gpr35.1 (LOC107717171,LOC107678099,LOC107580869,LOC107678091)


Basic Information

Item Value
gene id gpr35.1
gene name LOC107717171,LOC107678099,LOC107580869,LOC107678091
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2251211 ~ 2255460 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223807.1
CGTAACCGTATGCTGTCGTTCACGAGAAGATCGTTCTCTCACTGAGAGGGGGTTCATGTAGTCTGATCGGGAGACTTGCAAACGTTGGCACGTTGCTCTCTTCTTCAGGTCTGGAAAAGGCGATGCAAATCGGTGCGCGATCCGCTGTGTAGAAgctatagagagagagagagtaaaaacGTGTTTGTGTTTGGGACCATCATCAAACGAGTGCAGAGCTTGTGAAAAGGCTGAAGATGTCCAACTGCACCCTCCAAATCTCTTCCACAGTCGAGGAACTGCAAAAAATCACGTCCATTCCCACCTTCATTTTCGGGGTCCTGGGGAACATTTACGTCTTGGTGATGTTCTGCCGCCGTCCTAGAGCAAAATGGACCTACATGAACGTCTACATCACCAACATGTCCATCTCCGACTGCGCTCTGTTGATGTTCCTGCCCGTTAAGATCCATTACTACAGCAGGAAGTTAGAAGAGAACTTGAAGGCGCtgtgtaattttgttttgtggCTCATTTACGTCAACATGTACGTGAGCATCTTCACCATCATGGCCATAAGCGTGGTGCGGTACGTGGCCATCAAGTACCCCATGAAGGCCAGGGTTATGTTCTCTTGCAAGAGCGCTCTGGTGGCTTGCGCGCTCATATGGCTCACCATTTTCTGCGTCAGCCCGGTTTACTTCGTGAAAGACTCCAATAACGACAAGACCATGTGCTTCCAGAGGGTCAAGGGGGCGTTGTCGTTGGATTTCGTTTTATTGTTGGTCATCGTCGGCTTCCTTGTGCCGTTCCTCATCATGCTGTTTTGCTCCGTTACAGTCGTTTGCACTTTAAGGAAACAGCTGGACGTCGGATCGCGTTCGGAGAAGATCCAATGCATGTTCATCATCGTGGCTAATTTAGTTGTTTTCACCGTGTGCTTTCTCCCCATCCACACGGGTTACCTCATTAAACACCTCGTGCAGAACAAGTACGAAAACACAGAAGACGTCGAAAGCTGCAACTATAAACTGTTCGCGCACAACTTCCTGCACATTGCTCTTTGCATTTCCAATATGAACTGCGGCTTGGActgttttagctattttttcgCAACCAAAACGTCCTGGAATATGGGCTGCATGAAGGACGCTAAAGGTAAAGAAGGCGATTACAACGCTGTTTTGGACGCGCCTGGTACGCCTACGTAATTGTTTTGACTGgcttttgttttaacatttgcatCTTTCGTGCATGTTCTATACACTCTGTTCTCATATATAAGGGTTGCATTATTAAACAAGGCTCTCCGTTATCAACAATACACAATGCTAAATACGAATGTATCTTAATCTGTAAAATAACGGGCTGGTAATAAACGCTTATATTTGTACTCTGAA
>XM_043223808.1
AGCAATGCGTGTTTAGAAAGTTAAACGCAAAGTTTATTTAAGAGAGAGCGTTGAGAgcatatttttgccatttaaaactTCAAGAGAGATCTAAGCCCATGTTCTGGCTTTGGTCTTCCAGCCAATGAGGCGAACGCATCATGCAAACTTCGTTTCGCCATTAATTGCATGCGTTACTgattccccaaagaaccttttatCAAATAACTAAGACTTTTCCCTTAGTGTTTCTCGGAATCGCCTGACATAAACTCGCAATCTTGAGATAAAGTGCGGGATATGGACTCTTAGGCGCGGTTTCCTCGGCAGGATTTACATTAAGCCAAGAGGAAAGAGAGCCTTTGGGTTACGAGAGTGATTGTCAGACCTTCAGACACTTAATCGAGGCTTTAGAAACGGCTCAGTGAAACACAATTAAGGAAAACTAACTTTCCAGAAAGCAGGTTTTGTGACATACAATTATACTAATAATTGAAGAAGTATGAGGAAAACTGCTTTCTGTATTGCCCAGGTAATACACTAAAAATGAATCTTTAGTACTTTTTACTGTAGTTCTTTAGTACTGTGCTATTTCGAGAcgccatgaatatgaactaaaatgctcttttaataTGCTGCTTGAGTGTACTATTGTACGAAAGGTggtttcaagtgtgctacaagtggtaaaaaacaaatgtagtgTGTTGAATTTTTAGTCCATATTGATGGTATCTAAAAATAGCACAGTCCAGTAGACTTAGAAGATCTTTATCTAATTTGAATGGCAGGTCAAATAAGTGCTTCGCATAATCTGATGtagctgtgtttaaaatcaaATGGGAAATTAAGTTTTGGGCGTCCCTCCAAAGGAGAACTGGACCCAAATGACTCCGGTTTCTCCCAAGGGTTTtgttctccattctgtatggatggggttttggttccttgccgctgtcgcctctgatttgcttagttggggacacttaacttctagcgattatcgtctgCATTTAACAACAAATTAAGTTCTTAATCTTATCATCATACACAACTATGACTCTATTCTCCCGTTTGATGCTGTTCAGTGCTTCGATACAGTCTTTGTTGTTAAAAGCTGTACATAAATAAAACGTGACCGATGTGGCCTCACTTATGACTTTACACAAGCAGCAGGAATGAATTCGAAATTTTCCACATTGGCAATCCTGGGTTTGGCTCGTAAACCAGAAGCGCTCTCAGTGGTTTGAAGAATATCAGCTCCTTCGACATCGGAGATCTTCCTATGGAGCTGCGAGGAGAACGAGCTTCGAGAGAATCTCTCTTCTGAACGGGTGGTGTTTTGAGGTCGCAGCAGGACGGAACAGGGAAGCAACAGCTGCGGCTGCTTTCAGTGGTGCTGGGAATAATGTGCCGCCGATTATCTTCGAGGGAATGAGGCGAGGAGAATGGCTTTGTGGCTCGGTGAGGGTTTCAGACATTCAGAATTCCTCCAGTTTACGAGAAACCACAATGCGGAGGGCGTGCTGCCCATGCACTCCAGCCAGCAGACAAAGCCTTCTTCAAAGAGTCTCGAGTATCACTGGGGTGAAGCtgtgaaatggaaaagaaaatggAGCCACCTATCTGCTGGCGTGAGATTGCCTGAGCGATTAAACTACAGATGCCTTTCCATCCCTGTTCGACAGAGGAAGATGAAGAAAGCCAGGGCCAAACTTCAAACGTACAACATCGCCAACGGGCGACATCTTGCTTATGCAAAAAATGATAGAGTCTCATCAGCGAGATGTGAAAGGCTTCCAGGCTGCGAACAAACCTACGGAGATCAGAAATGAATATTCTTCAGGCTGAAGATGTCCAACTGCACCCTCCAAATCTCTTCCACAGTCGAGGAACTGCAAAAAATCACGTCCATTCCCACCTTCATTTTCGGGGTCCTGGGGAACATTTACGTCTTGGTGATGTTCTGCCGCCGTCCTAGAGCAAAATGGACCTACATGAACGTCTACATCACCAACATGTCCATCTCCGACTGCGCTCTGTTGATGTTCCTGCCCGTTAAGATCCATTACTACAGCAGGAAGTTAGAAGAGAACTTGAAGGCGCtgtgtaattttgttttgtggCTCATTTACGTCAACATGTACGTGAGCATCTTCACCATCATGGCCATAAGCGTGGTGCGGTACGTGGCCATCAAGTACCCCATGAAGGCCAGGGTTATGTTCTCTTGCAAGAGCGCTCTGGTGGCTTGCGCGCTCATATGGCTCACCATTTTCTGCGTCAGCCCGGTTTACTTCGTGAAAGACTCCAATAACGACAAGACCATGTGCTTCCAGAGGGTCAAGGGGGCGTTGTCGTTGGATTTCGTTTTATTGTTGGTCATCGTCGGCTTCCTTGTGCCGTTCCTCATCATGCTGTTTTGCTCCGTTACAGTCGTTTGCACTTTAAGGAAACAGCTGGACGTCGGATCGCGTTCGGAGAAGATCCAATGCATGTTCATCATCGTGGCTAATTTAGTTGTTTTCACCGTGTGCTTTCTCCCCATCCACACGGGTTACCTCATTAAACACCTCGTGCAGAACAAGTACGAAAACACAGAAGACGTCGAAAGCTGCAACTATAAACTGTTCGCGCACAACTTCCTGCACATTGCTCTTTGCATTTCCAATATGAACTGCGGCTTGGActgttttagctattttttcgCAACCAAAACGTCCTGGAATATGGGCTGCATGAAGGACGCTAAAGGTAAAGAAGGCGATTACAACGCTGTTTTGGACGCGCCTGGTACGCCTACGTAATTGTTTTGACTGgcttttgttttaacatttgcatCTTTCGTGCATGTTCTATACACTCTGTTCTCATATATAAGGGTTGCATTATTAAACAAGGCTCTCCGTTATCAACAATACACAATGCTAAATACGAATGTATCTTAATCTGTAAAATAACGGGCTGGTAATAAACGCTTATATTTGTACTCTGAA

