LOC122328145


Basic Information

Item Value
gene id LOC122328145
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3896983 ~ 3898464 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223852.1
ATGACTGTATTTGATGATGTTCTTgacgggagattcagagacagactgaagatgGACGATCAAaccggatctctgaccatcatgaacaccaCAATGAAACATGATGGATTTTACGGAATTAAGACCAACAATATGAGCAAGAGTTTCCTTCTCTCTGTCTATGATGAAATCCCACTGAAGGAGGGAGAATCAGTCACTCTAAACACTCATCTTACTCAAATAATGGATGATGATCAGATTCAGTGGAGACTTGGAAACTCTTTAATCGCTGAAATCAATGTAAGAGCTGACAGATTCACTGAAAatgatgatgttcttgacgggagattcagagacagactgaagatggacaatcaaactggatctctgaccatcatgaacaccaCAATGAAACATACTGGAGCTTATCAACTGCAGTTCAACCTTATGAGCATGCTTTTCTTCCTCACTGTCTATGATGATATATCAGTGaaggagggagattcagtcactctcaACTCTGATCTTACTCAAATAATGGATGATGATGTGATTGTGTGgatgtatataaatgaaaacaccgCCATACTTTCTCATATCAATAAACGGCTCAACATCATGACTACTCTGAACACTGCTGTGGTTTTACTGAAGCTGTGA

Function

GO:

id name namespace
GO:0044257 cellular protein catabolic process biological_process
GO:0051603 proteolysis involved in cellular protein catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223852.1 True 639 mRNA 0.40 4 3896983 3898464

Neighbor

gene id symbol gene type direction distance location
LOC122327546 NA coding downstream 9403 3884513 ~ 3887580 (-)
LOC122328132 LOC107570673,LOC107575767 coding downstream 149179 3744546 ~ 3747804 (-)
LOC122328131 NA coding downstream 152463 3742247 ~ 3744520 (-)
LOC122327402 NA coding downstream 155061 3736141 ~ 3741922 (-)
LOC122327357 NA coding downstream 160993 3730511 ~ 3735990 (-)
LOC122327439 NA coding upstream 5467 3903931 ~ 3905997 (-)
LOC122328146 NA coding upstream 11570 3910034 ~ 3916504 (-)
LOC122327408 NA coding upstream 43664 3942128 ~ 3951104 (-)
LOC122327340 NA coding upstream 144194 4042658 ~ 4046708 (-)
LOC122327368 NA coding upstream 182776 4081240 ~ 4089707 (-)
G149441 NA non-coding downstream 17073 3878779 ~ 3879910 (-)
G149408 NA non-coding downstream 24964 3684495 ~ 3872019 (-)
G149447 NA non-coding upstream 30222 3928686 ~ 3929766 (-)
G149460 NA non-coding upstream 75699 3974163 ~ 4021597 (-)
G149461 LOC107602658 non-coding upstream 88940 3987404 ~ 4016094 (-)
G149458 LOC107729910,LOC107702645,LOC107566368,LOC107702613,LOC107720998,LOC107573568,LOC107571164,LOC107707334,LOC107694566,LOC107698547,LOC107690518 non-coding upstream 120820 4019284 ~ 4054869 (-)
LOC122327593 NA non-coding upstream 139538 4038002 ~ 4039415 (-)
G149410 NA other downstream 18267 3691500 ~ 3878716 (-)
LOC122328127 NA other downstream 244974 3644927 ~ 3652009 (-)
LOC122327341 NA other downstream 445554 3378032 ~ 3451429 (-)
LOC122327411 NA other upstream 77467 3975931 ~ 4042369 (-)
G149491 NA other upstream 258028 4156492 ~ 4158981 (-)
LOC122327462 LOC107741386,LOC107698560 other upstream 374087 4272551 ~ 4281768 (-)
LOC122327456 NA other upstream 530341 4428805 ~ 4433500 (-)
LOC122327455 NA other upstream 584357 4482821 ~ 4486925 (-)

Expression


Co-expression Network