LOC122328055


Basic Information

Item Value
gene id LOC122328055
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 16241163 ~ 16244542 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223756.1
TATTTCAACATGCCCACAGTGGCGTTGGGGTTGGAGTAAGAGCAGCGATTGGTTGAGACAAGTTACCTTGTGTGTAGtcttcatatataaaaacagtgaCGTTTAAAAAGATAAGCGCAACTGCAACCAAAGGATCATCTGACAGTCTATACAGACTTTGCTCTTAAGATGGCGGCAAATGGAAAACATTGGGTGATGCTTGTAGCGGGTTCAAAGACATGGAGCAATTACCGACACCAGGCTGATGTGTGTCACGCCTATCAGATCATACATCAGAACGGGATTCCTGACGAACAGATTGTGGTCATGATGTATGATGACATCGCCAATAACGATGACAATCCTTATCCTGGGAACATCATTAATAGACCAAACGGACCGAATGTGTATCCAGGCGTCCCAAAAGATTACACCGGAGGGGATGTTACCCCTGAAAACTTCCTGGCTGCTCTTAAAGGAGAGAGACAAAACTCtcagaaaaaagtcatttcaagTGGGGAAAATGACACAATATTCATCTATCTGTCAGATCATGGAAGTCCAGGCATATTTTGCTTTCCTAACAACACCCTTCATGCCAATGATCTCATTGAAACCATCAAGGAAATGGCGAGGAACAAGAAGTTCTCCAAGATGGTGATATATATGGAATCCTGTTTTTCTGCATCAATGTTTACCCAACTCCCAGATAACATTCATGTGTATGCAGTGACTGCAGCGGGAGCAAATGAGAGAAGTTACGCCTGTTACTTCGATCCTGTGAGGAAGACCTATCTCGCCGATGTATTCTCAGCTCTTTGGATGTACTACACTGAAACGaatgatCTCGATAAAGTAACATTCCTGAATCAGTTTAGTTATCTTCAGCAAGCGATGAATACCTCTCACCCCTGCTGTTTTGGGGACATGACAGCTGGTGAGAAACCCATCAGTGAGTTCTTGAGAAACACTCCTCGGTCCATTCAGGAGTCAGCTAAAGCTCAGCAGCTTGTGTTGACTGATTTGACACAGGCCCATGAAGTGCCTTTCAAAATCTTGGAGAATCAAATCAACATAGAAACTGATgaagacagaaaacaagatttgaTCAGAAAACTTGATGCTCTTCATCAGATTAAAGCTAAAATTGAAGGAACAGTGGAAACTATCAAACGGCACTTTCCTGACTTTGCACATGAGGATGAAGATTATTCTCAGATGGATTTACATTCTTTCAAAACCGTAGCTGAACATTTCAGGACAACCTGCTTCGACTGGCACGAGGAAGAGTTTCAGATGGccttgtcacacacacacgtgttcgCTCGTCTCTGTGCTCGTGGAGTTAAAACAGAGAGGATCATAGAGGTCATAACAAAGGTCTCCAGTCTCTAAATAAACAACACCTTTAAGAAGAACTTAAGAAGAAATTTAGATCCATCTCAtccatcaacaaaaaaaagagtcaaaTAAACCATGTGTCGACGTTC
>XM_043223757.1
TATTTCAACATGCCCACAGTGGCGTTGGGGTTGGAGTAAGAGCAGCGATTGGTTGAGACAAGTTACCTTGTGTGTAGtcttcatatataaaaacagtgaCGTTTAAAAAGATAAGCGCAACTGCAACCAAAGGATCATCTGACAGTCTATACAGACTTTGCTCTTAAGATGGCGGCAAATGGAAAACATTGGGTGATGCTTGTAGCGGGTTCAAAGACATGGAGCAATTACCGACACCAGGCTGATGTGTGTCACGCCTATCAGATCATACATCAGAACGGGATTCCTGACGAACAGATTGTGGTCATGATGTATGATGACATCGCCAATAACGATGACAATCCTTATCCTGGGAACATCATTAATAGACCAAACGGACCGAATGTGTATCCAGGCGTCCCAAAAGATTACACCGGAGGGGATGTTACCCCTGAAAACTTCCTGGCTGCTCTTAAAGGAGAGAGACAAAACTCtcagaaaaaagtcatttcaagTGGGGAAAATGACACAATATTCATCTATCTGTCAGATCATGGAAGTCCAGGCATATTTTGCTTTCCTAACAACACCCTTCATGCCAATGATCTCATTGAAACCATCAAGGAAATGGCGAGGAACAAGAAGTTCTCCAAGATGGTGATATATATGGAATCCTGTTTTTCTGCATCAATGTTTACCCAACTCCCAGATAACATTCATGTGTATGCAGTGACTGCAGCGGGAGCAAATGAGAGAAGTTACGCCTGTTACTTCGATCCTGTGAGGAAGACCTATCTCGCCGATGTATTCTCAGCTCTTTGGATGTACTACACTGAAACGaatgatCTCGATAAAGTAACATTCCTGAATCAGTTTAGTTATCTTCAGCAAGCGATGAATACCTCTCACCCCTGCTGTTTTGGGGACATGACAGCTGGTGAGAAACCCATCAGTGAGTTCTTGAGAAACACTCCTCGGTCCATTCAGGAGTCAGCTAAAGCTCAGCAGCTTGTGTTGACTGATTTGACACAGGCCCATGAAGTGCCTTTCAAAATCTTGGAGAATCAAATCAACATAGAAACTGATgaagacagaaaacaagatttgaTCAGAAAACTTGATGCTCTTCATCAGATTAAAGCTAAAATTGAAGGAACAGTGGAAACTATCAAACGGCACTTTCCTGACTTTGCACATGAGGATGAAGATTATTCTCAGATGGATTTACATTCTTTCAAAACCGTAGCTGAACATTTCAGGACAACCTGCTTCGACTGGCACGAGGAAGAGATGGccttgtcacacacacacgtgttcgCTCGTCTCTGTGCTCGTGGAGTTAAAACAGAGAGGATCATAGAGGTCATAACAAAGGTCTCCAGTCTCTAAATAAACAACACCTTTAAGAAGAACTTAAGAAGAAATTTAGATCCATCTCAtccatcaacaaaaaaaagagtcaaaTAAACCATGTGTCGACGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223756.1 True 1469 mRNA 0.42 14 16241163 16244542
XM_043223757.1 False 1463 mRNA 0.42 14 16241163 16244542

