LOC122328173 (LOC107708183,LOC107753648,LOC107696926,LOC103909885)


Basic Information

Item Value
gene id LOC122328173
gene name LOC107708183,LOC107753648,LOC107696926,LOC103909885
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6096110 ~ 6097823 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223879.1
ATGGGTGAGGTTCTGGAAAAGACTGTAAAGCAACCCAGTGATGCCAATGCATACCGACGCCTGCGCACGTTTTCAGCCATAGTTCCTACCCCCCCAGGAGAGGAGAATATGGAAACCTGGATTGAACAAGCAAGGCTTATGATAACGGAGTGTGAGTgctctgaaaagaaaaaacgaCGACACTTAATTGTAGAAAGCCTGAAGGGACCTGCTCTGGAGATCATAAGAGCTGTCCGGTTTTCAGATCCTGAGGCGAGTGCCCTGCAGTACTTGGAAGCATTAGAGAGCACATTCGGCACCTCCGAGTCTGGTGAGGACTTGTATTTCAAGTTTCGTCTCATGCGTCAGAACACTGGAGAGACCCTCTCTGAATTCCTGCGAAGGATAGAAAAGATGCTCAACAAAGTTGTAGAACGTGATGGATTAACTCCAGGACTAGTGGATAAAGCACGAATTGAACAGTTAGTTCGAGGGGCCGTGAATTCCGACATGATGTTGCTCCAGCTACGgctaagagaaagaaaaaatcacCCACCTTCTTTTCTTAGTCTACTGAAGGAGATACGGGAGGCAGAGGAGAGTGAGGCATCTCGCCACAGGATGTCTGTTAAAGCCAAAGCTATACATTTTCATGAAGAAGAGAGAACCAGCACCTCTGTCATCCAAGAACTCAAGGCTGAGATTCAAGAGTTAAGAACACAAATATGTGGAGGTGAGTCCAAAACAGTGTCTACTTCATCCCTTGTaattaaaccaaaagaaaaacagataaagAATGAAACAACTGACAATGCTGAAGTCCAAGAGTTAAGAAAACAGATCGAAAATTTGCAGCAGCAGTTGACCATTATGAGTGTTAGCTCTACTCACCTCTCACATCAAGTTCCCGAGAGGCAGCCAAAACCTTCCACTTCGTACATGTCCCTGAAAGGCAAAGTAACAAGAACAAGAGATGATTATTTCTGCTACAGATCAAAGAGTGAGAAGTATGAGACTAGCGACAACAGCAGAAAAGCCCAGAACCAAGCCTGTTTCTCCAAAAAGAGTCAGACAGACATCAGTGAGTCCAGCAGTCTTCCCAAAGGCCTAGTTGGACCGGCATCTACTGTGGAAGTGAAGCTTAATGGACATGTATGTCAAGCCCTGTTAGATACCGGATCACAGGTGACGATCGTGTTTGACAGCTGGTTTTCCAGGAATCTCGCTGATGTGCCCATTCACCCCCTGACTGGATTGTCAATATGGGGCCTCAGCTCATCCAATTACCCATACAAGGGGTATATAGTTGTCGATGTCACTTTCCCTGTTTCTGTAACTGGAGTGGAAGAGTCACTGTCCATTCTGGCCCTCGTATGCCCTGATCCTCAAGGTCCTCCCCAAGTGCCAGTTATAATTGGTACTAATGCCAGTTTCTTCAAACGTCTCACAGCTTTCAGTCATGATACTGAAGGATCTAGTGCTGCACATGTTTTGAGAATCCAAAGCAAACACCCTGCAATCCATCTGACTCGGAAGCAAGAGACGAAAACTCCTCTTGACAAGCCCGAAGGAAAGGTTTGTTGGACAGGACCTGGTAACTGTGTAGTTCCATCACGGGAGAAGTATGTGCTCTCTGTAAAATGGTGA

Function

NR:

description
PREDICTED: paraneoplastic antigen Ma1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223879.1 True 1626 mRNA 0.46 2 6096110 6097823

