LOC122328058 (hykk,hykk.2,LOC107732649,LOC107744196,LOC107551378)


Basic Information

Item Value
gene id LOC122328058
gene name hykk,hykk.2,LOC107732649,LOC107744196,LOC107551378
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 17516130 ~ 17520426 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223760.1
AACGAGTCAGACATTTTTAAGCTAACGGACTGGACGCAGTGTTGCTGTTTTGTGACGTAATGACGTCCCACAAGCGCCAGCAGAAGCTCTGTAGCTCCACAGGGCACTCCAACAACAAAAGCAGCCATGTCAACGAATGGATCAAAGCCGAATCTCAGCCATTCCCAGGTTTCAGAGCTTATCAAGCGGCTCTATGGCTTGACCGTGTCCGTCGTCCGACCGCTGCCCAGTTATGATGATCAAAACTTTTACGTGGCCCCCAATGAAGGAGGAGAATATGTGTTGAAGGTTATGAACTCAGCAGACAGTCAAAACATCACCGTTATTGAGCTGCAGACTCATGCCATGAACTTCTTACACCAAAGAGGCCTTCCTGCCCAGACCGCTTTTCCCACTCTGACTGGCCGACTCATGAGCCTGGAGGAATTTGATTGTGGGTTTGGCGTGCAGAAATATTTAGTGCGTTTACTTGCCTACCTTCCTGGTACTACTGTAGCCAAAGTTACCTGCGGTCCTCAGATCTTGTATGATGTTGGGAAAATGGCCGCCACATTGGATACAGTTCTACTGCAAATGGAGCATCCAGACATCAGCGTCCTTCAGAGAGAAGGTTTCATATGGAATCTCGCCAGCGTTCGTCTCTTAGACCAGTATATGCATGTGATGGATGGAGATCCCGTGCTAAAGGTTGTTAAAGCCGTTCTGGAGCAGTACCAGATCCACGTCGTGCCAAAACTACCGTTGTTTCGCAAATGCATCAACCACGGAGACTTCAACGACCACAATCTCTTGGTGAAACCCGATGGACCCTCGAAGCACAAGATCTCCGGGATCCTTGATTTTGGAGACATGAGCTGCGGGTATTTCATATTTGAGCTGGCCATCACCATCATGTACATGATGATTGAGAATCCCAGTCCGCTAGACGTCGGAGGGCCGGTGGTGGCGGGATGGGAAAGTGTTTTTCCTCTCAACGAGGCAGAAAGAGACTCGCTCTATTTGCTGGTTCTCTGTCGGTTCTGCCAGTCCCTGGTTCTGGCTCGACACGCGGTGATCCAGCAGCCAGAGAACGAGGAGTACTTGATGATCACCGCCAGGACAGGGGTGCGCCATCTCCGTCGGCTTTGGGAGCTGGGTAAAGAGCAAGTGGAGAGAATATGGTTCCAGAGCGCTGCACAGTTTGGCCAACCTTGACTTCAGCAGCTGCATGCTGAAAAATGATATGCAATAACCATTGAAGATATACTTTTTACCCAAAAATTCATGTTAACGACGTGAAATGATGACAATGTCAAATGGTGTTGATTTGTCTTAAGTCACACAACTTTTGACATTAATTTTAGAGCTTAATGAGTTAATAATTAAGGTAAATTCGGTTTGTTCCTCACAAATCTCTTTGATGGGTCTAAAAGACTATACGACTATGCATACCAACAGTCCagaacaaacattattttagtcTCTCATtccaaaaaaatgcacacacccACTCGCattcaaaaattacattcacaTGTGATATGGATCACTTTTATGATATTTTCATAGTGCTTTTTTCCCAGTAAACCAATGCATCATTTCCAAATTCTCCTATTTTGTTGCCCAGAagagtaaaataacactaatatgGTTGCGACATCTACTGTACATtgatgtcaaaaataaatacttcatttcattaaatacagtatatcCCAAGAATTAATgatgaattatacattttaaaatgtttaacttgCTCAATTCATAGACTACGATTTATTGTATATCATAAAGAGGGAATGTGATGAAAGGTCCCATAAACTTTTATGGGCTGATCTTACAGCACatgtaatgaataaacaaaccgCTGACTGCAGCATTTTA

Function

symbol description
hykk.2 Predicted to enable amino acid kinase activity. Predicted to act upstream of or within phosphorylation. Predicted to be located in cytoplasm. Orthologous to human HYKK (hydroxylysine kinase).
hykk Enables hydroxylysine kinase activity. Predicted to be involved in lysine catabolic process. Predicted to be located in mitochondrial matrix.

NR:

description
PREDICTED: hydroxylysine kinase

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0047992 hydroxylysine kinase activity molecular_function

KEGG:

id description
K18201 AGPHD1; hydroxylysine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223760.1 True 1866 mRNA 0.44 5 17516130 17520426

Neighbor

gene id symbol gene type direction distance location
dynlt2b tctex1d2,LOC107701222,LOC107732663,LOC107744197,LOC107551376,LOC107565470 coding upstream 23475 17490744 ~ 17492655 (+)
rubcn LOC107720396,LOC107732676,LOC107701215,LOC107568258,LOC107679062,LOC107551360 coding upstream 77216 17422118 ~ 17438914 (+)
rnf13 rnf13,LOC107551383,LOC107568264,LOC106613488 coding upstream 128051 17371155 ~ 17388079 (+)
srfa srfa,LOC107568266,LOC107679061,LOC107720394,LOC107551382,LOC107706117 coding upstream 146233 17353817 ~ 17369897 (+)
dag1 dag1,LOC107592827,LOC107757307,LOC107691879,LOC107564392,LOC107708488,LOC107678152 coding upstream 446163 17040662 ~ 17069967 (+)
LOC122327646 ephb3,LOC107668659,LOC107687281,LOC107732650,LOC107744192 coding downstream 176449 17696875 ~ 17741017 (+)
G153654 LOC103364560,LOC102213549,LOC105896408 non-coding upstream 41530 17473241 ~ 17474600 (+)
G153653 NA non-coding upstream 43284 17471900 ~ 17472846 (+)
G153647 LOC107568254 non-coding upstream 73951 17441873 ~ 17442179 (+)
G153645 NA non-coding upstream 96186 17419724 ~ 17419944 (+)
G153610 NA non-coding upstream 443194 17072514 ~ 17072936 (+)
G153737 NA non-coding downstream 363187 17883613 ~ 17883921 (+)
G153740 NA non-coding downstream 366220 17886646 ~ 17886876 (+)
G153743 NA non-coding downstream 419455 17939881 ~ 17940860 (+)
tsc22d2 tsc22d2,LOC107732673,LOC107679060,LOC107701225,LOC107568259,LOC107720398,LOC107551385 other upstream 96886 17399305 ~ 17419244 (+)
dock3 dock3,LOC107592830,LOC107691882,LOC107567192 other upstream 766202 16600630 ~ 16749928 (+)
G153432 slc6a6b,LOC107567309,LOC107676359,LOC107719944,LOC107562730 other upstream 1016717 16493702 ~ 16499413 (+)
rpl32 rpl32,LOC107691188,LOC107719943,LOC107720357 other upstream 1129954 16317387 ~ 16386176 (+)
LOC122327131 NA other upstream 1344501 16163383 ~ 16171629 (+)
G153741 LOC107661227 other downstream 405925 17926351 ~ 17927244 (+)

Expression


Co-expression Network