gpr52 (gpr52,LOC107599442,LOC107715120,LOC107655251,LOC107592687,LOC107728559,LOC107669811)


Basic Information

Item Value
gene id gpr52
gene name gpr52,LOC107599442,LOC107715120,LOC107655251,LOC107592687,LOC107728559,LOC107669811
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 9309806 ~ 9317007 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223821.1
TCAGCCTCCTATGACATTACACATTACGCTGCTTACAGTTTCATTTTTAGAATAGGATTCTGTGATTCTGTCCACGAAGTGTATGCTGGTGAGCTACCATTTTCCCAGCGTATGAGATGTTTGAGACTTGTCCACAAAGCCATCCCAGTTTTCTTCGACCAGCTGCCCCTCCCTCACAATAGCCCCCTGTTCCCAGCACAGCCCGACATGTATCTTAATGCGGTCAACATCTAGCGACTGAGCTGCCATTCACTCTGAACTATAATGCTTCTATTAGCGGCCTCATCATACGCCCGTTCCGCCTCCCCGAGAATCAATAACCCGCAAACAACGTGATTTCTTTCTTGCCACGACACTCGCCAACGAGAGAGCCTTTTGTACACATGCCTTGTTTTATGGCGTTGGAATGTTGGAATAGATTTTGGCCCCCGTCTGCACTGCGGAGTAGATGGGGTCGGCTCTCTCATAGCGTGTGCTATCAGACTGTGTCGTTGGGGTCAGCTCGTCGCTGACACAGAAATGACAGTTTGTATTACCGAGAGACACACTTCATGCAGTCATATCCTCTTTTTATGTGTGCAGAGGTTTGAATCACGAATACATGCATGCCTTGGGACTGCCTGCaagttgtttatataaaattgaaaacaCAAAACCTTGCTATGATTGTTACGTTGATGTGGTTATGAAGCATAAGCGAACTTTCAGTCTCAGTTTAATGATGGTATTTTACTTAAATctctttttaattcatataaaaagtaAGCTTGGACGTTCCAGTACATTTCAGTGTATACTGTTatcttatgtattttatatttatatgtgtgcatatttcGTTTTCCACCTTTTACAGATTCACTTAGACATTCACTTATTAATTGTGCACCTTAAGACCAgggcatttattaaaataaagttatgaCGTAAATAGGTTCCAATCTGATTTCATGTTATCTTTGAAGGCAGCGGATTTAGCAAAGCCCTGACTGTTGCCGTAAATAATGCCAAATCAAGTCCAGCTGTCATCCTGACCTGTACTTGTACTGCCAGTGCAGTGATGAGAGCCAGAGTGCCCTGCCTGTCCCTGTACAGAGTCACTTGGATCAAAAGCTCAGGCACCGACAGATGAAGAGGATTATGGTCATTGTTTTCTCCAACCTTTTCTCTTCCTTTGTGATGAATCATTTATACGGGCCTCTGGCTGACACTGTTGTTCAGTAGTATCTTGTTCCAAGTTATGGATCAATGTTTTTTATACATATCACCCACTGTTTTTACTGCAGAATTCAGTTTTCATTTGGCCTAATATCATGCTATATTATAACCAGTTGAACCTATTTTGTATGGTTTTCTTTGTTTGAAAAAttgtattatgaaaaaaattgcattgtcGGTTAAAGGCAACCAGTCTTATGTTTTGTGaatttttctgcttttgaatgttagaaAAGTAAGGGtcattatttaagtttttttttgcacacaaaaagtgttcatcaaattacagttgaaccactgattattttaataatttccttACTATTTTTCTGGATGCTGCTGTCTATGCAGTGTCAAAAAGCTATTGAATTTAATCAAAGATATCTTAACATCTGTTCTCAAGATGAATGAATgtcttactggtttggaactacatgagggtgagtaattaatgacagaattttttacatttctgtttaaaatattaattgtaaaaattattatcttaCCTGTTtgtaaattagattttagattACCTGTTCATAGTACTTTGTGTTCCTGCAGCCCAGATGGGATATCAAATTTAGTCATTCCCAAGCTCAGGCCTAGGACAACAATTACAGTTGCCCACCGCCCTTTTTTGGCATCCCTGCTAGCAACAGCAAGGTTGTGGGTTCAATATGGTCTTGCGGCAATGGAGGGATGCTAACAGATAGCTTTCTCTGGGAATTATAGACCTCCTTGTGTACAGTCAGTAAGGACAAAGTTGCGCAAGTGTTATCTGTttattgtctctttttttccaggCACCCTTTTTTGTCATCACATTCAGTTCAGGACTGCAAGCTCACCACTCAgctaaaatatgaaattgtttCGCCACGGGGCTTGAACATTCAGCGGCAGTGCAGCTGTGCAGGAAACATTGGCTGTCATTCTCGTAATCCCTTTGTATTTTATGAGCTCCTCTAGTTGTAATTATGTCTAGCAAACTTGTCAGTAAAACTGGTGAAGATCTGCATTTCTGATTGTGTTATAGCAGACTCGGGCGATAATATCCTTCCAGGGGAATGAAACCCCCCTCTCCCGTAGTCTCTTAATTTGTTCCTGTTTGTTGCACCATGTCAGCTGTTGTGAGGGAGGGTCCTGGCTAACTGAAATGCCTGGCAACTGTAACCAAGGGGCAGGCATTGCTGTGCTTGGGCACTGGTCTGTGTAAGTGACTTGAAGCAGGAAAGAAAACGAGAGCGAggaataataaaacactgagcTGTAGGAGACAACGGGAGAGATGGAAGtctttgattatttttgaatgGGGAAACATCTTCAGGGTGTGCAGGAAGAAGAGGATAATGAGAAAAGCGGGAGAACATTGGAAGgaaagagagggggagagggagagagagagagagagagagaacagtgtGCTGGGAGGAGTTGTGTGAGAAAGAGGACCTCAGGTGCCGCCAAAAGGGGGAGGGAGGAGAGttagagagcgagcgagagcgggagagagaggggaaggaAGCAGGGAGCGAATGTGATCGAGAGGCACAGTGGAAGAGAGAGCGAGACTGTGAAGGGGGAGAGAAAACTGTGAGCCACTCACAGCATCTCTGAGCACCAGCAGTGAGGGGCTGCTCTCTTTTCCATGGCTTGTTTCTGATTTGCCGCACAATTTGGAATAGTCTAGCTGTTCTCATCTTTTTGCTTGAATTCTTGATTTCAAAGTGCGTTTTGCACTGTGCACGCTCGGTGGGAGTCGCTGTCAACCTGCTTTGGCTCACAGGTCGCTGAGAGCTGACAAGGACAGAAGCGGTACGTAGAGCTTCCAATTTGGGAAACGGACTGAGTATTTCTGTGGACACTTTATGGAATGTGTCACAAAGAAGTTGGAGAAGAAGCAAAGAGGTCTACTCCAGAAGGAAAGAAGCTGGGCATGTACAACTAATTGCATGCAGAGGTTGGACTAAATGTTGGACTGAAACAAAGGACATGTGGATTTAAGACCTGTCCACATGCGATCAGAGGGGACTTCTTCACATAAGCAGCTATATACCTGTTTTGGAAAACACAGGTCAATCCTTTTTTACGTGACCTGCTTTTATCCCATGCACAGTGAATGTTCATGAAAAGTAAACGGATTGGCAGCAAATAAGACCAAAGCCGTCACTGTGGCCCCCCAGAACACGATCTTGAAATTTTGATTAGTTCCGTTTTGCCTCACTCAGACTCCCGCAGGCTATGAGCGGTGCTCTGTGCAGCGATAGCTCTGGAAACTCTCATACGCTGTTCTGTGTTTGTCTAGAGTGTCTGTGTTTTGATTTGGACTATAGAAACCCGAAGGGGGTCGAGACAGTGGCCAAGAGGACAGTATTCCAGAAGCAAAACATGGTGCATGTTATTGTTTGCTGACAAACTAATAGGAACAGATATTTTGGAGACTTTTGCAACTCTTACTATTAAATTTTTGTGGACTCAGGAGAAGCCCCTTCTACAGTCCTGCTCATTTTACCCTTGAGAGGACCGCTTAAGGAATTGGTTGACTTCGCTGCAGGTGCTGTGGACAATATTGCCAACTGGCCTTCAGCACAGATATGCAACCCTTTTGTTTCCAGCAGCCGTAGTTTTGTGTGCTGAGAAAATATCTCTCCATCTTACAATTACTCCTAAGCATGACTGATTTCAGAGTACAAGGcaccttttttcctttttttcacgGACTGTATTGATTTTTGCCAATGCTCAATTCATTGAGATCCAGTCATGTGAAAGACCGAGGTAAAAGGGAAAAGACAGAAGATTGAGATTGAGGAAGCGGGATCACATTGCAGGCCTTCTGCACTGCATTTCAGACAACGGAACCTTATCCAAGTGGACAAGGTTCGGGACAAGGTTCAGGACAATGAACCGGTCGGAGCTGATCGAACTGGTCCCTACTGTGAACAGCAGCATTAGTGGTCATTTTGGTGTGTCCCTAAACCACTCCTGCCCCCTAGGCTGGGGGCAGAACAAGGTCGTGGAAGCTTGCGTCTTAGAGACTGCGGTCATTGTATTGCTGACGGTGCTCATCATTGCTGGGAATTTAACAGTGATCTTTGTATTTCATTGTGCCCCGTTGTTACACCACTACACCACCAGTTACTTTATCCAGACTATGGCCTACGCGGATCTCCTGGTGGGGCTGAGTTGCCTGGTTCCCACCCTTTCCCTGCTCCATTACCCGGCTGGTGTCCAAGAGCCCCTCACCTGTCAGGTGTTCAGCTACGTCATCTCTGTACTCAAGAGCGTTTCGATGGCTTGTTTGGCTTGCATTAGCGTGGACCGCTATTTGGCTATTACCAAGCCACTCTCCTATAACCAACTAGTAACTCCATGCCGCCTCCGCTGCTGCATCGTTCTCATATGGATCTACTCTTGCGTGGTGTTTCTCCCGTCTTTCTTTGGCTGGGGCAAGCCGGGGTACCATGGGGATATCTTCGAATGGTGTGCCCACTCTTGGCCCACTTCTGCACTCTTCACTGGCTTTGTTGTGTGCCTGCTGTACGCCCCTGCAGCCCTGGTGGTCTGTTTCACCTACTTCCACATTTTCCGCATCTGCCAACAGCACAACCGAGAGATCAGCGAGCGACGGGCGCGCTTTCCCAGCCAGGAGATGGAAACCGCCGAAGGGGGCAACCATGCAGGCCACGGGCCAGACCGGAGGTATGCCATGGTACTCTTCCGGATCACCAGTGTTTTTTACATGCTTTGGCTCCCCTACATTTTTTACTTCCTCCTGGAGAGCTCCCATGTGCTGGACAGCCCTGCCCTCTCCTTTGTGACCACCTGGTTAGCAATTAGCAACAGCTTCTGCAACTGCGTCATTTATAGCCTGTCCAACAGCGTATTCAGGCTGGGGATGCGCAGACTCTCACAGACGCTCTGCTCCTCCTGCTCTTTCAGCCCCTGCACTCACGATGACAAGGACTTTGGAGAGCCAAAGCCACGAAAGAGAGCCAACTCCTGCTCCATCTGAAGAACTCGAAGGGTTGCTTGGATTAGTCACACGCTGCTAGGTGTTGTCGCAATGGATTTTAATGTAATTGGTCACTAGAAGAAACTACCAACAGTGAGGATGATAAAGTTTGTGTAATAGTCATGTGATCTACATTcttgtgtaaatattaaaatagcaccTTCCTTGGTCCTGTAAATACCACAGAATGGTCACTGGCCACAACTTATTTGACCGCCTAGAGATATATGCAGTTTTTAGAGCGtttgtgagcaaaaaaaaaagccaagggGTGGGTTCAAAGCTCTCGCTTGTGATGGCTCTTTCCAAATATAGAGCACACTTGTTATTTTTAGAGACATTTACCCATGTTGCTGGATTGgttgttttgatgtttgttgAATTAGTTTTGTGTCGCAGCtgttactgtaaaaacagtTGCTTTACAAAATGATGAGAGCTAAAAGATAGCTGGGCCTTCTCCTAGTGGCTTTTATGGTACAGTGTATCTTGAATAATCACAGGCAATTCACGTCAGAAGCGATGTAGCAAAGAACAAACAGCTtggtctgtgtttattttttcaaaattttcatTCTAGATCTGATCTTTTTGTAGAAAATCTTGAAATGCCACATGCGCACAATATCAACAAATGCCTGTAATAGTTGTGGACTGTAGTTTAGATCCCCGGTGGTGTAAAGCCTTAGCTGTTTGTAATTAGACCTATTTGCCTGCAGTGACCCTTTGAGAAACATGCAACacagcatgttttattttgtaattcatatttttgccaGATCAGCTTTAACTTAACTTGACGTTCATATTACCTTAAGCTgagctttttttctctcactttaATTGTATGAATGTCCCAacgattttctttttattagtcTTCAAATTACATTTTCGTTGCTATTCAGTTTATTTCTCACAAAGAgatgttgtttaattaatttatttttatatttttttaatgagttttaaaaagttgatgcaaaaatataattgtttttcgatttaaaatgcatgtaaattgtacaaattattttttaaataccccAAAATGACGTACACAaattttgttttcctttattttgttCTAGTTTATACATTCCAATTAATACATCCCAGTTATTTTCCAAAGATTAATTGATTTTGTGCACAGTTGTTTTACTGCCTCAATATATTTCTTGGCATCTTCTACAGTgagtatttttatgttgttatgcATCAGCCATTATTTTTCTAACAAAACAGAGAATACAATATATGGCTGCTTCTTTTTGAATTATAATACCTGGGTATTTTTTGGGGGGCAGAGTTAAACTCATTGCTTGAGTCTAGTATATTGGTAGTTTAGTAAGGAACTGCTTTTTGTTGAAgattttgttagtttgtttatgCCTGTAAACTTTATTTGCTGATGGTTGTTACAGCCCTGTACATGCTGAACTTCACAGctcaaaaagaaaatcacaataCAACAACTAGGCTAGTTGATGTGCATTAGataatgaagaaaagaaaaaagatagacTCACtttctttcaaattaaatgGTGAGggtgttctttttttaataacacattaaagagtaaattgactatttatttatttatttttcaatggaTATGAAACTGATAAAATAGCAGTATATTCCTGTATTCATTCTGCTGATGACTCTATAATGTCTCTgtccatttttttgttctttattagGAGAATAAAagagcataaaaatacaatatataaatatatctatttttttagtTCGGagacttttgtttgtttgtttttgtgagacTTTGTTTTTTGCTGTTGCTGCCAGTACAATAAATGTGAACAgt

