zgc:153675 (zgc:153675,LOC107570677,LOC107698303,LOC107723087,LOC107750711,LOC105900578,LOC102228910,LOC102797113,LOC105016822)


Basic Information

Item Value
gene id zgc:153675
gene name zgc:153675,LOC107570677,LOC107698303,LOC107723087,LOC107750711,LOC105900578,LOC102228910,LOC102797113,LOC105016822
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 892588 ~ 895753 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223730.1
atattcatgaggcgGGCCCTCGGCGTGTGCGCGCCCCGGAGCGAGCGCCACGTCACCCCGCGGAGTCGCGAGCGCGCTCTGGAGAGTCTGCGGGAGATAAACAGCGATCATGGTGAAGGTGAGAAACACGTGCATCTACAGAAATCAGGCTTTTCTTCCTCAAACATCACTTCAAGTCACGTCTGCTCGAGTTCAGGTCGTCCTGCGCGGGagcgtgaACTCAGAAGTTCAGTCCAGGAGTGAAACATATGAAGGAGCAGAAGAACCTGCAGAAACCGAGCCGTCTACAGCAGGTGGCGGTAAAGAGCACCCTGTGGCTCCGCCCACCATGATCTGGCGCGTGACGGGCGGCCTCTTCAGCGCCACGAAGGGCGTGGTCGGAGCCACGGTGGGCGGAGTCGCCTGGCTGGGCGGGAAAAGTTTGGAGATCACCAAATCAGCGGTGACCGCGGTGCCTTCGGTGGGCGTcggcctggtgaagggcggggTTTCGGCAGTGGCGGGGGGCGTGTCCACGGTGGGGTCGACGGTAGCCAATAAAGTTCCATTCACTGGAAAGAGGAAAGACAAATCAGAGTGAAGAGGAAGGGACGGTTATAAGTGATGCTGATATTTGATTGGTCGACAGAGACAGATGTTTTTGACCAATGAGCGCCCAAGACATTTGCACAAAAGGGAGTTTTGTACGTCATCCCGCGGGGTTTTGTCGTAAACCAACTCGAtctcaaaggaaaaaaatgtttttttttctcctagcATCTCAGATTCGCGACCAAAGACACATTTATCAGTGATGTTTGTTTCTGTAGCTGTTTAACGACATCACTGGATTTCTTCTGAAACGCTATCGGTCaaattttgtgtttgtaaactgcgttttttttattattgaatataaTAAAGTCATGTAAAAGAT
>XM_043223731.1
GCTagctcattaatattcatgaggcgGGCCCTCGGCGTGTGCGCGCCCCGGAGCGAGCGCCACGTCACCCCGCGGAGTCGCGAGCGCGCTCTGGAGAGTCTGCGGGAGATAAACAGCGATCATGGTGAAGGTGAGAAACACGTGCATCTACAGAAATCAGGCTTTTCTTCCTCAAACATCACTTCAAGTCACGTCTGCTCGAGTTCAGGTCGTCCTGCGCGGGagcgtgaACTCAGAAGTTCAGTCCAGGAGTGAAACATATGAAGGAGCAGAAGAACCTGCAGAAACCGAGCCGTCTACAGGTGGCGGTAAAGAGCACCCTGTGGCTCCGCCCACCATGATCTGGCGCGTGACGGGCGGCCTCTTCAGCGCCACGAAGGGCGTGGTCGGAGCCACGGTGGGCGGAGTCGCCTGGCTGGGCGGGAAAAGTTTGGAGATCACCAAATCAGCGGTGACCGCGGTGCCTTCGGTGGGCGTcggcctggtgaagggcggggTTTCGGCAGTGGCGGGGGGCGTGTCCACGGTGGGGTCGACGGTAGCCAATAAAGTTCCATTCACTGGAAAGAGGAAAGACAAATCAGAGTGAAGAGGAAGGGACGGTTATAAGTGATGCTGATATTTGATTGGTCGACAGAGACAGATGTTTTTGACCAATGAGCGCCCAAGACATTTGCACAAAAGGGAGTTTTGTACGTCATCCCGCGGGGTTTTGTCGTAAACCAACTCGAtctcaaaggaaaaaaatgtttttttttctcctagcATCTCAGATTCGCGACCAAAGACACATTTATCAGTGATGTTTGTTTCTGTAGCTGTTTAACGACATCACTGGATTTCTTCTGAAACGCTATCGGTCaaattttgtgtttgtaaactgcgttttttttattattgaatataaTAAAGTCATGTAAAAGAT
>XM_043223732.1
attcatgaggcgGGCCCTCGGCGTGTGCGCGCCCCGGAGCGAGCGCCACGTCACCCCGCGGAGTCGCGAGCGCGCTCTGGAGAGTCTGCGGGAGATAAACAGCGATCATGGTGAAGGTGAGAAACACGTGCATCTACAGAAATCAGGCTTTTCTTCCTCAAACATCACTTCAAGTCACGTCTGCTCGAGTTCAGagcgtgaACTCAGAAGTTCAGTCCAGGAGTGAAACATATGAAGGAGCAGAAGAACCTGCAGAAACCGAGCCGTCTACAGCAGGTGGCGGTAAAGAGCACCCTGTGGCTCCGCCCACCATGATCTGGCGCGTGACGGGCGGCCTCTTCAGCGCCACGAAGGGCGTGGTCGGAGCCACGGTGGGCGGAGTCGCCTGGCTGGGCGGGAAAAGTTTGGAGATCACCAAATCAGCGGTGACCGCGGTGCCTTCGGTGGGCGTcggcctggtgaagggcggggTTTCGGCAGTGGCGGGGGGCGTGTCCACGGTGGGGTCGACGGTAGCCAATAAAGTTCCATTCACTGGAAAGAGGAAAGACAAATCAGAGTGAAGAGGAAGGGACGGTTATAAGTGATGCTGATATTTGATTGGTCGACAGAGACAGATGTTTTTGACCAATGAGCGCCCAAGACATTTGCACAAAAGGGAGTTTTGTACGTCATCCCGCGGGGTTTTGTCGTAAACCAACTCGAtctcaaaggaaaaaaatgtttttttttctcctagcATCTCAGATTCGCGACCAAAGACACATTTATCAGTGATGTTTGTTTCTGTAGCTGTTTAACGACATCACTGGATTTCTTCTGAAACGCTATCGGTCaaattttgtgtttgtaaactgcgttttttttattattgaatataaTAAAGTCATGTAAAAGAT
>XM_043223733.1
CTagctcattaatattcatgaggcgGGCCCTCGGCGTGTGCGCGCCCCGGAGCGAGCGCCACGTCACCCCGCGGAGTCGCGAGCGCGCTCTGGAGAGTCTGCGGGAGATAAACAGCGATCATGGTGAAGGTGAGAAACACGTGCATCTACAGAAATCAGGCTTTTCTTCCTCAAACATCACTTCAAGTCACGTCTGCTCGAGTTCAGagcgtgaACTCAGAAGTTCAGTCCAGGAGTGAAACATATGAAGGAGCAGAAGAACCTGCAGAAACCGAGCCGTCTACAGGTGGCGGTAAAGAGCACCCTGTGGCTCCGCCCACCATGATCTGGCGCGTGACGGGCGGCCTCTTCAGCGCCACGAAGGGCGTGGTCGGAGCCACGGTGGGCGGAGTCGCCTGGCTGGGCGGGAAAAGTTTGGAGATCACCAAATCAGCGGTGACCGCGGTGCCTTCGGTGGGCGTcggcctggtgaagggcggggTTTCGGCAGTGGCGGGGGGCGTGTCCACGGTGGGGTCGACGGTAGCCAATAAAGTTCCATTCACTGGAAAGAGGAAAGACAAATCAGAGTGAAGAGGAAGGGACGGTTATAAGTGATGCTGATATTTGATTGGTCGACAGAGACAGATGTTTTTGACCAATGAGCGCCCAAGACATTTGCACAAAAGGGAGTTTTGTACGTCATCCCGCGGGGTTTTGTCGTAAACCAACTCGAtctcaaaggaaaaaaatgtttttttttctcctagcATCTCAGATTCGCGACCAAAGACACATTTATCAGTGATGTTTGTTTCTGTAGCTGTTTAACGACATCACTGGATTTCTTCTGAAACGCTATCGGTCaaattttgtgtttgtaaactgcgttttttttattattgaatataaTAAAGTCATGTAAAAGAT
