LOC122328170


Basic Information

Item Value
gene id LOC122328170
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5471936 ~ 5480859 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223875.1
tcaatgaCTGCAATTTAACTACATTAGGATGATAATACATATGTTGCTAATAAACATCATCTCCATCAAAAATAGAtcataatgtgaaaaaaagacgatatttatatatgcacagtatgttaattagttttaaaaagcaAGTACTGTTTACTAATTGGTTGGATATATAAAGACAGGCAGCTTGTTTAAAGCCTGTGAATTACTGAAAGCATTCGTTTGATAATCTGTGCTGTATTTATGACtgatttatgtttgtttttggcaGTTTTGCTCGTCCTTTCTCACAGTGGAGCTCTTCCCACAGGTCTTAATGCTGAATGTTCCCACGAGTAAAGACGACAGAGTTGGCGAACATAACGACAAAATAACATGAATGATCCAGAAACCTGCAGAATTAAACCGGAAGATACCGAAGAACCAATAGGGCCGTTGCAATTGAAAAAGGAGATTGAAGAACTGTCTGAAGCTGAAGAGGAGCATCATgtcaaaactgaagaaaaatcATTAACCCCTTTGAGTCCTAACAAAATATGTTTCGCTTGCCCTATGTGTGAAAAGAGTTTCTCGTGTAGGCAAAATCTTGATCTTCACATTAAATTTCATCGCGGAGGGAAGCCTTATGCATGCGAGCAGTGCGATATGATTTTCACAATAAAAGGGAACCTTAATGAACACGTGAAAATTCACGCCGCAGAGAAGAAACACATCTGtgatcagtgtgggaagagCTTCCCGCAAAAACGAAACCTCGATGAACACGAAAAAATCCACAGCCTGGAGAAACCGTACGCATGCGATCGATGTGGGAAGAGTTTCCCATTTAAAGGAAACCTCGACGAACACgtgaggatccacaccggagagaggcCGCACAAatgtgatcagtgcgggaagagcttcgcACAAAAAGGAAACTTTAACGTACACATGAAAATCCATACTAGAGGGAAACTTCACGCGTGTGATCAAAGTGGGAAGAGCGTCACACTAAAAGCATCCTTTAATGAACGCGTGagaatccacaccggagagaaaccgcacacgtgtgatcagtgcgggaagagtttcactCAAAAAGGAGCTCTTAACGAACACATGAATATTCACACCGGAGAAAAACCACACAActgtgatcagtgcgggaagagttaCGCACGAAAAGGAGCGCTTAATGATCACATGAAAGTCCACACCGGAGAAAAGCCGTATACTTGTGATCAATGCGGGAAGAGTTTCATAAAATCAGGTGTTTATAAAGTACATCTGCTTACTCATTCTAGAGAAAGGCTGTATAGCTGTGACCAGTGCGGTAAAAAGTTTTTTAGGGCAGATTTCCTGAAGGACCACCTGAAAGTTCATACAAAGGAGAAGCCTTTTGTATGTTAtttgtgtggaaagagttttaccCAAAAGGGTGCATTAAAACTACACCAGATAAGACACAGCGGCGTGAAGGATCATGCTTGCTCTGAGTGTGGGAAGACTTTTTTTACAGATAGTGCCCTGAAGGTGCACCAGACAGTTCACTCTACAGAAACACCTTtcaagtgttcacactgtgacaagagCTTCAAACGTCCAGAATATCTGAAAATacacgagaggatccacaccggagagaaaccgtacaCGTGTGATGAGTGCGGGAGGAGCTTTAGATTAAAAGGAACCCTTAACGAACACATGCAGactcacaccggagagaagccgcaCACGTGCGATCAGTGTGGGAAGTGTTTTGCACAAAAAGGAAACTTTATTGTACACATGAAAATCCACACTGGAGTGAAGCCATATGCATGTGATCAATGTGGGAAAACCTTTGTGCATAAAGGAAACCTTAACGCACACATAAAAACCCACACTGGAGTGAAACCGCACAcgtgtgatcagtgcgggaagagttttgCACAAAAAGCACCCCTTAATGATCACATGACAATCCACGCCGGAGAGAAGCCGCACACttgtgatcagtgcgggaagagtttcagaAAATCAAAAGTACATACGTGTACTCATTATAGAGAAAGACATTATAGCTGTGACCAGtgcagtaaaaaatattttagggcAGATTCCTTGAAGGACCACCTGAAAGTTCATACAAAGGAGAAGCCTCACGTGTGTTCTTTGTGTGGAAAGAGTTGTAGTAACGCTGGATACATTAAAATCACACCAGAAAAGACACAGCGGTGTGAAGGATCACGCTTGCTCTACGTGCGGTacttGATCAAAGAGAATGAGGAGACGGAAGACCCGAAACACCATCACGTCAAATCTTTGATTCGCTCGCAGGCCGAGACGTTTTTTTCCGTAAAAAGAGTATCCAAGAAATCTTTCACCTGCCTGCAGTGCGGCAAGAGTTTCAGACATAAAAGAAACCTTAGTGGACACATGCatattcacaccggagagaaacaaCACACTTGTGatcagtgcggaaagagtttgAGACATAAAAGAAACCTTAATGAACACATGAAggtccacaccggagagaaaccgcaCACGTGTGaccagtgcgggaagagtttcagGCATAAAAGAAACCTTAATGAACACATGaaaatccacaccggagagaagccgcaCACGTGTGaccagtgcgggaagagtttcagaCATACAGGACACCTTAACGATCACATGAAAATCCACACCGGGGAAAAGCCGCACACGTGCGGTCTCTGTGGGAAGAGTTTCGCGCATTTGAGTACTTTGAAATCGCATCTGAATTCTCATTCTGGAGAAAGACAATATATGTGTGATCAGTGTGGCAAGAACTTTTCTTGGGCGAATTCCCTGAAGGACCACCTGACGGTTCATTTAAAGGAGAAACCTCACGTGTGCCCtttgtgtggaaagagttttagcCAGCTGAGTTATTTAAGAAAACACCAGCAAAGACACAGCGGCGTGAAGGATGTTCTTTGATCGCGGGAGGACCTTCATTACGGTTGATGAACTGAAACGGCACTAGAGGAGTGGTCAGGAAACCCGAGATCATCGAGAATCTACAACGGCGAGAGTCGTATCACTGCCTTCCACGTGGGAAAAGTTTCCCCCTTTATAATTAAAGACGAAAAAAatggtctgaaatcattaaaatcatGTCTAAGTTTATCTAAAGATCCAGCTCGTTTGTTCAATGATTttattaggatttttttgtattatattacaatattatggtttaaatatttatgaatcattgctcattatttcatgcttttaaacATATTGGAAGCCATTAAGTGTTAAACGAGCAGACGCAGATACTGAATGGTGCAAACAAACATTGTATTATAAGCTGTTATACAAATGAAAGCGTTATTTCCCAGAATAATCACAAGTCTAAGATTTAAGTTTTGTTGTGAAAAGATGAATCGACTCTTTCTCAGATCTGGGCAGAATAATTAAGCGGTTAGTTCACCCTAAAAAGGAAATTAgcacattatttactcaccctaggTGTATAAAACTTCCTTCTTTCAGACGAAACCCAATCaaggttatattaaaaattgccctggctcttccaagctctATTAACGAAATGGGGGTGTTTATTGTTAACAGTCCAAAATAAATCCAATAAagtgcattcatttataaaaaagtaaa

