bysl (bysl,LOC107569751)


Basic Information

Item Value
gene id bysl
gene name bysl,LOC107569751
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 753236 ~ 758559 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223665.1
cacacacacacacacacacacacagcgccaTTTGCTTCAGACACACGTGTGTTCGGATCTCAGCTGCGTGCCATGACTTTAAACccgaatgaataataataataataatactaataatactaataattcgTCGTCATGCCGAAGGTGAAGAAGAGTAAAGGCGCTCCGGGGCGCGGCGGGGCTCTGTCTCTCGCCGATCAGATCCTGCAGGAGGACGCGGTCCGGTCCAGCGGCCGACAGAAGAACCGGAGCCGGTCCGAGGAGGAGCAGGAGTACGTGGACGAGAAACTGTCCAGAAAGATCCTCCAGCAGGCCAGAATCCAGCAGGAGGAGCTGCAGAGCGAGCTGGGACTGACCCCGGAGTCCAGGAGACCACCGACCACCAGACTGggtcagagcaCACAGGACGACTCTGATGATGATTGGCCGGCGCTGGGTGAAGAGACGAGTGGAGAGGTGGAGGTGGACCCTGAAGATGAGAGAGCCATCGAGATGTTCATGAACAAGAACCCCCCGCtcagGCGCACGCTGGCGGACATCATCCTGGAGAAGATCACGGAGAAGCAGACGGAGGTGGGGACGGTGCTGTCGGAGGTGTCTGGACACGGCGCTCCTCAGCTGGACCCGCGGGTGCTGGAGGTGTACAGAGGGGTGGGCAAGGTGCTGTCGAAGTACCGCAGCGGAAAACTGCCCAAAGCCTTCAAGATCATCCCGGCTCTGTCCAACTGGGAGCAGGTTCTGTATCTGACCAATCCTGAGACCTGGACGGCCGCCGCCATGTACCAGGCCaccagGATCTTCTCGTCCAATCTGAAGGAGAGAATGGCTCAGCGCTTCTACAATCTGGTTCTGCTGCCCAGGATCCGAGACGACATCGCCGAGTTCAAGAAGCTCAACTTCCACCTCTACAGCGCTCTGAAGAAAGCGCTCTTCAAACCCGGAGCCTGGTTCAAAGgaatCCTCCTCCCTCTGTGTGAGTCTGGCACATGTTCTCTGAGAGAAGCCATCATCATCGGCAGCATCCTCACGCGGTGCTCTATACCTGTGCTGCACTCCAGCGCCGCCATGCTGAAAATCTCAGAGATGGAGTACAACGGAGCCAGCAGCATCTTCCTGCGTCTGCTGCTGGACAAGAAGTACGCCCTGCCCTTCCGCGTGCTGGACGCCCTGGTCGCTCACTTCCTGTCGTTCCGCGCGGACCAGCGGACGCTTCCTGTGCTGTGGCACCAGAGCCTGCTGACGCTCACGCAGCGCTACAAGGCGGACCTGTCCTCCGAACAGAAGGAGGCGCTGCTGGAGCTGCTGAAGAGCCAGACGCACGCCTCCATTTCTCCCGAGGTCCGGCGCGAGCTGCAGGGCGCCGAGTCACGTGACCAGGAGGACGCCACGCCCCCAGCGGCCCTCGACTGAGCGACTTCCGGCGGGACTGATCACACGCAGTATATTACACGTTCTTCACGGTAATGCGCCGTTTGTACTTTTCGACTGAACTTTTGGTTAAAACTTGTGTTGctaagtaataaaataacatcaatTCAGaa
>XM_043223666.1
cacacacacacacacacacacacagcgccaTTTGCTTCAGACACACGTGTGTTCGGATCTCAGCTGCGTGCCATGACTTTAAACccgaatgaataataataataataatactaataatactaataattcgTCGTCATGCCGAAGGTGAAGAAGAGTAAAGGCGCTCCGGGGCGCGGCGGGGCTCTGTCTCTCGCCGATCAGATCCTGCAGGAGGACGCGGTCCGGTCCAGCGGCCGACAGAAGAACCGGAGCCGGTCCGAGGAGGAGCAGGAGTACGTGGACGAGAAACTGTCCAGAAAGATCCTCCAGCAGGCCAGAATCCAGCAGGAGGAGCTGCAGAGCGAGCTGGGACTGACCCCGGAGTCCAGGAGACCACCGACCACCAGACTGggtctgtgcaCACAGGACGACTCTGATGATGATTGGCCGGCGCTGGGTGAAGAGACGAGTGGAGAGGTGGAGGTGGACCCTGAAGATGAGAGAGCCATCGAGATGTTCATGAACAAGAACCCCCCGCtcagGCGCACGCTGGCGGACATCATCCTGGAGAAGATCACGGAGAAGCAGACGGAGGTGGGGACGGTGCTGTCGGAGGTGTCTGGACACGGCGCTCCTCAGCTGGACCCGCGGGTGCTGGAGGTGTACAGAGGGGTGGGCAAGGTGCTGTCGAAGTACCGCAGCGGAAAACTGCCCAAAGCCTTCAAGATCATCCCGGCTCTGTCCAACTGGGAGCAGGTTCTGTATCTGACCAATCCTGAGACCTGGACGGCCGCCGCCATGTACCAGGCCaccagGATCTTCTCGTCCAATCTGAAGGAGAGAATGGCTCAGCGCTTCTACAATCTGGTTCTGCTGCCCAGGATCCGAGACGACATCGCCGAGTTCAAGAAGCTCAACTTCCACCTCTACAGCGCTCTGAAGAAAGCGCTCTTCAAACCCGGAGCCTGGTTCAAAGgaatCCTCCTCCCTCTGTGTGAGTCTGGCACATGTTCTCTGAGAGAAGCCATCATCATCGGCAGCATCCTCACGCGGTGCTCTATACCTGTGCTGCACTCCAGCGCCGCCATGCTGAAAATCTCAGAGATGGAGTACAACGGAGCCAGCAGCATCTTCCTGCGTCTGCTGCTGGACAAGAAGTACGCCCTGCCCTTCCGCGTGCTGGACGCCCTGGTCGCTCACTTCCTGTCGTTCCGCGCGGACCAGCGGACGCTTCCTGTGCTGTGGCACCAGAGCCTGCTGACGCTCACGCAGCGCTACAAGGCGGACCTGTCCTCCGAACAGAAGGAGGCGCTGCTGGAGCTGCTGAAGAGCCAGACGCACGCCTCCATTTCTCCCGAGGTCCGGCGCGAGCTGCAGGGCGCCGAGTCACGTGACCAGGAGGACGCCACGCCCCCAGCGGCCCTCGACTGAGCGACTTCCGGCGGGACTGATCACACGCAGTATATTACACGTTCTTCACGGTAATGCGCCGTTTGTACTTTTCGACTGAACTTTTGGTTAAAACTTGTGTTGctaagtaataaaataacatcaatTCAGaa

