LOC122328100


Basic Information

Item Value
gene id LOC122328100
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2112781 ~ 2114243 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223812.1
TCAGCGGAACGACTGAGACAGCACCAGAGGATCCACtctggagagaaaccttacaagtgttcacactgcGACAAGAGATTCAATCGGTCAGAAAACCTGAAAACACATGTGAGAACTCACAGAGAGAAACCATACAcgtgtgatcagtgcgggaagagttttgCACAAAAAGGACACCTTACTGCGCATCTGACCGGTCATACGGGAGAGAGACCGTTCACATGTgttcagtgtggaaagagttttgcaCAAATAAGAATCCTTAAGAAACACATAAACATCCACACCGGAGTGAAACCGTTCAcatgtgatcagtgcgggaagagtttcacaCATTCATCGCAACTGAAGAGACACATGACCATCCACACCGAAGAGAAACCGCATACGTGCGATCAGTGCGGAAGAATATTTTTGAGGGATTCGTACCTGAAGAAACACCTGAAAGTTCATTCAGAAGAGAAACCACATTCATGTTCTTTCTGTGGAAAGAGATTTTTACTGCTGCAAAGTTTAAAACTGCATCAGAAGATACACACTGGTGTGAGAGATTACATTGAGCGTGAAGAGACTTTTATTATAGCTGAACAACTGAGACGGCACCAgaggatccacactggagagaaaccatacaagtgttcacactgcGACAAGAGATTCAGCCAGTCagaaaatctgaaaacacacgagagaacccacaccggagagaaaccatacaagtgttcacactgtggCAAGGGATTCAATCGGTCAGAATATCTGAAAATgcacatgaggatccacaccggagagaaaccttacTCGTGTGATCAGTGTGGCATGTGTTTTACACAAAAAGGAAACCTTACTGTGCATCAGGCTGTTCATACGGGAGAGAAACCATTCACTTGTGATCAATGTGGAAACAGTTTTGCACAGTTAAGAGTCCTTAAGAAACACATGAACATTCACACGGGAGACAAACTGTTCACATGTGAtgagtgcgggaagagtttcacaCAACAAGGATTCCTTACCATGCACATGAACATCCACACTCGAGAAAAGCTGCACATATGCGATCTCTGTGGAAAGGCATTTTTGTGGGCTACGAACCTGAAGAATCATCTGACCGTTCATTCAAAGGAGAAACCGCATTCATGTTCTGTGTGTGGAAAGAGCTTTTCACGGCTGGATAATTTAAAAGCCCATCAGAAGATACACACTGGGGTGAAAGAATACATGTGCTTTGAGTGTGAGAAGACTTTTATTACAGCTAAAGAATTAAAACGGCACCAGAtgattcacactggagagaaaccttacaagtgttcacactgcGACAAGAGATTCAGACAGTTAGGAACTATGAAAAGGCATGAGATGATCCACACCAGAGAGAAACCTTAAATGTGATCgatgtgaaaacatttttgagggATTTAGTCCCAAAGAAGCACATTAAAGTTCGTTGAAAAATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223812.1 True 1461 mRNA 0.43 2 2112781 2114243

Neighbor

gene id symbol gene type direction distance location
LOC122328124 NA coding downstream 149554 1959836 ~ 1963227 (-)
ampd2a ampd2a,LOC107571172,LOC107662820,LOC107711379 coding downstream 184075 1915392 ~ 1928706 (-)
LOC122327919 LOC107574663 coding downstream 246825 1570476 ~ 1865956 (-)
LOC122327910 NA coding downstream 314096 1699898 ~ 1798685 (-)
trnag-gcc_102 NA coding downstream 679266 1433445 ~ 1433515 (-)
LOC122327992 NA coding upstream 6346 2120589 ~ 2123969 (-)
aqp12 NA coding upstream 10347 2124590 ~ 2128965 (-)
trnai-aau_113 NA coding upstream 13619 2127862 ~ 2127935 (-)
pak2b pak2b,pak2,LOC107741800,LOC107678112,LOC107679089 coding upstream 18498 2132741 ~ 2142363 (-)
pigx NA coding upstream 28795 2143038 ~ 2146500 (-)
G148687 NA non-coding downstream 13844 2098217 ~ 2098937 (-)
G148517 si:dkey-27n6.1,LOC107573273,LOC107674416,LOC107575994,LOC107566706,LOC568664,LOC107745441,LOC107578212,LOC107574308,LOC107563973,LOC107749583 non-coding downstream 134921 1284070 ~ 1977860 (-)
G148663 NA non-coding downstream 154688 1952937 ~ 1958093 (-)
G148632 LOC106565674,LOC106583071 non-coding downstream 205034 1809065 ~ 1907747 (-)
G148630 irf6,LOC107698281,LOC107599105,LOC107662833 non-coding downstream 206852 1808166 ~ 1905929 (-)
LOC122327838 NA non-coding upstream 15288 2129531 ~ 2132683 (-)
G148679 NA non-coding upstream 15599 2129842 ~ 2132180 (-)
trnai-aau_114 NA non-coding upstream 16380 2130623 ~ 2130696 (-)
trnad-guc_17 NA non-coding upstream 16644 2130887 ~ 2130958 (-)
trnag-gcc_103 NA non-coding upstream 16970 2131213 ~ 2131283 (-)
G148613 NA other downstream 448154 1661185 ~ 1664627 (-)
G148574 NA other downstream 458441 1643710 ~ 1654340 (-)
LOC122327995 NA other downstream 486874 1580290 ~ 1625907 (-)
LOC122327997 NA other downstream 498243 1583015 ~ 1614538 (-)
G148573 NA other downstream 649605 1461873 ~ 1463176 (-)
LOC122328032 NA other upstream 77 2114320 ~ 2116183 (-)
gpr35.2 NA other upstream 130388 2244631 ~ 2250561 (-)
LOC122327369 LOC107566359,LOC107727552,LOC107702633,LOC107698598,LOC107549380,LOC107733351,LOC107733325,LOC107566366,LOC107727554 other upstream 937157 3051400 ~ 3065177 (-)
dnase1l4.1 zgc:101000,LOC107566350,LOC107712182,LOC107702655 other upstream 1109905 3224148 ~ 3232213 (-)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462,LOC107712190 other upstream 1141153 3255396 ~ 3273051 (-)

Expression


Co-expression Network