LOC122328171


Basic Information

Item Value
gene id LOC122328171
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5481708 ~ 5490754 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223877.1
cccagccaccctacggaggaaactcattttggccgcttgtatctgggatctcatcctttcggtcatgacccaaagctcatgaccataggtgagagtataGGAATGAAGATCGATTGGTCTttaccatgacagaccagtacagcgaccgcattactgcagaagctgcaccgatccgtctgtcaatctctcgttccatccttccctcactagTGAACAAGACTCCAAGATACTTatactcctccacctgaggcaggagctccccaccaacctgaagggggcaagccacttttgtccgactgagaaccgtggcctcagacttagaggtgctgattctcatcccagccgcttcacactcagctgcaaaccgccccagcgcacactgtaggtcttggccagatgcagccaacaggacaacatcatccgcaaaaagcagagacgatatcctgtggtcaccaaaccggCCCCCGAAATCCTGTCcatataaataatgaacaggaaTGGTGACAAAGGGCAGAGTTAATAACATTTAGTAATATCATCTTCTTGTTTTTGGTTGAgggaatcattctaatatttaaaagcCACACTCTATAAACTACTAAAATATAGGCTATTCGAAGTAAGTAGGCTAGTATACTAGTTCTATCATCACGCCCTCTTTTTGAACGTGATTATTTTCATTGGGGAGGGGTTGAAGCTCCTCCCACAGCGATTTAAatcaagtctgctttattgtcaaatTTACTAGTAAATGCTGGAATATTCCCCCCAGTTTACAAGCAAAGACGATTGAAAGAAGTTTGTGAACATGATACTGAAGAACAAAGATATAGTTGTTTGAAATTgagtgatattttaatattgatatgGGAAAAACCGTTGCACGTGGTGCTGGAACGTTTTCGATCAAATTCGAAAATgtctaatgtatttttttttgtaaaaattacgTTTTCATTCAATTGTTTTTCAGTAACATCTCGTCTCTGAAAATATATTGACAAACATCACATGTTTGGTGTAGAAAAATAGCGATTGCCTTAAATAGCGGTGTCTTTCTTTTATGGACACGCTGCGCTTTCTCTTAACGTCGCAAAacgttattatttatttatattaatatcgcgagattttaaaataattttactttttagacCTGACGGAAGACAATAAGGAGAGTGAAGAACTGAATTATAACTGGttctttacaaaataaacatcgCTTCGTGTAAGTTATATAGGCTAGTATAAAACCACTATCCAAAAGAGCAATCATcggatattttaatatttctcacTACggaaaaatgactgaaataaaatatgaagcgTTGGCGATAGGTGGCGGTAATACACTTCCGTGTCTACGATCTGAcgtaaaagaagaagaagactaCGTCGCCACTGACGTCATCAGTCAGCGCTGGGTTTCTGAGCAGTGCAGCGTTTTGACAGAGGTTCATCGCTAAATGCTGGAATATTTCAATTACTAAAAGTAAAGAAGCttacatttgtgaaagaaacttaaaaacatgaatgatcCAGAGCCCTGCGgaataaaacaagaagaaactGAGCCACAAATAGACCTGTTTGAAGAGAGCAAGGAGACTGAAGCGGGGGAGAAACATCATGTCAAGACTGAAGAAACATCTTCACCGAAAAACGACAATACGTGTTTCGCTTaccctcagtgtggaaagagtttctcATGCAAGCAAAATCTGGACCTTCACATAAAATGTCACAGTGGGGGGACGCTGTATGCTTGTGAGCAGTGCGGTGAGATTTTCGCAATAAAAGAAAACCTAACCGAACACATGAAAATCCACACCGCAGAGAAACCGCACACGTGTGATCGGTGCGGGAAGGGTTTTTCCAAAAAAGGAAACCTTAACGATCACCTGAAagtccacaccggagagaagccgttctCATGcgatcagtgcgggaagaggTTCTCGGTTAAAAGCAACCTCAACAAACACGTAaaaatccacaccggagagaaaccgcacacgtgtgatcagtgcgggaagtGTTTCGCGCATAAAACAAACCTTAATAATCACATGAcaatccacaccggagagaagcggCACAcgtgtgatcagtgcgggaagaaTTACTCGCGAAGAGGAGCCCTTAATTTCCACATGAAAGTCCACACCGGAGAAAAGCCGTACACttgtgatcagtgcgggaagagtttcagaCAATCAAGTGTTTATAAAGTACATCTGCTTACTCATTCTAGAGAAAGGCTGTATAGCTGTGACCAGTGCGGTAAAAAGTTTTTTAGGCCCGATTACTTGAAGGACCACCTGACAGTTCATACAAAGGAGAAGCCTTACGTGTGTTCtttgtgtggaaagagtttcaggCAGATGTGTGCTTTAAAGATACACCAGAAAAGACACAGCGGCGTGAAGGATCACGCTTGCTCTGAATGTGGGAAGACTTTTGTTACAGAAAGTGCTCTGAAGGTGCATCACACAGTTCACTCTACAGAAACGCCTTtcaagtgttcacactgtggCAAGAGATTCAAACGATCAGCGTATCTACAGATACACGAGAGggtccacaccggagagaagctgTACGCGTGTGATGAGTGCGGGAGGAGCTTCACTCATTTCTCTTCTCTATCcagtcataaaaatgcatgtctgtctgtcagtcatgtTGGTCACCGATGGTATATACAGTTTTATAATGTTTCCAGTTtctcaatttttcattttaggtttacGTTGAGTTCAGTAGGTGGCGGGAACGCACCATTTAAGTTGGTTGACCTACCGCCcgtgaaaaacaaagaaagacgACAATCAGCGGAATTCACCTATAAATGTTGGAATATTTCCATTAGTTTAAAAGTGAAGACAGTTCATGGTAGAAGAGTGAGGACAAAAGTGATTCACAACCCCCGAAGAACGGTAAAGGAGCATACTGAAGAACGAATAGACCTGATGGAAGAGAATGAGAAGAACGAAAAACCGAGTGAAGCAGAGGAGAAACATCACGTTGTTAAGTTCGGAAGAAAATCTTTGAGTTCCTCACCGACTGAAAGCAATTCGTTGAAACGAGGAGCCGGAACATCTTTAACCTGCCCTCTGTGTGGAAAAGGTTTCATGAACAAACACACTGTTAAAGTTCACATGAcaatccacaccggagagaggcCACACGcgtgtgatcagtgcgggaagagtttcacacaaaaatgcGTACTTAAGGAGCACGCGAAAATCCACACCGGAAAAAGACCCTACACGTGTGATCAGTGTGGTAAAGGGTTTCTTAGGACAGGCGCCCTGAATAACCACCTGAAAGTTCATACGCAGGAGAAGCCTCACATATGTTCtttgtgtggaaagagttttagtGAGCTGGCTGCTTTAAAGAAACACCAGAAAAGACACAGCGGTGTGAAGAACCACATGTGCTTTGATTGTGGGAATGTCTTTTTTGATAGCGCTCAACTGAGACGCCACCAGAGAACACACACTGGAGAAAAGCCTTACAAGTGTTCACATTGTGACAAGAGATTCAGTCAGTCAGAACATCTGAAAACACACGAGAGggtccacaccggagagaggcCTTTCACttgtgatcagtgcgggaaaCGTTTTGCCCGAAAAGGACACCTGAAGGGTCACATGAAagtccacactggagagaagccgtaTCTCTGCTCTCGGTGCGGGCAGCGTTTCGCCTGGTTAAATTCGCTGCGCAGTCATACAAAAGACAAATGCCTGAAATGAGTTCATCAGTTCATCTTTAGATCACTTAAGTGCCATGCTTGCATTAATCCCAGTCTTATCATTAAACAATTTGTAGatttataattatgaaatgcaaatgacGATTTATGAATGCTTTTTGATGTTGAAGTTCCTAAATGCctaataaatgatatttcacCTCGGAGA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223877.1 True 3944 mRNA 0.43 6 5481708 5490754