Function

NR:

description
PREDICTED: G-protein coupled receptor 55-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223807.1 False 1379 mRNA 0.46 2 2251211 2255460
XM_043223808.1 True 2975 mRNA 0.44 2 2251211 2255199

Neighbor

gene id symbol gene type direction distance location
lonp1 lonp1,LOC107744642,LOC107679084,LOC107548847,LOC107678106 coding downstream 19340 2221839 ~ 2231871 (-)
lmnb2 lmnb2,LOC107679080,LOC107678108,LOC107744643,LOC107741802 coding downstream 33578 2206483 ~ 2217633 (-)
ing5a ing5,ing5a,LOC107574595,LOC107678097,LOC107548837,LOC107679074,LOC108424972 coding downstream 95830 2148678 ~ 2155381 (-)
pigx NA coding downstream 104711 2143038 ~ 2146500 (-)
pak2b pak2b,pak2,LOC107741800,LOC107678112,LOC107679089 coding downstream 108848 2132741 ~ 2142363 (-)
si:zfos-943e10.1 LOC107678111,LOC107717170,LOC107559831,LOC107562095,LOC107679086 coding upstream 676 2256136 ~ 2269855 (-)
tbxa2r tbxa2r,LOC107744660,LOC107678103,LOC107559829,LOC107562097,LOC107679093,LOC107717168 coding upstream 26764 2282224 ~ 2289327 (-)
ptprsa ptprd,LOC107559826,LOC107679075 coding upstream 41773 2297233 ~ 2469561 (-)
kdm4b kdm4b,LOC107717157,LOC107742799,LOC107679073,LOC107561592,LOC107549366,LOC107660208,LOC108412081 coding upstream 435166 2690626 ~ 2733830 (-)
uhrf1 uhrf1,LOC107561590 coding upstream 479699 2735159 ~ 2748590 (-)
G148707 NA non-coding downstream 94394 2156256 ~ 2156817 (-)
G148679 NA non-coding downstream 119031 2129842 ~ 2132180 (-)
LOC122328197 NA non-coding upstream 262977 2518437 ~ 2524302 (-)
LOC122327855 NA non-coding upstream 271634 2527094 ~ 2563223 (-)
G148749 NA non-coding upstream 336112 2591572 ~ 2592729 (-)
G148860 NA non-coding upstream 442653 2698113 ~ 2759687 (-)
G148889 NA non-coding upstream 618951 2874411 ~ 2983937 (-)
gpr35.2 NA other downstream 650 2244631 ~ 2250561 (-)
LOC122328032 NA other downstream 135028 2114320 ~ 2116183 (-)
G148613 NA other downstream 586584 1661185 ~ 1664627 (-)
G148574 NA other downstream 596871 1643710 ~ 1654340 (-)
LOC122327995 NA other downstream 625304 1580290 ~ 1625907 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other upstream 795940 3051400 ~ 3065177 (-)
dnase1l4.1 zgc:101000,LOC107566350,LOC107712182,LOC107702655 other upstream 968688 3224148 ~ 3232213 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other upstream 999936 3255396 ~ 3273051 (-)
si:rp71-36a1.1 NA other upstream 1070115 3325575 ~ 3366122 (-)
LOC122327341 NA other upstream 1122572 3378032 ~ 3451429 (-)

Expression


Co-expression Network