>XM_043223734.1
cattaatattcatgaggcgGGCCCTCGGCGTGTGCGCGCCCCGGAGCGAGCGCCACGTCACCCCGCGGAGTCGCGAGCGCGCTCTGGAGAGTCTGCGGGAGATAAACAGCGATCATGGTGAAGagcgtgaACTCAGAAGTTCAGTCCAGGAGTGAAACATATGAAGGAGCAGAAGAACCTGCAGAAACCGAGCCGTCTACAGCAGGTGGCGGTAAAGAGCACCCTGTGGCTCCGCCCACCATGATCTGGCGCGTGACGGGCGGCCTCTTCAGCGCCACGAAGGGCGTGGTCGGAGCCACGGTGGGCGGAGTCGCCTGGCTGGGCGGGAAAAGTTTGGAGATCACCAAATCAGCGGTGACCGCGGTGCCTTCGGTGGGCGTcggcctggtgaagggcggggTTTCGGCAGTGGCGGGGGGCGTGTCCACGGTGGGGTCGACGGTAGCCAATAAAGTTCCATTCACTGGAAAGAGGAAAGACAAATCAGAGTGAAGAGGAAGGGACGGTTATAAGTGATGCTGATATTTGATTGGTCGACAGAGACAGATGTTTTTGACCAATGAGCGCCCAAGACATTTGCACAAAAGGGAGTTTTGTACGTCATCCCGCGGGGTTTTGTCGTAAACCAACTCGAtctcaaaggaaaaaaatgtttttttttctcctagcATCTCAGATTCGCGACCAAAGACACATTTATCAGTGATGTTTGTTTCTGTAGCTGTTTAACGACATCACTGGATTTCTTCTGAAACGCTATCGGTCaaattttgtgtttgtaaactgcgttttttttattattgaatataaTAAAGTCATGTAAAAGAT
>XM_043223737.1
gctcattaatattcatgaggcgGGCCCTCGGCGTGTGCGCGCCCCGGAGCGAGCGCCACGTCACCCCGCGGAGTCGCGAGCGCGCTCTGGAGAGTCTGCGGGAGATAAACAGCGATCATGGTGAAGagcgtgaACTCAGAAGTTCAGTCCAGGAGTGAAACATATGAAGGAGCAGAAGAACCTGCAGAAACCGAGCCGTCTACAGGTGGCGGTAAAGAGCACCCTGTGGCTCCGCCCACCATGATCTGGCGCGTGACGGGCGGCCTCTTCAGCGCCACGAAGGGCGTGGTCGGAGCCACGGTGGGCGGAGTCGCCTGGCTGGGCGGGAAAAGTTTGGAGATCACCAAATCAGCGGTGACCGCGGTGCCTTCGGTGGGCGTcggcctggtgaagggcggggTTTCGGCAGTGGCGGGGGGCGTGTCCACGGTGGGGTCGACGGTAGCCAATAAAGTTCCATTCACTGGAAAGAGGAAAGACAAATCAGAGTGAAGAGGAAGGGACGGTTATAAGTGATGCTGATATTTGATTGGTCGACAGAGACAGATGTTTTTGACCAATGAGCGCCCAAGACATTTGCACAAAAGGGAGTTTTGTACGTCATCCCGCGGGGTTTTGTCGTAAACCAACTCGAtctcaaaggaaaaaaatgtttttttttctcctagcATCTCAGATTCGCGACCAAAGACACATTTATCAGTGATGTTTGTTTCTGTAGCTGTTTAACGACATCACTGGATTTCTTCTGAAACGCTATCGGTCaaattttgtgtttgtaaactgcgttttttttattattgaatataaTAAAGTCATGTAAAAGAT