Function

symbol description
gpr52 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human GPR52 (G protein-coupled receptor 52).

NR:

description
PREDICTED: probable G-protein coupled receptor 52

GO: NA

KEGG:

id description
K08407 GPR52; G protein-coupled receptor 52

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223821.1 True 7077 mRNA 0.42 2 9309806 9317007

Neighbor

gene id symbol gene type direction distance location
fam163ab LOC107728553,LOC107592741,LOC107669804 coding upstream 27964 9272754 ~ 9281842 (+)
tdrd5 LOC107669834,LOC107728589,LOC107592689,LOC107715068,LOC107653580,LOC107576589 coding upstream 39671 9260762 ~ 9270135 (+)
axdnd1 axdnd1,LOC107669794,LOC107653552,LOC107728533,LOC107578687 coding upstream 52544 9248687 ~ 9257262 (+)
nrd1b nrd1b,LOC107669832,LOC107592727,LOC107728531 coding upstream 61772 9236099 ~ 9248034 (+)
rab3b rab3b,LOC107592692,LOC107653655,LOC107669838,LOC108429523,LOC103027359,LOC108270584,LOC105904424 coding upstream 74576 9228408 ~ 9235230 (+)
rab11ba rab11b,LOC107599444,LOC107592688,LOC107655249,LOC108429533,LOC102310619 coding downstream 132282 9449289 ~ 9454347 (+)
hnrnpm hnrnpm,LOC107599446,LOC107728570,LOC107592680 coding downstream 148501 9465508 ~ 9472502 (+)
polr2eb polr2e,polr2eb,LOC107669821,LOC107599482 coding downstream 186543 9503550 ~ 9506291 (+)
tm6sf2b tm6sf2,LOC107599483,LOC107719666 coding downstream 285443 9602450 ~ 9612501 (+)
hapln4 hapln4,LOC107728536,LOC107599484,LOC107719665,LOC107687742,LOC107554801 coding downstream 296872 9613879 ~ 9619115 (+)
G151163 NA non-coding upstream 26802 9277690 ~ 9283004 (+)
G150983 NA non-coding upstream 162418 9145211 ~ 9147388 (+)
LOC122327612 NA non-coding upstream 238634 9068732 ~ 9071172 (+)
G150970 NA non-coding upstream 279896 9025901 ~ 9029910 (+)
G150969 NA non-coding upstream 295954 9013534 ~ 9013852 (+)
G151178 NA non-coding downstream 43421 9360428 ~ 9365322 (+)
G151194 NA non-coding downstream 155979 9472986 ~ 9475031 (+)
G151210 LOC107669820,LOC107592722,LOC107655244,LOC107599472 non-coding downstream 197733 9514740 ~ 9515568 (+)
G151294 NA non-coding downstream 283549 9600556 ~ 9667133 (+)
G151308 NA non-coding downstream 445147 9762154 ~ 9762419 (+)
G150965 NA other upstream 321115 8988186 ~ 8988691 (+)
G150946 NA other upstream 387839 8921698 ~ 8921967 (+)
G150945 NA other upstream 390026 8919279 ~ 8919780 (+)
G150940 NA other upstream 407495 8901143 ~ 8902311 (+)
pdzk1ip1 NA other upstream 417607 8890622 ~ 8892199 (+)
march2 march2,LOC107728591,LOC107669840,LOC107655247,LOC107592682,LOC107599445 other downstream 137831 9454838 ~ 9530165 (+)
G151232 NA other downstream 260672 9577679 ~ 9580151 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other downstream 571156 9888163 ~ 9893507 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other downstream 578434 9895441 ~ 9910793 (+)
LOC122328159 NA other downstream 606540 9923547 ~ 9963634 (+)

Expression


Co-expression Network