Function

GO:

id name namespace
GO:0047173 phosphatidylcholine-retinol O-acyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223875.1 True 3627 mRNA 0.41 3 5471936 5480859

Neighbor

gene id symbol gene type direction distance location
LOC122327381 NA coding downstream 37793 5430855 ~ 5434143 (-)
LOC122327375 LOC107570603,LOC107690762 coding downstream 93049 5373452 ~ 5378887 (-)
LOC122327304 LOC107570597,LOC107658377,LOC107711545 coding downstream 98128 5355545 ~ 5373808 (-)
LOC122327319 NA coding downstream 116823 5351215 ~ 5355113 (-)
LOC122327308 NA coding downstream 120367 5336724 ~ 5351569 (-)
LOC122328171 NA coding upstream 849 5481708 ~ 5490754 (-)
LOC122327326 NA coding upstream 11231 5492090 ~ 5496079 (-)
LOC122327491 NA coding upstream 42379 5523238 ~ 5525432 (-)
rdh5 rdh5,LOC107573570,LOC107653177,LOC107586996,LOC107745400 coding upstream 52337 5533196 ~ 5536573 (-)
rbck1 LOC107658397,LOC107745403,LOC107653168,LOC107573567,LOC107586913,LOC107720991 coding upstream 69770 5550629 ~ 5558239 (-)
G150086 LOC107586973,LOC107676140,LOC107698552,LOC107712186,LOC107658401,LOC107676139,LOC107681664 non-coding downstream 1428 5418456 ~ 5470508 (-)
G150093 NA non-coding downstream 17604 5451436 ~ 5454332 (-)
LOC122327610 NA non-coding downstream 162046 5308250 ~ 5309890 (-)
G150071 cacna2d2b,LOC107558272,LOC107653164,LOC107720977,LOC107655410 non-coding downstream 168698 5302860 ~ 5303238 (-)
G150060 NA non-coding downstream 195194 5273557 ~ 5276742 (-)
G150092 LOC107658400 non-coding upstream 17082 5497941 ~ 5506152 (-)
G150121 NA non-coding upstream 27711 5508570 ~ 5512967 (-)
G150161 tbc1d20,LOC107658381,LOC107586998,LOC107573569,LOC107653176,LOC107720987 non-coding upstream 64409 5545268 ~ 5545768 (-)
G150125 LOC107586915,LOC107745408,LOC107658396,LOC107721006,LOC107593072 non-coding upstream 98611 5579470 ~ 5583041 (-)
G150184 NA non-coding upstream 123298 5604157 ~ 5604418 (-)
LOC122327354 NA other downstream 318080 5145926 ~ 5153856 (-)
LOC122327545 NA other downstream 735076 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 883514 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 985011 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 1038436 4428805 ~ 4433500 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 46371 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 57697 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 157279 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 180882 5661741 ~ 5672809 (-)
LOC122327537 NA other upstream 277147 5758006 ~ 5763982 (-)

Expression


Co-expression Network