Function

symbol description
zgc:153675 Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 263-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223730.1 False 916 mRNA 0.52 3 892588 895741
XM_043223731.1 True 925 mRNA 0.52 3 892588 895753
XM_043223732.1 False 899 mRNA 0.52 3 892588 895739
XM_043223733.1 False 909 mRNA 0.51 3 892588 895752
XM_043223734.1 False 828 mRNA 0.52 3 892588 895746
XM_043223737.1 False 828 mRNA 0.52 3 892588 895749

Neighbor

gene id symbol gene type direction distance location
rbbp5 rbbp5,LOC106583489,LOC106565113 coding downstream 13640 871947 ~ 878948 (-)
btg2 LOC107671524,LOC107698306,LOC107750684,LOC107575492,LOC107576648 coding downstream 35834 854664 ~ 856754 (-)
apobec2a apobec2a,LOC107572363,LOC107723096,LOC107656899,LOC107750676,LOC107698292 coding downstream 97205 791234 ~ 795383 (-)
cdkn1a NA coding downstream 111948 776693 ~ 780640 (-)
tmcc2 tmcc2,LOC107656904,LOC107569750,LOC107690538,LOC107572364 coding downstream 117045 769663 ~ 775543 (-)
cry4 cry4 coding upstream 475 896228 ~ 903773 (-)
dram2b dram2,dram2b,LOC107726524,LOC107750688,LOC107572549 coding upstream 18196 913949 ~ 918187 (-)
cept1b cept1,cept1b,LOC107572554,LOC103025726,LOC108413012 coding upstream 22665 918418 ~ 925898 (-)
kctd20 kctd20,LOC107572550,LOC107667635,LOC107726526 coding upstream 40678 936431 ~ 941022 (-)
cacna1sa cacna1sa,cacna1s,LOC107667627,LOC105900081,LOC106583479 coding upstream 45564 941317 ~ 959081 (-)
G148172 LOC107570678,LOC107698304,LOC108413010,LOC105016818,LOC106565112 non-coding downstream 4829 881927 ~ 887759 (-)
G148175 NA non-coding downstream 7639 884155 ~ 884949 (-)
G148088 NA non-coding downstream 21824 851155 ~ 870764 (-)
G148154 elf3,LOC107723034,LOC107656900,LOC107572362,LOC107569764,LOC107698310 non-coding downstream 90638 799650 ~ 801950 (-)
G148127 med20,LOC107581150 non-coding downstream 132047 687125 ~ 760541 (-)
G148180 LOC107698300,LOC107570675,LOC107572545,LOC107667626 non-coding upstream 10740 906493 ~ 907529 (-)
G148195 NA non-coding upstream 72123 967876 ~ 968788 (-)
G148198 NA non-coding upstream 75195 970948 ~ 972143 (-)
LOC122328046 NA non-coding upstream 76804 972557 ~ 973444 (-)
G148477 NA non-coding upstream 122778 1018531 ~ 1019039 (-)
arl8a arl8a,LOC107750681,LOC107722853,LOC107671521,LOC107569762,LOC105900530,LOC107575230 other downstream 59133 827665 ~ 833455 (-)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536 other downstream 104377 783851 ~ 788211 (-)
G148119 NA other downstream 212691 674976 ~ 679897 (-)
G148116 NA other downstream 221168 667504 ~ 671420 (-)
tmem240b NA other downstream 298939 590027 ~ 593649 (-)
LOC122328005 NA other upstream 63937 959690 ~ 960903 (-)
G148573 NA other upstream 566120 1461873 ~ 1463176 (-)
LOC122327995 NA other upstream 684537 1580290 ~ 1625907 (-)
LOC122327997 NA other upstream 687262 1583015 ~ 1614538 (-)
G148574 NA other upstream 747957 1643710 ~ 1654340 (-)

Expression


Co-expression Network