LOC122328160


Basic Information

Item Value
gene id LOC122328160
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4760030 ~ 4767528 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223866.1
AACCGTAACtttattaaatcttaattttgattagtaatatgcgtCGGGACTTCTGtcggacaactttaaaggcagttttctcagttttaagatgttttagaCCATCTAGATTTATCTCCCACACCATATCAACGCAAGGCTTCTTCGTTCAGCTTTCAGATAATGCATAGATCTCTCTGACCCTTGGGTTCAGGGGTTCAGGGCTCAGGTCCAGGTTCGTATATAATCATTTGCAGAATAAAGACCCCGCCCTGCTGCTCTGAGCCGCTGAGATGATTACTTTCACTTGCTGGAGAAACTGAGGGAAAGCGCGTCTTGACTTCACTGAACCTGCATCACGTTCttgcaaccaaaaaaaatgaagcatgtccttttttctctgtttttgttgtgtgttcgTGGGCATGATATAGTGCCAGTGACTGTAAcagagggagattcagtcacttTGTCAATAATGGATATTGAAACAATTCAACAGGAAGAAATTAGATGGTATTTTAATAGCTTTTGCTTTGCTGACACCACTGGAGATCAGAACAGTACAGATGTTCAGTGTGTTAATGATACAGAGATATTCAGAAACAGACTTAAGGTGAATAATATGACTGGAACTCTGACCATCACAGACACCagaaccacagactctggactttataaactacagatcagcaacagcagcagcagtcatCTTCAGGTCTTCAGAGTTTCTGTCTATAATGCTTCTCAACAAGACAAAACGAAGTCAGTGAAGGAGGGAGACTCTTTTATTTTAGATCCTGGTGTAGTGAATGCCACAAATTATTTGATGAAATGGATTTTTGACGGCATTCCTATTGCCGAAATCAGTGGAGATCTTAGTTTTAACTGTACAGATGTTCAGAGGAAGAATGGCACTGAGAGATTCAGAAACAGGCTGAAACTCGATCAGACTctatctctgaccatcatgaacaccagaaccacagactctggagATTATAAACTACAGATCATCAGCAAAAGATTCAGCATCATGAAGAGCTTCATTGTTAATGTCACTGgtTATGCTGAAGCAGAGAGAGTGTCAGTcgtggagggagattcagtcactctatACTCTGATGTGGAAACAATCCAACAAGAAAAGcttaaatggtattttaatgagATTCAAATCACTGGAATCACTAGAGACTCCAATGAAACTTGTACAAGTGTTCAGTGTAAAGAGAGACTAAAAGTGAAtcatcagactggatctctgaccatcacaaaCATCAGCaccacagactctggactttataAACTACAGATCAGCAGTGACAGTCTTCAACTCTTCagtgtttctgtcttttATGCTCCTGAACAAGATAAACTGAAGACAAAGTCAGTGAAGGAGGGAGAATCTGTCATTTTATATCCTGGTGTAGTGAACACAACAAATTATTCGatgaaatggatttttaatGACGTTCGCATCGCTGAAATCAATGGAGATCTTGGTTTTAACTGTACAGATGTTCAGTGTAATAATGGTACTGAGAGATACAGAAACAGGCTGAAACTGGAtcatcagactggatctctgaccatcatgaacaccacaaccacagactctggaGTTTATCAACTACAGATCAACAATAAAAGACTTAGCATCATAAGGAgcttcattattaaaatcactgTGAAGGAGGGAGAATCTGTCACTTTAGAcaatgtagaaataaaaaaaaccaaaaatatgatgaaatggTATTTTAAAGACACTCTCATCGCTGAAATCACTGGAGATCAGAGTCAGATCTGTACAGATGATGAGTGTAAaaagagattcagagacagactgaagctggatcatcagactggatctctgaccatcatgaacatcaAGACTACAGACTCTGGAGAATATAAACTACACATCAGCGACAGCAGCAGAATTAACATCATAAAGAGCTTCACCATCACTGTACATAAAATAGAGCACATACCTGATGTCCCAGCTAAGGAACTGGCTGTTTCAGAATCGGTTCTGCCTCCAGCCGCTGTAGCAGGAATATGTGTTGGTGTAGCTGTTCTGCTGCTCGTTGTTGCTGGGGTGATGTACTATCGCAAACATCAAGCAGAACAAAGTAGCCTTACGCTGCACTTCAATAATCAGatgaatggcACTGAAGACCCTGTTGATGACTCCTGCCAATGAATCATCTTCTTAATCCCACTGAAACCAAGGATGCTAATAAGACATCATGGtagcattatttttaaacgCTTTTACTGAAAGAAAAAGCGATGAAAAGCTGTAAAACAGCTAGATTTCAATATTCAGCACCAACACCAGTGTAAATTAATGCAATACCAATTTCATTACTTatcctaaataataaataaaaagtaggctacatgtatttttttaatgatgtaacATAGCTTCAGAAAAGCGAATTAGTAACTAAATAAGCAAACAGAGAAAGCCTGACCAGAAAGTTTCAAGTAGAAGATGAACAGTTAAAGTGGTTATGACATGCTATTTTAAAGGTCAATATTTGGTGTAACAAACATGCTTTAttgttcaaaaaacacattattatatactggattacacttttaaatgtatgtattgatGAGTATTAATTgcttactaaaatatttaattatgcaaatgtacaACAACTGTTTCACAAGCTTAGGTGCGCTTATTAAGCAAGGTGTAGGGTCTAGGAAGGgtgttttaatcacatttaaattagCTGTTCACAtgcaagaaagcaaaaaaacacatccaTCCAAGTTtgcttcttcatcagaacagatttggagaggTTTAGAACTAGATCACTtgttcaccaatggatcctctgcagtcaACTGAAACAAAACCGAACTGCATGCAGCAGCCTGGACATGAGCAGAAAACAAATACAGGAAACTCTTGATTATACTACTTAACCAAACAAGAACAACCACAAAGGACCACAAACACTGCACAGGAAACAGGAAGAGAACTGGGAAAATGTAATATgacctgatgaagaaacaaactcgtcgACGTcttggatggcttgagggtgactACATTTCCAgcacatttgaatttttttatttcaccgTCTTTTTACTGGTGACAACAATACGCATTTAATATTGTAACGCGCGCATACGTATTGGTATCTTTAGATATATTCACAAGACAATTGTGCATCAtgcttatttttgtaaatgttttcagaaaagTCACTGCACTGTCGGAGCCGATGCGCTGTAATATGCCtcctcacaaaaataaaataataatcagcgTCATTTCTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223866.1 True 3297 mRNA 0.38 9 4760030 4767528