Neighbor

gene id symbol gene type direction distance location
atp6ap2 atp6ap2,LOC107663666,LOC107745967 coding downstream 79301 6011435 ~ 6016809 (-)
insrb insrb,LOC107695633,LOC107586934,LOC107704428,LOC107593049 coding downstream 111667 5927516 ~ 5984443 (-)
arhgef18b arhgef18,LOC107695632,LOC107593089,LOC107586933,LOC107755984,LOC107704429 coding downstream 173620 5882826 ~ 5922490 (-)
sass6 sass6,LOC107756018,LOC107695611,LOC107731314 coding downstream 249180 5839748 ~ 5846930 (-)
LOC122327539 NA coding downstream 303056 5789815 ~ 5793054 (-)
mid1ip1b mid1ip1b,LOC107756028,LOC107663600,LOC107704421,LOC107593044,LOC107745972,LOC107586944 coding upstream 88146 6185969 ~ 6187727 (-)
tspan7b tspan7b,tspan7,LOC107586946,LOC107756029,LOC107745974,LOC107704418,LOC107593043 coding upstream 92251 6190074 ~ 6216614 (-)
slc26a11 slc26a11,LOC107663565,LOC107756030,LOC107745975,LOC107593041,LOC107704413,LOC107586945 coding upstream 124039 6221862 ~ 6231174 (-)
gnav1 gnav1,LOC107756032,LOC107745977,LOC107663576,LOC107586948,LOC107704417,LOC107593084,LOC106591843,LOC108259514 coding upstream 140534 6238357 ~ 6271357 (-)
pcyt2 pcyt2,LOC107745976,LOC107756034,LOC107704410,LOC107593040,LOC107586950,LOC103356210,LOC105905797 coding upstream 174630 6272453 ~ 6282129 (-)
G150234 tmprss9,LOC107704409,LOC107731339,LOC107593090,LOC107695615,LOC107586983 non-coding downstream 240943 5854785 ~ 5855167 (-)
G150233 NA non-coding downstream 241707 5854201 ~ 5854403 (-)
G150232 NA non-coding downstream 244220 5851285 ~ 5851890 (-)
G150152 NA non-coding downstream 272197 5822929 ~ 5823913 (-)
G150126 wu:fb55g09,LOC107587000,LOC107755988,LOC107704455,LOC107720989,LOC107658378,LOC107593068 non-coding downstream 440734 5654051 ~ 5655376 (-)
G150271 NA non-coding upstream 47055 6144878 ~ 6155016 (-)
G150273 NA non-coding upstream 59674 6157497 ~ 6183901 (-)
LOC122327580 NA non-coding upstream 215352 6313175 ~ 6314227 (-)
G150216 krt97,krt96,LOC107663680,LOC107745983,LOC107593038,LOC107739339,LOC107580444 non-coding upstream 246316 6344139 ~ 6345150 (-)
G150322 NA non-coding upstream 279864 6377687 ~ 6381972 (-)
use1 use1,LOC107756022,LOC107745970,LOC107593088 other downstream 103352 5989497 ~ 5992758 (-)
timm13 timm13,LOC107587003,LOC107731338,LOC106573564,LOC107593051 other downstream 234778 5859347 ~ 5861332 (-)
LOC122327537 NA other downstream 332128 5758006 ~ 5763982 (-)
nol8 LOC107586918 other downstream 423301 5661741 ~ 5672809 (-)
nisch nisch,LOC107586977,LOC107593071,LOC107653160,LOC107755997 other downstream 443951 5638138 ~ 5652159 (-)
G150276 npb,LOC107587005,LOC107663585,LOC107756033,LOC107704419,LOC107593099 other upstream 138429 6236252 ~ 6236865 (-)
gcga gcga,LOC107755995,LOC107663711,LOC107593098,LOC107704412,LOC107586984 other upstream 184633 6282456 ~ 6285580 (-)
G150440 r3hdm1,LOC107739334 other upstream 417742 6515565 ~ 6659352 (-)
cep70 cep70,LOC107739332,LOC107576760,LOC107653595,LOC107754238,LOC107576761,LOC107687877,LOC107587009,LOC107600947,LOC107682686 other upstream 616971 6714794 ~ 6728690 (-)
glsa glsa,LOC107754246,LOC107600978,LOC107739327,LOC107653599,LOC107586966,LOC107687871 other upstream 724380 6822203 ~ 6939000 (-)

Expression


Co-expression Network