tbxa2r (tbxa2r,LOC107744660,LOC107678103,LOC107559829,LOC107562097,LOC107679093,LOC107717168)


Basic Information

Item Value
gene id tbxa2r
gene name tbxa2r,LOC107744660,LOC107678103,LOC107559829,LOC107562097,LOC107679093,LOC107717168
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2282224 ~ 2289327 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223789.1
TAAACGTTCCTGCCCGCTCCGCACTGGCCCTCGAGGCTATCAGAGAGCTTCTGCTGTTGATTTTATCTGTGGAGGTTTCTGGAGGAGATCCAGAGACTCCTCCCGCGGTCGGCGGCGATGAAGGAGGAACGAGGGGGCGCGTGTcccatcatcatcctcctcatcctcctcctcatcctcacaGTCGCGTGTTTCTGAGCGGGGTTGGAGTTCGTTGGCAGGATGGAGGTGATGGGAGGCAGAGCTTGAGATCTCTGGACTCTCTCAGGGATCCGCGGATCGACAGACTCGCCCGACTTTCACACGTTCTCAGGTTCACAGAATGAAATAAACCCGTCTTCAGCAGTCATCGTCATGGTTTCCTCACCGTTTCCTCACATGGATCAAACGTCGGCACCGAGCAACGCGACCCCGCTGTGCTTCTCCATCAACAGCCCTCCTTTCGGATATAACCACACTATCATGTCGGCGTATTACTCAGCGGTCTTCAGCGGCCTGGGCTTGAGCTCCAACCTCTTCGCTATGGTGGTTCTGGCCAAGACCTTCCACCACACCAAGAGCCGCTCGCGCTCCTCCTTCCTGCTCTTCCTCGGCGGGCTGGTCTTCACCGACTTCATGGGTCTGTTGGTCACCGGCTCCATCGTGGTGTCCTTCCACATCACGCACTTCAACTGGCGCCAGCTGGACCCTCATTGCCACTTCTGCAACTTCATGGGCATGTCGATGGTCTTCTACGGCCTCTGCCCGCTCCTTCTCGCCGCCGCGATGGCCATGGAGCGGTTCGTGGGCATCAACCGACCCTTCGCCCGCTCCATGGCCATGTCCAACAGCAGGGCGTGTTCGACGCTGGCCGTGGTTTGGGTCACGGCCGGCTGCATCAGCCTGCTGCCGTTGGCCGGATTGGGAAGCTACCATCTCCAGATCCCAGGGTCCTGGTGCTTCCTCAACATCAGCTCCAAGCCGCTGGACATGACCTTCGGCTTGATCTTCTCGCTCGTGGGTTTGCTGTCGCTGGCCGTGTCGTTCCTGCTCAACACGGTGAGCGTGGTCACCCTGCTGAGGGTGTGTTGCGGGCAGGACAGCGTTCAGCGGAGACGAGACCACGAAGTGGAGATGATGGTGCAGCTGATTCTGATCATGGCCATCGCCTCCGTCTGCTGGTGCCCTCTACTGGTGTTTATCGCGAAGACCGTGCTGTCGGGAAGCGAGCTCAACGTTGGCAGCCTGCTTCTCTGGCTTCGGTTTGCGACGGGGAACCAGGTCCTGGATCCCTGGGTCTACATCTTATTCCGACGTGCCATACTGAAGCGTGTCGCTCCCAGGTTGGACTGGTCCCGCGACTCCATCGTTAGCTTCTACCCCGCCATCTCCACGTCCTTTCGCAAGCTCACTCGCGCATCTCTCGGAGGAACCATTGACCACTTGGATCCCGTCCGGCCGAATCCAGACAAACCCACACAAGAGGACACGCCTCTCCCTGTGCTGGGAGCCACTGCTACGTCTAGCAGCAAAGACTAGCATTTACTTCTTTCTTCATTAACGATTCGAAGTCTAATGTGGCGCCCAACGCAGGGCGCAATCTAATTTTTCTACACTTTTGTTGGTGCGTCGCTTGTCGGAAAGGCCTGGCCAAGAAAGTCTAGTCGGACACGTTCAAGAAGCGTATATTTGAGCTCTCTAGAACTCTCTAGAACTGAATTTGAAAAGCCAAGCTGTTGAGGAAAACGTCCTGTAGAAACTTGAGTGGGAAAGTGGGCGGGGCTTGGTTTTACCCGCTTTTTCAGCAGTGTTTACCGTTCAAGTCTTCTTTAAAGAATTTAACCAAACTATTAATCAAACTAACCTACTACAAGGTGGATCGCAACAACGCAAACTTTTAAGGCAACAAGTATttgaaaatacttaaaaattcaAATTGGATGGAAGGGCAATAATGTGCACTTAatggttttaataataataaaaaaagctttgtttta

