTATTGGAACATGTGACTGACATGTGTATTTTGTTACCCAGATGTGTCCTATAATTATTCAAACAATAATTAGCAATGAATGTCTACACTCAAGCTGTGTCCAAAATGGCATTCTACTTGAGTAGGTTTTTCGAATATGACGTCTCTTCT

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223556.1 False 1480 mRNA 0.41 9 15943733 15955960
XM_043223557.1 True 1638 mRNA 0.40 8 15943733 15956310

Neighbor

gene id symbol gene type direction distance location
LOC122327226 LOC107556173 coding upstream 5551 15901132 ~ 15938182 (+)
LOC122327224 NA coding upstream 57488 15879254 ~ 15886245 (+)
aspm LOC107712224,LOC107699437,LOC107586448,LOC107556171,LOC107577714 coding upstream 191246 15735901 ~ 15752487 (+)
LOC122327180 LOC107593352,LOC107717987,LOC107679830,LOC107593351,LOC107717988,LOC107679833 coding upstream 654841 15220447 ~ 15288892 (+)
ddx59 ddx59,LOC107717990,LOC107578347 coding upstream 748861 15189827 ~ 15194872 (+)
LOC122327228 LOC107565915,LOC107709523,LOC107680281,LOC107565908,LOC107706842,LOC107680280 coding downstream 142421 16098731 ~ 16099807 (+)
trnaa-agc_18 NA coding downstream 166130 16122440 ~ 16122512 (+)
trnaa-agc_19 NA coding downstream 170226 16126536 ~ 16126608 (+)
trnaa-agc_20 NA coding downstream 171600 16127910 ~ 16127982 (+)
trnaa-agc_21 NA coding downstream 172976 16129286 ~ 16129358 (+)
LOC122327891 NA non-coding upstream 50595 15773705 ~ 15893138 (+)
G153236 NA non-coding upstream 106979 15835260 ~ 15836754 (+)
G153231 NA non-coding upstream 112642 15827770 ~ 15831091 (+)
G153233 NA non-coding upstream 129647 15795830 ~ 15814086 (+)
G153244 NA non-coding upstream 141574 15795439 ~ 15802159 (+)
G153320 NA non-coding downstream 24812 15981122 ~ 15981346 (+)
G153321 NA non-coding downstream 26282 15982592 ~ 15982822 (+)
G153364 NA non-coding downstream 294130 16250440 ~ 16250973 (+)
G153399 NA non-coding downstream 347421 16303731 ~ 16305650 (+)
G153418 NA non-coding downstream 464342 16420652 ~ 16481470 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other upstream 231647 15623093 ~ 15712086 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other upstream 723969 15195916 ~ 15219764 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other upstream 1155040 14782382 ~ 14788693 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other upstream 1251925 14686504 ~ 14691808 (+)
G152767 cp,LOC107572087,LOC107732248 other upstream 1481073 14458149 ~ 14462660 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other downstream 48254 16004564 ~ 16035615 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other downstream 121271 16077581 ~ 16078895 (+)
LOC122327131 NA other downstream 207073 16163383 ~ 16171629 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other downstream 361077 16317387 ~ 16386176 (+)
G153432 slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730 other downstream 537392 16493702 ~ 16499413 (+)

Expression


Co-expression Network