LOC122327917 (LOC107710809,LOC107574827,LOC107667624,LOC107698297,LOC107575765,LOC107570670)


Basic Information

Item Value
gene id LOC122327917
gene name LOC107710809,LOC107574827,LOC107667624,LOC107698297,LOC107575765,LOC107570670
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 1022748 ~ 1030444 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223599.1
GGTGCGGGGCCATTTTCTTCTGCTCGGTGTTCCTCTGAATCAGTGACGGGCTCGAGCTCACTGTCAGTTGCAGCTAAACCCCGAAATCATGAAATCACGCTGATTTTAATCACCGCGGACACAGTCACTCTCCTCGCGAGCATGAAGAAAGGATCGCTCAATTTCCTGGGTCGGAAGAATCAGTCTCTCTTCGACACCAATGTGGAGTTCAAGGACATGGaTAAAGTGGAGCTGGTGTTGGACTCAGCTGCCATCCCCGAGTCTGGAACCGCTAAAGTGCGGTCACGTCCGACTGTCAAACACTTCACGTCGTCTGAGAGTGTGCAAGGCTTTGCAGTTCCAACTCCCAAGGTACCAGTCCTTCCACCCTTCAATCAGCCCAAGATAAACGGTACAGGCACCACAAATCTCCCAAATGGAAGGATGCTTTCTGTCCCAGACCTACTCGAAGGGGAAATACTTATTCCCCCTCCGCCTAGCTCCGCCCCTCCACCCCCACCGTCCTCTtcagctcctcctcctccatcatTTGTCCCTCTCCCACCACAGTTCTTCGGTGAATTGGACCCTTCTTCAGACCGTGCAAGCCTGCATCCCCTACCATTGGGACCCCCGAAAACACCATCACTTGCTGGTTCTGATTACAGTGCAGATTTGGACCTTGCCTCCCTCAAACCTCCACCAATGCCTCCTCCAAAACCTCCATCAGAAAGCTCCAGTCTCAGAGGTTCCCTCTCTAGTCTTGACGTCCAAGATATCCCAGAATGCCCCAAGtttacaccaccaccaccccCACTGAAAGCATCACCTGTTCTTGCAAAAGCTCAGAAAACAGCACCTATAAAACCCATCCGTATGTCCTCCATACCTAATCTAGACATCCAGTCCCAAAACCCTGTACCAGCTGTTGCTTCTAACCCAACACCATCTAGCTTTAACCCCCAGAACACAGCCAAACTGTACAACGTGCAAAAAAGCACACTACTTGGTGGAGAGACAGAACGGGAAAAAAAAGTCCAGTCCATTCTGCTATTGGAAGATTCTGCTGGAAATACAGTTGGTGTTGTCAATGGGAATAATGGGAAAAATACTGGATCTTTACAACCAGGGGTGCCACCAACCAAACCAGCCCGTCGGAGCAGCTTAGGCACGTATCTACAGGAGGACCAGCCAGACATGGCACCAGTTCTTAGTGAACCCGCAAAGGTAGAGCCCAAAATAAGTCCTGAGCCTGTACTGGCACAAATACCCACTGAGGTACCAGCACCAATCAGAATCTCGCCCAAAATAGAGAAAAGAATACCTGATGTTAGGCAGGTGGTGACCCCAGTTGCATCCCCTGGCAGGCCTCGCAAGTACAGCCCTATCTTGAACCGACATCTCAACAAACGGAACGCAGACGGCTCAGTAAAGAAAGAGACCTCAACCTCACCTTTGGCCTTGCTGATGGCTGCaaaggaaagagaaaagcagagaaCTACTCTGTCCCGACAGAACAGCAACTCATCAGAGCCGGTCAGTTCTGTGATCCAACCTAGTGAAGAAAAACCAAACTCCTTCACTGTTATTCCTCGAAACCCAACACCAGACAGCCCCAACGCACAATTAAAGCCCACCACAAACATGCAACCAATCACCCCACCATTAACCAGAGTTAACCTTCCAGAAGTGTCTTACTCAAAGCCAGAGCTAAACTCAACCCCTCTACAAAGCCCAAGGAATAGCTCTGTTAGTGGACTGGGTATCCCTGTTAGAGATGTGGAAATTGGAGAAGAGTTGGTCTTCATTCCACCACCACCTGAATTTGCTAACTCGGACACTGTGGAGGAACCTCCAGTTCCCCCACCAAGTCACCCGGCTCCTGCTCCCCCTGTGAAAAGTGCCCCTCCACATTCTAAAACCTTCCTACCTGCTACATCTGCTCCTACTACCAGCTTCCCCCCGCCAAGTAACCCCGCTCCTGCTACCCCTGTAAAAAGTGCCCCTCCACCTTCTAAAACCTTCCTACCTGATACATCTGCTCCTACTACCAGCTTCCCCCCGCCAAGTAACCTCGCTCCTGCTACCCCTGTAAAACCTGCCCCTCCACCCTCTAAACCCTTACCTATTCCAATCACAAATGTTCCCCCTCCAAGCCATCCTGCTCCTGCTCCTCCACCTGCCAAACCCTCCGTACCTCCGACCCCTCCTCCTGTCACCAATGGGCCCCTCACTTCACCCAAACCTAAACCACCCAGTTCTCCTCCCAAGGCCCCTGGACCTCCCCCAAATATCCAGCACCAACCCAAACCACCTGTTCAGACCAAACCCACTCAAACCCCTGCACAAGTGGCTCCATCCGTCTCCGCTAGCCAGGCGACACTTCTCAGTATTCTTCAGAAGAAGATGCTAGAGATGGACCCCAAGCTCTCGGCTGTCAAGGAGATGGAGACCAACGGAGATGACTGGAACTCTCCACTGTCTGATGACGAAGCCACGTCACCCCCTGCCACATACAATCCTATGACAAACCGGAGCTCCACTCTGCCGGCACAAACTCGTGGAGTGGACATGAAGGAGCTGGAAAGCAAAGTGGCCAAAAAAGCTCAAAATTTGGCCACTTCGACTAAATCCCAAAACAGTAATGGACCATCAACCAAGCAgcagtttggaatgacattcaCCGTAAGACCAGGAGCCAAACAACCAATAACACCCGTCATTAAAGACGGGTCGTCCTGATCCAAAGAACATTCCTGACTGGAATTCTTCCAAAGACGTGCCTTACCTGTACATATGCACCTACCTGACAGATATTTATCGTTTTGCACCCGGTCTGGAGCTTCATTACTGCTGTCGCTAAAGTATTACTCTCTACCTGGATGTTTCTTCAGCTGTCAGTATATTCAGGTTTTGATTGCAGCTTCATCACGGACTTGCTAGAGCTGCTAAAATTGACCAATGGAGCAACTGTGCCCATACCTGCTAGATAATCTACAGacaaactcatttttatttcaaacatttaatttaattggttAATACAGTTTCTAATCAGTCGTTTAATCAGGTTTAAAATTAAGAACACCAGTAAtttctgtgtaatatttttgaatgcttttaatCATTACTGTACAATATTACTTTGTAGCTCTCAATAAGAGAGCTTCTTTTAGTGGTGCTGGATTTTTTCCAAGTCAAAAcatgatgtattttttaaaattatacaataagCCTTAAAGTTTGatcaaaacactgttttaaatggTCGCGAAGCCTTGAACACATTACCGAAGGTTCTTCTGAACTGTTTTAATATAGTCGTTTTAATATGAAGCAAGAATCAAAGAAGAAATAATGCAGTTTTGCATGAATATACTGGTTAGAAGTGCCTTTGGAGAAATAAGCTAGCATCTgctataaacatgtttttctggAAATCTCACACAGGTTTAATTGtgtgatatattatatatatatatatatatatatatatatatatatatatatatatatatatatatatctcagagACAACTGAAATAGGTCAATAATTGTGCATTAATAATCTACAAAGGTATTTGTATGACtgttcataaattattattttgaatatttaacccTTTGTTACccctaaacaaaaaatataaccacagtacagtgtaataaaaatatgcgAGAGCATAAATATACAGATAACAGAAACTTTATTAAACAGTGAAGTTTGTGAAATATGTTGTTTGCTCAAATGTGAGGTGAACAGCATTTATGCCCATTTCTgtgattaaaaaacacatttatgaa