Function

symbol description
tbxa2r Enables thromboxane A2 receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in gill; muscle; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in aspirin-induced respiratory disease; asthma; and blood platelet disease. Orthologous to human TBXA2R (thromboxane A2 receptor).

NR:

description
PREDICTED: thromboxane A2 receptor-like

GO:

id name namespace
GO:0038193 thromboxane A2 signaling pathway biological_process
GO:0004961 thromboxane A2 receptor activity molecular_function

KEGG:

id description
K04264 TBXA2R; thromboxane A2 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223789.1 True 1979 mRNA 0.54 3 2282224 2289327

Neighbor

gene id symbol gene type direction distance location
si:zfos-943e10.1 LOC107678111,LOC107717170,LOC107559831,LOC107562095,LOC107679086 coding downstream 12369 2256136 ~ 2269855 (-)
gpr35.1 LOC107717171,LOC107678099,LOC107580869,LOC107678091 coding downstream 26764 2251211 ~ 2255460 (-)
lonp1 lonp1,LOC107744642,LOC107679084,LOC107548847,LOC107678106 coding downstream 50353 2221839 ~ 2231871 (-)
lmnb2 lmnb2,LOC107679080,LOC107678108,LOC107744643,LOC107741802 coding downstream 64591 2206483 ~ 2217633 (-)
ing5a ing5,ing5a,LOC107574595,LOC107678097,LOC107548837,LOC107679074,LOC108424972 coding downstream 126843 2148678 ~ 2155381 (-)
ptprsa ptprd,LOC107559826,LOC107679075 coding upstream 7906 2297233 ~ 2469561 (-)
kdm4b kdm4b,LOC107717157,LOC107742799,LOC107679073,LOC107561592,LOC107549366,LOC107660208,LOC108412081 coding upstream 401299 2690626 ~ 2733830 (-)
uhrf1 uhrf1,LOC107561590 coding upstream 445832 2735159 ~ 2748590 (-)
fbn2b fbn2b,fbn3,LOC107704489,LOC107742800,LOC108441289 coding upstream 495351 2784678 ~ 2849559 (-)
LOC122328226 LOC107549362,LOC107704491,LOC107742801 coding upstream 586731 2876058 ~ 2878821 (-)
G148707 NA non-coding downstream 125407 2156256 ~ 2156817 (-)
G148679 NA non-coding downstream 150044 2129842 ~ 2132180 (-)
LOC122328197 NA non-coding upstream 229110 2518437 ~ 2524302 (-)
LOC122327855 NA non-coding upstream 237767 2527094 ~ 2563223 (-)
G148749 NA non-coding upstream 302245 2591572 ~ 2592729 (-)
G148860 NA non-coding upstream 408786 2698113 ~ 2759687 (-)
G148889 NA non-coding upstream 585084 2874411 ~ 2983937 (-)
gpr35.2 NA other downstream 31663 2244631 ~ 2250561 (-)
LOC122328032 NA other downstream 166041 2114320 ~ 2116183 (-)
G148613 NA other downstream 617597 1661185 ~ 1664627 (-)
G148574 NA other downstream 627884 1643710 ~ 1654340 (-)
LOC122327997 NA other downstream 667686 1583015 ~ 1614538 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other upstream 762073 3051400 ~ 3065177 (-)
dnase1l4.1 zgc:101000,LOC107566350,LOC107712182,LOC107702655 other upstream 934821 3224148 ~ 3232213 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other upstream 966069 3255396 ~ 3273051 (-)
si:rp71-36a1.1 NA other upstream 1036248 3325575 ~ 3366122 (-)
LOC122327341 NA other upstream 1088705 3378032 ~ 3451429 (-)

Expression


Co-expression Network