Function

symbol description
bysl Predicted to enable snoRNA binding activity. Predicted to be involved in rRNA processing. Predicted to be part of preribosome, small subunit precursor. Predicted to be active in cytoplasm and nucleolus. Is expressed in several structures, including alar plate midbrain region; musculature system; nervous system; pectoral fin bud; and segmental plate. Orthologous to human BYSL (bystin like).

NR:

description
bystin isoform X1

GO: NA

KEGG:

id description
K14797 ENP1, BYSL; essential nuclear protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223665.1 False 1541 mRNA 0.58 7 753236 758559
XM_043223666.1 True 1541 mRNA 0.58 7 753236 758559

Neighbor

gene id symbol gene type direction distance location
ccnd3 LOC107656907,LOC107572366,LOC107723118 coding downstream 401 748168 ~ 752835 (-)
dstyk dstyk coding downstream 14487 722123 ~ 738749 (-)
nbl1 nbl1,LOC107573770,LOC107719025,LOC107656914,LOC107690543 coding downstream 92063 650321 ~ 661173 (-)
LOC122328004 tmem88b,LOC107574126,LOC107690568,LOC107719046 coding downstream 108440 641855 ~ 644796 (-)
LOC122327949 NA coding downstream 117084 631746 ~ 636152 (-)
tmcc2 tmcc2,LOC107656904,LOC107569750,LOC107690538,LOC107572364 coding upstream 11104 769663 ~ 775543 (-)
cdkn1a NA coding upstream 18134 776693 ~ 780640 (-)
apobec2a apobec2a,LOC107572363,LOC107723096,LOC107656899,LOC107750676,LOC107698292 coding upstream 32675 791234 ~ 795383 (-)
btg2 LOC107671524,LOC107698306,LOC107750684,LOC107575492,LOC107576648 coding upstream 96105 854664 ~ 856754 (-)
rbbp5 rbbp5,LOC106583489,LOC106565113 coding upstream 113388 871947 ~ 878948 (-)
G148089 NA non-coding downstream 194362 482211 ~ 558874 (-)
G148091 NA non-coding downstream 272516 479495 ~ 480720 (-)
G148081 NA non-coding downstream 279690 472876 ~ 473546 (-)
G148099 NA non-coding downstream 299436 452244 ~ 453800 (-)
G148095 NA non-coding downstream 310568 441728 ~ 442668 (-)
G148154 elf3,LOC107723034,LOC107656900,LOC107572362,LOC107569764,LOC107698310 non-coding upstream 41091 799650 ~ 801950 (-)
G148088 NA non-coding upstream 92596 851155 ~ 870764 (-)
G148172 LOC107570678,LOC107698304,LOC108413010,LOC105016818,LOC106565112 non-coding upstream 123368 881927 ~ 887759 (-)
G148175 NA non-coding upstream 125596 884155 ~ 884949 (-)
G148180 LOC107698300,LOC107570675,LOC107572545,LOC107667626 non-coding upstream 147934 906493 ~ 907529 (-)
G148119 NA other downstream 73339 674976 ~ 679897 (-)
G148116 NA other downstream 81816 667504 ~ 671420 (-)
tmem240b NA other downstream 159587 590027 ~ 593649 (-)
G148042 myhz2,LOC108417180,LOC106597527,LOC106596646,LOC107681327,LOC108261437 other downstream 320637 354912 ~ 432599 (-)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536 other upstream 25292 783851 ~ 788211 (-)
arl8a arl8a,LOC107750681,LOC107722853,LOC107671521,LOC107569762,LOC105900530,LOC107575230 other upstream 69106 827665 ~ 833455 (-)
LOC122328005 NA other upstream 201131 959690 ~ 960903 (-)
G148573 NA other upstream 703314 1461873 ~ 1463176 (-)
LOC122327995 NA other upstream 821731 1580290 ~ 1625907 (-)

Expression


Co-expression Network