Neighbor

gene id symbol gene type direction distance location
LOC122328170 NA coding downstream 849 5471936 ~ 5480859 (-)
LOC122327381 NA coding downstream 47565 5430855 ~ 5434143 (-)
LOC122327375 LOC107570603,LOC107690762 coding downstream 102821 5373452 ~ 5378887 (-)
LOC122327304 LOC107570597,LOC107658377,LOC107711545 coding downstream 107900 5355545 ~ 5373808 (-)
LOC122327319 NA coding downstream 126595 5351215 ~ 5355113 (-)
LOC122327326 NA coding upstream 1336 5492090 ~ 5496079 (-)
LOC122327491 NA coding upstream 32484 5523238 ~ 5525432 (-)
rdh5 rdh5,LOC107573570,LOC107653177,LOC107586996,LOC107745400 coding upstream 42442 5533196 ~ 5536573 (-)
rbck1 LOC107658397,LOC107745403,LOC107653168,LOC107573567,LOC107586913,LOC107720991 coding upstream 59875 5550629 ~ 5558239 (-)
stab1 stab1,LOC107745410,LOC107658393,LOC107653171,LOC107721010,LOC107593096 coding upstream 116290 5607044 ~ 5634799 (-)
G150086 LOC107586973,LOC107676140,LOC107698552,LOC107712186,LOC107658401,LOC107676139,LOC107681664 non-coding downstream 11200 5418456 ~ 5470508 (-)
G150093 NA non-coding downstream 27376 5451436 ~ 5454332 (-)
LOC122327610 NA non-coding downstream 171818 5308250 ~ 5309890 (-)
G150071 cacna2d2b,LOC107558272,LOC107653164,LOC107720977,LOC107655410 non-coding downstream 178470 5302860 ~ 5303238 (-)
G150060 NA non-coding downstream 204966 5273557 ~ 5276742 (-)
G150092 LOC107658400 non-coding upstream 7187 5497941 ~ 5506152 (-)
G150121 NA non-coding upstream 17816 5508570 ~ 5512967 (-)
G150161 tbc1d20,LOC107658381,LOC107586998,LOC107573569,LOC107653176,LOC107720987 non-coding upstream 54514 5545268 ~ 5545768 (-)
G150125 LOC107586915,LOC107745408,LOC107658396,LOC107721006,LOC107593072 non-coding upstream 88716 5579470 ~ 5583041 (-)
G150184 NA non-coding upstream 113403 5604157 ~ 5604418 (-)
LOC122327354 NA other downstream 327852 5145926 ~ 5153856 (-)
LOC122327545 NA other downstream 744848 4707874 ~ 4736860 (-)
LOC122328156 NA other downstream 893286 4585143 ~ 4588422 (-)
LOC122327455 NA other downstream 994783 4482821 ~ 4486925 (-)
LOC122327456 NA other downstream 1048208 4428805 ~ 4433500 (-)
gls2b gls2b,LOC107658399,LOC107745412,LOC107653170,LOC108431573,LOC106566158,LOC105007068 other upstream 36476 5527230 ~ 5532809 (-)
bloc1s1 bloc1s1,LOC107573571,LOC107653169,LOC107745401,LOC107658402,LOC107720994,LOC107586997 other upstream 47802 5538556 ~ 5542080 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other upstream 147384 5638138 ~ 5652159 (-)
nol8 LOC107586918 other upstream 170987 5661741 ~ 5672809 (-)
LOC122327537 NA other upstream 267252 5758006 ~ 5763982 (-)

Expression


Co-expression Network