ccnd3 (LOC107656907,LOC107572366,LOC107723118)


Basic Information

Item Value
gene id ccnd3
gene name LOC107656907,LOC107572366,LOC107723118
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 748168 ~ 752835 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223706.1
tactgGGAACTATAGATAATGTGAGTTTCCTAGACTTAGagctaataaataatttagttttcatGAAAACTGCCATCCGCGTCACCTGCGGCGTGACGTCACAGCCACCGTTGTTCACGTGACCGCGGGCGTGTCGCGCGCAGCAGCTCGTGAACCTCGTTTTAACGGAATAAAGCCATGTGTTTTCCGCGCATCAACTGGACTACACGTGTCGTGTGTATACTCGTAGACTTGTTAGGAGTTGTGTGAGCGTCTCGCCCGCGGCTGACGGTGAGTTTGAGTCATGGAGTTGTTCTGTCACGAGCACGTCGCACCGGGCGCGAGCTCAGGACCGGTTCGCGCGTGCAGAGACGAGGTCCTGACCCGAGGCTCGCGCGTCTGTCGGAACCTGCTGAGCTCGGAGAGACCGAGCATCAAACCCGGGACCGAGCCGACCGACGAGCAGCGGTACGTGCGTCCGATCTTAACGGGATGGATGCTGCAGGTGTGTGAGGATCAGAAGTGCGAGGAGGAGGTGTTTCCTTTGGCCGCTCACTACCTGGACAGGTACATGTCCCAGAATGCCGTGCGCAGGTGTCGTCTGCAGCTGCTGGGCTGCGTCTGCATGTTCCTGGCCTCTAAACTCCGGGAGTGTGTTCCTCTGAGCGCCGCCAAGCTGTGTGTGTACACGGACCACACCGTCAGCGTCCCGGAGATCCTGCGGTGGGAGGTGCTGCTGGTGTCGTGTCTGGACTGGGATCTGGCCGCGGTTCTTCCGTCTGATTTCTTGGAGACGCTGCTGCAGACTCTGCCGCTGAGGGCCGAGGACAGGGCCCCGGTGCGGAGACACACGCTCTCATACATGGCCCTGAGCTCCACAGagctgAACTTCTCGCTCTTCGCTCCGTCGGCGGTGGCCTGCTCGTGTTTGACGGCGGCCGTGGTCAGACTGGACGTCCTGAACGAGTCCGTCCCCGACGACCTGCTGCGGCGGCTGAGGGACGTCCTGGACACGGACATGGCGCCGCTGCGCTCCTGTTTCTCGGCGCTGGAGAAGGTCATCGATCAGATGCTGCCGGCTCCGTCTGAGCTCTGACGGCTGCAGGGAACCCGCTCAGAGCCACGCGTTCTAGTGTTTCCCTCGTTCTGTTGACCGTTCCGGTGCATTAGCGCCTGTTAAAGAGGTTCGTCTTAGTTTTAATGTTGCAGATGTTCTGCACccgagcaaacacacacagacacacacacacacacacacacacacacacacacacacacacacacactgcatgacTCCACACGTGATTAATTCAGTGCACTCTTCTTGGACTCGAATACGTGCTAGAGATAGACTCTTTTTCAATTGTAAAGATaaatatgagaaaataaaaagttttgctGTGGATGGGGACGGTTTAAGATGAAATGTCGTATTTCACTCTGAAGTCAAAAGACTAAATGGTTTTGCATGAAGAAAATGAGCCTGTTCGTCATCatcaaatgattattattaaaattagatGTCAATTAAGACTAGCATGAGTTGATTTCAGTCAAACTCTGCCATGTTATAACGTGACGTGTAATAAGGATAATCAGcagattataaaaatataaccacAATTGAAGGCCCTTAAATAATCTCAATTGTCTCTGTGAAAactttttgctgtgttttgtggTAAATATAATGTAGGGTTTTTTTGGTCAGAATTAATTACCCTTTTCACCTGAAAATTAATgtgaaaagaaattatattttaatctgCATCCCAAAACACGTATTTAATACTATACAccagaaatatgcattttcaggcagcgttttatttatattttattattacttgatgtgttatacatatgtatacatgcatgtatgtgtaaatgtatttttagtatttcgTTCcagttaattattttagtacatcaagtaCACTGGAACAAAAATGATGAATCCTGCTTTGGCGACTAACTGAAATGAaggtttactttttattttatttcagtatttttcgtgtagctaaaatatttttgtgcctattttttttatcaactatAAAAACTGGTTTTGGCTCATTCTACCACTATAAAAGACCACAGACTCGTATGTAGCATATTATTTGTCTTAATTATTACCAGATTCATTAATACTTTCATTGTAAACGCTGTAACACAGTTCTCACATACTGTGGAGTATAAATGTCATTTAGGATTATCCAGGAGACTGTGATGGGAACAGAAGAACCGACAGCCAGAGAACATTTTCCACTTCACTTGTGCTGTTTTATTGTTCCATTCAGTCAAAGAGACATCAGGGCAGATAAATCAGGCACTTTGGCAAATAAACATGCAGAAATTAGAACAAAACATGACATCAAACAGAGGAACACCTCATAACCCGGGTTGTCTCGAGCCGTGACACTAGACACTGTATGAAGAGGTCAGGTGTACTGATGACCCCGAACACCCTGCTATGCACCGAAACCCCATCACATCCCATCCC