>XM_043223601.1
CCATCCCCGAGTCTGGAACCGCTAAAGTGCGGTCACGTCCGACTGTCAAACACTTCACGGTACATCCCAAAACACGATCACATGACCACACTTCACCCGCGAGATGGAATCTAACTTAATATCATAAGTCGTCTGAGAGTGTGCAAGGCTTTGCAGTTCCAACTCCCAAGGTACCAGTCCTTCCACCCTTCAATCAGCCCAAGATAAACGGTACAGGCACCACAAATCTCCCAAATGGAAGGATGCTTTCTGTCCCAGACCTACTCGAAGGGGAAATACTTATTCCCCCTCCGCCTAGCTCCGCCCCTCCACCCCCACCGTCCTCTtcagctcctcctcctccatcatTTGTCCCTCTCCCACCACAGTTCTTCGGTGAATTGGACCCTTCTTCAGACCGTGCAAGCCTGCATCCCCTACCATTGGGACCCCCGAAAACACCATCACTTGCTGGTTCTGATTACAGTGCAGATTTGGACCTTGCCTCCCTCAAACCTCCACCAATGCCTCCTCCAAAACCTCCATCAGAAAGCTCCAGTCTCAGAGGTTCCCTCTCTAGTCTTGACGTCCAAGATATCCCAGAATGCCCCAAGtttacaccaccaccaccccCACTGAAAGCATCACCTGTTCTTGCAAAAGCTCAGAAAACAGCACCTATAAAACCCATCCGTATGTCCTCCATACCTAATCTAGACATCCAGTCCCAAAACCCTGTACCAGCTGTTGCTTCTAACCCAACACCATCTAGCTTTAACCCCCAGAACACAGCCAAACTGTACAACGTGCAAAAAAGCACACTACTTGGTGGAGAGACAGAACGGGAAAAAAAAGTCCAGTCCATTCTGCTATTGGAAGATTCTGCTGGAAATACAGTTGGTGTTGTCAATGGGAATAATGGGAAAAATACTGGATCTTTACAACCAGGGGTGCCACCAACCAAACCAGCCCGTCGGAGCAGCTTAGGCACGTATCTACAGGAGGACCAGCCAGACATGGCACCAGTTCTTAGTGAACCCGCAAAGGTAGAGCCCAAAATAAGTCCTGAGCCTGTACTGGCACAAATACCCACTGAGGTACCAGCACCAATCAGAATCTCGCCCAAAATAGAGAAAAGAATACCTGATGTTAGGCAGGTGGTGACCCCAGTTGCATCCCCTGGCAGGCCTCGCAAGTACAGCCCTATCTTGAACCGACATCTCAACAAACGGAACGCAGACGGCTCAGTAAAGAAAGAGACCTCAACCTCACCTTTGGCCTTGCTGATGGCTGCaaaggaaagagaaaagcagagaaCTACTCTGTCCCGACAGAACAGCAACTCATCAGAGCCGGTCAGTTCTGTGATCCAACCTAGTGAAGAAAAACCAAACTCCTTCACTGTTATTCCTCGAAACCCAACACCAGACAGCCCCAACGCACAATTAAAGCCCACCACAAACATGCAACCAATCACCCCACCATTAACCAGAGTTAACCTTCCAGAAGTGTCTTACTCAAAGCCAGAGCTAAACTCAACCCCTCTACAAAGCCCAAGGAATAGCTCTGTTAGTGGACTGGGTATCCCTGTTAGAGATGTGGAAATTGGAGAAGAGTTGGTCTTCATTCCACCACCACCTGAATTTGCTAACTCGGACACTGTGGAGGAACCTCCAGTTCCCCCACCAAGTCACCCGGCTCCTGCTCCCCCTGTGAAAAGTGCCCCTCCACATTCTAAAACCTTCCTACCTGCTACATCTGCTCCTACTACCAGCTTCCCCCCGCCAAGTAACCCCGCTCCTGCTACCCCTGTAAAAAGTGCCCCTCCACCTTCTAAAACCTTCCTACCTGATACATCTGCTCCTACTACCAGCTTCCCCCCGCCAAGTAACCTCGCTCCTGCTACCCCTGTAAAACCTGCCCCTCCACCCTCTAAACCCTTACCTATTCCAATCACAAATGTTCCCCCTCCAAGCCATCCTGCTCCTGCTCCTCCACCTGCCAAACCCTCCGTACCTCCGACCCCTCCTCCTGTCACCAATGGGCCCCTCACTTCACCCAAACCTAAACCACCCAGTTCTCCTCCCAAGGCCCCTGGACCTCCCCCAAATATCCAGCACCAACCCAAACCACCTGTTCAGACCAAACCCACTCAAACCCCTGCACAAGTGGCTCCATCCGTCTCCGCTAGCCAGGCGACACTTCTCAGTATTCTTCAGAAGAAGATGCTAGAGATGGACCCCAAGCTCTCGGCTGTCAAGGAGATGGAGACCAACGGAGATGACTGGAACTCTCCACTGTCTGATGACGAAGCCACGTCACCCCCTGCCACATACAATCCTATGACAAACCGGAGCTCCACTCTGCCGGCACAAACTCGTGGAGTGGACATGAAGGAGCTGGAAAGCAAAGTGGCCAAAAAAGCTCAAAATTTGGCCACTTCGACTAAATCCCAAAACAGTAATGGACCATCAACCAAGCAgcagtttggaatgacattcaCCGTAAGACCAGGAGCCAAACAACCAATAACACCCGTCATTAAAGACGGGTCGTCCTGATCCAAAGAACATTCCTGACTGGAATTCTTCCAAAGACGTGCCTTACCTGTACATATGCACCTACCTGACAGATATTTATCGTTTTGCACCCGGTCTGGAGCTTCATTACTGCTGTCGCTAAAGTATTACTCTCTACCTGGATGTTTCTTCAGCTGTCAGTATATTCAGGTTTTGATTGCAGCTTCATCACGGACTTGCTAGAGCTGCTAAAATTGACCAATGGAGCAACTGTGCCCATACCTGCTAGATAATCTACAGacaaactcatttttatttcaaacatttaatttaattggttAATACAGTTTCTAATCAGTCGTTTAATCAGGTTTAAAATTAAGAACACCAGTAAtttctgtgtaatatttttgaatgcttttaatCATTACTGTACAATATTACTTTGTAGCTCTCAATAAGAGAGCTTCTTTTAGTGGTGCTGGATTTTTTCCAAGTCAAAAcatgatgtattttttaaaattatacaataagCCTTAAAGTTTGatcaaaacactgttttaaatggTCGCGAAGCCTTGAACACATTACCGAAGGTTCTTCTGAACTGTTTTAATATAGTCGTTTTAATATGAAGCAAGAATCAAAGAAGAAATAATGCAGTTTTGCATGAATATACTGGTTAGAAGTGCCTTTGGAGAAATAAGCTAGCATCTgctataaacatgtttttctggAAATCTCACACAGGTTTAATTGtgtgatatattatatatatatatatatatatatatatatatatatatatatatatatatatatatatctcagagACAACTGAAATAGGTCAATAATTGTGCATTAATAATCTACAAAGGTATTTGTATGACtgttcataaattattattttgaatatttaacccTTTGTTACccctaaacaaaaaatataaccacagtacagtgtaataaaaatatgcgAGAGCATAAATATACAGATAACAGAAACTTTATTAAACAGTGAAGTTTGTGAAATATGTTGTTTGCTCAAATGTGAGGTGAACAGCATTTATGCCCATTTCTgtgattaaaaaacacatttatgaa