Neighbor

gene id symbol gene type direction distance location
LOC122327350 NA coding downstream 2598 4750241 ~ 4757432 (-)
LOC122327323 NA coding downstream 14073 4738382 ~ 4745957 (-)
LOC122327429 NA coding downstream 54171 4701963 ~ 4705859 (-)
LOC122327345 NA coding downstream 62735 4691094 ~ 4697295 (-)
LOC122327393 NA coding downstream 81313 4649573 ~ 4678717 (-)
LOC122327538 NA coding upstream 3050 4770578 ~ 4772743 (-)
gpd1b gpd1b,LOC107698578,LOC107721242,LOC107727040,LOC107694423,LOC107566434 coding upstream 6279 4773807 ~ 4777213 (-)
smarcd1 smarcd1,LOC107698569,LOC107694342 coding upstream 10455 4777983 ~ 4785215 (-)
asic1b asic1b,asic1,LOC107569540,LOC107727129 coding upstream 23019 4790547 ~ 4830499 (-)
LOC122327307 NA coding upstream 248563 5016091 ~ 5021442 (-)
G149594 NA non-coding downstream 78954 4679919 ~ 4681076 (-)
G149598 NA non-coding downstream 88260 4662075 ~ 4671770 (-)
G149592 LOC107729908,LOC107712186,LOC107702610,LOC107702613 non-coding downstream 134125 4625597 ~ 4625905 (-)
G149587 NA non-coding downstream 145145 4614307 ~ 4614885 (-)
G149586 NA non-coding downstream 148757 4610930 ~ 4611273 (-)
G149955 LOC107698556 non-coding upstream 164921 4932449 ~ 5041927 (-)
G149956 NA non-coding upstream 171907 4939435 ~ 4939839 (-)
LOC122327586 NA non-coding upstream 189873 4957401 ~ 4965773 (-)
G149962 NA non-coding upstream 224082 4991610 ~ 5003689 (-)
G149963 NA non-coding upstream 224433 4991961 ~ 4999176 (-)
LOC122327545 NA other downstream 23170 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 171608 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 273105 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 326530 4428805 ~ 4433500 (-)
LOC122327462 LOC107741386,LOC107698560 other downstream 478262 4272551 ~ 4281768 (-)
LOC122327354 NA other upstream 378398 5145926 ~ 5153856 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 759702 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 771028 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 870610 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 894213 5661741 ~ 5672809 (-)

Expression


Co-expression Network