Neighbor

gene id symbol gene type direction distance location
LOC122327679 NA coding upstream 4142 16233607 ~ 16237021 (+)
LOC122327230 LOC107574244,LOC106946732 coding upstream 85612 16153142 ~ 16155551 (+)
trnaa-agc_28 NA coding upstream 91319 16149772 ~ 16149844 (+)
trnaa-agc_27 NA coding upstream 94026 16147065 ~ 16147137 (+)
trnaa-agc_26 NA coding upstream 95411 16145680 ~ 16145752 (+)
sec13 sec13,LOC107719942,LOC107557974,LOC107691189,LOC107657312 coding downstream 85183 16329725 ~ 16337118 (+)
grip2b LOC107719945,LOC108436697,LOC107720331 coding downstream 137643 16382185 ~ 16477611 (+)
manf manf,LOC107677041,LOC107691893,LOC107592842,LOC107750980,LOC107567190,LOC107708486 coding downstream 506171 16750713 ~ 16752754 (+)
rbm15b rbm15b,LOC107592829,LOC107750977,LOC107708489,LOC107567194,LOC107691881,LOC107677039 coding downstream 508361 16752903 ~ 16756930 (+)
dag1 dag1,LOC107592827,LOC107757307,LOC107691879,LOC107564392,LOC107708488,LOC107678152 coding downstream 796120 17040662 ~ 17069967 (+)
G153321 NA non-coding upstream 258341 15982592 ~ 15982822 (+)
G153320 NA non-coding upstream 259817 15981122 ~ 15981346 (+)
G153236 NA non-coding upstream 404409 15835260 ~ 15836754 (+)
G153231 NA non-coding upstream 410072 15827770 ~ 15831091 (+)
G153233 NA non-coding upstream 427077 15795830 ~ 15814086 (+)
G153364 NA non-coding downstream 5898 16250440 ~ 16250973 (+)
G153399 NA non-coding downstream 59189 16303731 ~ 16305650 (+)
G153418 NA non-coding downstream 176110 16420652 ~ 16481470 (+)
G153434 NA non-coding downstream 257212 16501754 ~ 16502104 (+)
LOC122327176 NA non-coding downstream 278088 16522630 ~ 16526808 (+)
LOC122327131 NA other upstream 69534 16163383 ~ 16171629 (+)
LOC122327825 LOC107565915,LOC107680281,LOC107709523,LOC107680280,LOC107565908,LOC107706842 other upstream 162268 16077581 ~ 16078895 (+)
G153322 LOC107565915,LOC107680281,LOC107709523,LOC107565908,LOC107680280,LOC107706842,LOC107576284 other upstream 205548 16004564 ~ 16035615 (+)
dennd1b dennd1b,LOC107712206,LOC107586420,LOC107664901,LOC107741568,LOC107556170 other upstream 529077 15623093 ~ 15712086 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other upstream 1021399 15195916 ~ 15219764 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other downstream 72845 16317387 ~ 16386176 (+)
G153432 slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730 other downstream 249160 16493702 ~ 16499413 (+)
dock3 dock3,LOC107592830,LOC107691882,LOC107567192 other downstream 356088 16600630 ~ 16749928 (+)
tsc22d2 tsc22d2,LOC107732673,LOC107679060,LOC107701225,LOC107568259,LOC107720398,LOC107551385 other downstream 1154763 17399305 ~ 17419244 (+)
G153741 LOC107661227 other downstream 1681809 17926351 ~ 17927244 (+)

Expression


Co-expression Network