Function

NR:

description
PREDICTED: extensin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223599.1 True 3783 mRNA 0.46 5 1022748 1030444
XM_043223601.1 False 3602 mRNA 0.45 4 1022748 1028938

Neighbor

gene id symbol gene type direction distance location
lamb3 lamb3,LOC101885031 coding downstream 11141 1000531 ~ 1011607 (-)
cacna1sa cacna1sa,cacna1s,LOC107667627,LOC105900081,LOC106583479 coding downstream 63667 941317 ~ 959081 (-)
kctd20 kctd20,LOC107572550,LOC107667635,LOC107726526 coding downstream 81726 936431 ~ 941022 (-)
cept1b cept1,cept1b,LOC107572554,LOC103025726,LOC108413012 coding downstream 96850 918418 ~ 925898 (-)
dram2b dram2,dram2b,LOC107726524,LOC107750688,LOC107572549 coding downstream 104561 913949 ~ 918187 (-)
LOC122328113 LOC107749352,LOC107698282,LOC107599107,LOC107599106,LOC107574663,LOC107750708 coding upstream 8383 1038827 ~ 1048237 (-)
LOC122328117 NA coding upstream 111114 1141558 ~ 1152393 (-)
LOC122327988 NA coding upstream 393432 1423876 ~ 1427302 (-)
trnai-aau_112 NA coding upstream 402413 1432857 ~ 1432930 (-)
trnag-gcc_102 NA coding upstream 403001 1433445 ~ 1433515 (-)
G148477 NA non-coding downstream 3709 1018531 ~ 1019039 (-)
LOC122328046 NA non-coding downstream 49304 972557 ~ 973444 (-)
G148198 NA non-coding downstream 50605 970948 ~ 972143 (-)
G148195 NA non-coding downstream 53960 967876 ~ 968788 (-)
G148180 LOC107698300,LOC107570675,LOC107572545,LOC107667626 non-coding downstream 115219 906493 ~ 907529 (-)
G148492 NA non-coding upstream 26743 1057187 ~ 1057397 (-)
G148493 NA non-coding upstream 74933 1105377 ~ 1111286 (-)
G148505 NA non-coding upstream 108567 1139011 ~ 1139427 (-)
G148509 NA non-coding upstream 116063 1146507 ~ 1147221 (-)
G148524 LOC107563976,LOC107655406 non-coding upstream 164168 1194612 ~ 1290685 (-)
LOC122328005 NA other downstream 61845 959690 ~ 960903 (-)
arl8a arl8a,LOC107750681,LOC107722853,LOC107671521,LOC107569762,LOC105900530,LOC107575230 other downstream 189293 827665 ~ 833455 (-)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536 other downstream 234537 783851 ~ 788211 (-)
G148119 NA other downstream 342851 674976 ~ 679897 (-)
G148116 NA other downstream 351328 667504 ~ 671420 (-)
G148573 NA other upstream 431429 1461873 ~ 1463176 (-)
LOC122327995 NA other upstream 549846 1580290 ~ 1625907 (-)
LOC122327997 NA other upstream 552571 1583015 ~ 1614538 (-)
G148574 NA other upstream 613266 1643710 ~ 1654340 (-)
G148613 NA other upstream 630741 1661185 ~ 1664627 (-)

Expression


Co-expression Network