Function

NR:

description
G1/S-specific cyclin-D2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223706.1 True 2485 mRNA 0.47 5 748168 752835

Neighbor

gene id symbol gene type direction distance location
dstyk dstyk coding downstream 9419 722123 ~ 738749 (-)
nbl1 nbl1,LOC107573770,LOC107719025,LOC107656914,LOC107690543 coding downstream 86995 650321 ~ 661173 (-)
LOC122328004 tmem88b,LOC107574126,LOC107690568,LOC107719046 coding downstream 103372 641855 ~ 644796 (-)
LOC122327949 NA coding downstream 112016 631746 ~ 636152 (-)
wu:fj30f06 LOC107690564,LOC107575580,LOC107719048,LOC107564176 coding downstream 125941 620289 ~ 622227 (-)
bysl bysl,LOC107569751 coding upstream 401 753236 ~ 758559 (-)
tmcc2 tmcc2,LOC107656904,LOC107569750,LOC107690538,LOC107572364 coding upstream 16828 769663 ~ 775543 (-)
cdkn1a NA coding upstream 23858 776693 ~ 780640 (-)
apobec2a apobec2a,LOC107572363,LOC107723096,LOC107656899,LOC107750676,LOC107698292 coding upstream 38399 791234 ~ 795383 (-)
btg2 LOC107671524,LOC107698306,LOC107750684,LOC107575492,LOC107576648 coding upstream 101829 854664 ~ 856754 (-)
G148089 NA non-coding downstream 189294 482211 ~ 558874 (-)
G148091 NA non-coding downstream 267448 479495 ~ 480720 (-)
G148081 NA non-coding downstream 274622 472876 ~ 473546 (-)
G148099 NA non-coding downstream 294368 452244 ~ 453800 (-)
G148095 NA non-coding downstream 305500 441728 ~ 442668 (-)
G148154 elf3,LOC107723034,LOC107656900,LOC107572362,LOC107569764,LOC107698310 non-coding upstream 46815 799650 ~ 801950 (-)
G148088 NA non-coding upstream 98320 851155 ~ 870764 (-)
G148172 LOC107570678,LOC107698304,LOC108413010,LOC105016818,LOC106565112 non-coding upstream 129092 881927 ~ 887759 (-)
G148175 NA non-coding upstream 131320 884155 ~ 884949 (-)
G148180 LOC107698300,LOC107570675,LOC107572545,LOC107667626 non-coding upstream 153658 906493 ~ 907529 (-)
G148119 NA other downstream 68271 674976 ~ 679897 (-)
G148116 NA other downstream 76748 667504 ~ 671420 (-)
tmem240b NA other downstream 154519 590027 ~ 593649 (-)
G148042 myhz2,LOC108417180,LOC106597527,LOC106596646,LOC107681327,LOC108261437 other downstream 315569 354912 ~ 432599 (-)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536 other upstream 31016 783851 ~ 788211 (-)
arl8a arl8a,LOC107750681,LOC107722853,LOC107671521,LOC107569762,LOC105900530,LOC107575230 other upstream 74830 827665 ~ 833455 (-)
LOC122328005 NA other upstream 206855 959690 ~ 960903 (-)
G148573 NA other upstream 709038 1461873 ~ 1463176 (-)
LOC122327995 NA other upstream 827455 1580290 ~ 1625907 (-)

Expression


Co-expression Network