G15298


Basic Information

Item Value
gene id G15298
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4040302 ~ 4040753 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17094
ATCTAATTGTAATAATACAGGAAATACAAAGCTCTGTCATGAAACTCTAGATGGCACAGGCTGATAGGTCCTTAATTCAATCTGCTTGCAATCACATCATTATCTATAGGGCACAGCTGATTGGTTCCTGCTGTATCAGTAGCCAATGAGCTCACTTCACAACCTTCAAATACTTGGTCAGCATTGCTGTAGCAGTTGCAGCGCACTTTCAGAAACCCTCCACCTTCCCCAGCTCCACCTGTATAGATCTTCTGCATGTGCAATTAAATATCCATTACTGGCAATATAATACAATAAAATCTCTAATATCAGCCAGCATTTAATAGTACTGGATCATGCATCCAAAATTTGGGGGTCAGTAAGATTTGTTTTGTTTTTGATTTTTTTAAAGAAAGAAATTAATTATTTTATTTAGTAAAAACACATTAAACTGACAAAAAGTGGCAGTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17094 True 452 lncRNA 0.36 1 4040302 4040753

Neighbor

gene id symbol gene type direction distance location
CI01000001_03983212_04011240 NA coding upstream 28706 3983128 ~ 4011596 (+)
CI01000001_03867875_03890850 NA coding upstream 149313 3867840 ~ 3890989 (+)
CI01000001_03865986_03866675 NA coding upstream 173150 3865357 ~ 3867469 (+)
CI01000001_03830254_03833027 NA coding upstream 207275 3830254 ~ 3833027 (+)
CI01000001_03821989_03823336 SLC48A1A coding upstream 216718 3821989 ~ 3823584 (+)
CI01000001_04085864_04225894 PLXNA2 coding downstream 45111 4085864 ~ 4225894 (+)
CI01000001_04296723_04300348 NA coding downstream 255848 4296601 ~ 4300975 (+)
CI01000001_04311013_04315588 NA coding downstream 270260 4311013 ~ 4315765 (+)
CI01000001_04328211_04330988 NA coding downstream 286823 4327576 ~ 4331052 (+)
CI01000001_04369131_04373697 SNPHB, SNPH coding downstream 328378 4369131 ~ 4373972 (+)
G15245 NA non-coding upstream 58648 3981451 ~ 3981654 (+)
G15239 NA non-coding upstream 62451 3977041 ~ 3977851 (+)
G15225 NA non-coding upstream 87385 3952372 ~ 3952917 (+)
G15208 NA non-coding upstream 100622 3938659 ~ 3939680 (+)
G15202 NA non-coding upstream 105467 3934572 ~ 3934835 (+)
G15287 NA non-coding downstream 59369 4100122 ~ 4133524 (+)
G15313 NA non-coding downstream 63056 4103809 ~ 4109360 (+)
G15288 NA non-coding downstream 199798 4240551 ~ 4273985 (+)
G15338 NA non-coding downstream 303135 4343888 ~ 4348581 (+)
G15360 NA non-coding downstream 315463 4356216 ~ 4356616 (+)
CI01000001_03618075_03620436 NA other upstream 418851 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 2369298 1667762 ~ 1671167 (+)
G13051 NA other upstream 2995150 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 3548245 483853 ~ 488825 (+)
G12614 NA other upstream 3729361 309144 ~ 310941 (+)
G15794 NA other downstream 1020465 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 1245996 5279837 ~ 5287698 (+)
G15995 NA other downstream 1671132 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 3491819 7531541 ~ 7540586 (+)
G17234 NA other downstream 3991371 8032124 ~ 8032483 (+)

Expression


Co-expression Network