LOC122328132 (LOC107570673,LOC107575767)


Basic Information

Item Value
gene id LOC122328132
gene name LOC107570673,LOC107575767
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3744546 ~ 3747804 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223842.1
AAACTGAGCACGAGAGACAATGAAATCAAAGAGTTACAGCAGAAGATCAAGATGCTGGTTCCAGAGGGTGTGAAGCTGAATCTGGTTGTGTGTGGGAGTAACAATGAATTAAAATCCTTCATATCAAACCTGATCCTGAATCAGAGCGAGGAGAGATCCGAGTGTGCGAGGAGAGACGTGGAGCTTCACGGACGTCTGATCAGTCTGGTGGAGCTTCCAGCTCTGTTCAGCACTCAGCTCTCAGAGGAGGAAGTGATGCGCCAGACTCACCgctgtgtgtctctctttcaTCCTGGAGTTCATGCTTTCCTCCTCGCTCTTCCTGATGGTCCAATCAATAATGAAGATAAAGCAGAAACCGAGAGGATCCAGAGGATCTTCAGCTCAGAAATCAACAAGCACATCATGATCCTCataaagcagaaaacagaagAGCAGACGGCAGAAGGAAATGATGAAACACAGTCTGTCATTGAGAGTTTTGGAGGACGACGTCATTTTGTCGGACCGAACACGAAAGGGTCTCAGTTGGTAGAGAAACTTAAGAAGATGGTTGCGGAAAATAGTGGTGAATGCTTCACCACAGAGACACTGTTGGATGCACAGATGGAAAAACTGCAGAAATTTGAAGAAATGAAGAGGAGGATCCATTCGTTAGAGACGTGGTTTCAGACACAAGATTCAGGAACTAGAGAAGATGAACTGAGGATTGTACTCCTCGGAAAAACTGGGGTTGGGAAGAGTTCAACTGGAAACACCATCTTAGGAAGAGAAGCGTATATATCAGACCTTTCTGGAAGTTCTGTTACTAAAGTGTGTCAGAAAGAGACAGATGAAATCAACAGCAGACACATTACTGTGATTGATACTCCTGGACTTTTTGACACTGAACTCAGTAACGTGGAAATTCAGAGAGAAATCAGAAATTGCATCTCCATGATCCTGCCTGGACCACATGTGTTTCTCTTAATGATTCCTCTGGGAAGATTCACTCAAGAGGAAGAAAAATCGGTAAAGATCATCCGAGACACGTTTGGAGAAAACTCATTAATGTACACCATAGTGCTGTTTACCAACGGAGACCAACTGAAGAACAAAAGCATCGAACAGTTCCTGGAAAACTCTGGGATTGCTCTTAAAAACCTCATTGCTGAGTGTGGAAACAGATACCATGTGTTCAATAATGAGAGCAAAGACCGGACACAGGTGAATGATCTACTGCAGAAGATAGATGAAATGGTGAAAGCAAACGGAGGGAGTTACTACTCATGCAAGATGTTCagagagatggaaagagaaatacaagagaaacaaaagaagatacTGACTGAGAAAGTGGAGAACCTgaacagagaaaaagaagaattgatgaagaaacataaagaggagaaaagaaagTTGAAGACTAAGATGGAGGAAGAGcataacaaagagaaaaagagaagagaagaggaatTTAGAGAAAGAGAAGATCGATATAAAAGAGACATTAAAGACATAGAGgaacaaagagaaaaatcacGAGAAGAACTGAAGAGAGAACGAGAGGAATGGGAGAGACTGAAACAACAGGAAAGACAaaggagagaagaggaggatgagaaATTGAGAAAAAGAACAGGCGATGTGGAATGA

Function

NR:

description
PREDICTED: GTPase IMAP family member 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223842.1 True 1635 mRNA 0.42 4 3744546 3747804

Neighbor

gene id symbol gene type direction distance location
LOC122328131 NA coding downstream 26 3742247 ~ 3744520 (-)
LOC122327402 NA coding downstream 2624 3736141 ~ 3741922 (-)
LOC122327357 NA coding downstream 8556 3730511 ~ 3735990 (-)
LOC122327542 NA coding downstream 184732 3556132 ~ 3559814 (-)
LOC122327410 LOC107712173 coding downstream 429469 3309263 ~ 3315077 (-)
LOC122327546 NA coding upstream 136709 3884513 ~ 3887580 (-)
LOC122328145 NA coding upstream 149179 3896983 ~ 3898464 (-)
LOC122327439 NA coding upstream 156127 3903931 ~ 3905997 (-)
LOC122328146 NA coding upstream 162230 3910034 ~ 3916504 (-)
LOC122327408 NA coding upstream 194324 3942128 ~ 3951104 (-)
G149413 LOC107753735,LOC107704490,LOC107663689,LOC107755986,LOC107702613,LOC107704403,LOC107704499,LOC107566340,LOC107702610 non-coding downstream 23359 3720171 ~ 3721187 (-)
G149411 NA non-coding downstream 51625 3692157 ~ 3692921 (-)
G149136 NA non-coding downstream 157697 3586059 ~ 3586849 (-)
LOC122327595 NA non-coding downstream 165817 3576434 ~ 3578729 (-)
G149126 NA non-coding downstream 173104 3547465 ~ 3571442 (-)
G149435 NA non-coding upstream 80771 3828575 ~ 3829523 (-)
G149441 NA non-coding upstream 130975 3878779 ~ 3879910 (-)
G149447 NA non-coding upstream 180882 3928686 ~ 3929766 (-)
G149460 NA non-coding upstream 226359 3974163 ~ 4021597 (-)
G149461 LOC107602658 non-coding upstream 239600 3987404 ~ 4016094 (-)
LOC122328127 NA other downstream 92537 3644927 ~ 3652009 (-)
LOC122327341 NA other downstream 293117 3378032 ~ 3451429 (-)
LOC122327463 NA other downstream 300672 3424346 ~ 3443874 (-)
G149102 NA other downstream 329835 3388260 ~ 3414711 (-)
si:rp71-36a1.1 NA other downstream 378424 3325575 ~ 3366122 (-)
LOC122327411 NA other upstream 228127 3975931 ~ 4042369 (-)
G149491 NA other upstream 408688 4156492 ~ 4158981 (-)
LOC122327462 LOC107741386,LOC107698560 other upstream 524747 4272551 ~ 4281768 (-)
LOC122327456 NA other upstream 681001 4428805 ~ 4433500 (-)
LOC122327455 NA other upstream 735017 4482821 ~ 4486925 (-)

Expression


Co-expression Network